Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00004 and BSU00040
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:15:49
# Commandline: needle
# -asequence dna-align/BSNT_00004___recF.1.22522.seq
# -bsequence dna-align/BSU00040___recF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00004___recF-BSU00040___recF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00004___recF-BSU00040___recF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00004___recF
# 2: BSU00040___recF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1113
# Identity: 1107/1113 (99.5%)
# Similarity: 1107/1113 (99.5%)
# Gaps: 0/1113 ( 0.0%)
# Score: 5511.0
#
#
#=======================================
BSNT_00004___ 1 TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGC 50
|||||||||||||||||||||||..|||||||||||||||||||||||||
BSU00040___re 1 TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGC 50
BSNT_00004___ 51 TGAACTTCAATTTGAAAATAAAGTAAATGTGATCATCGGAGAAAACGCCC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 51 TGAACTTCAATTTGAAAATAAAGTAAATGTGATCATCGGAGAAAACGCCC 100
BSNT_00004___ 101 AGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 101 AGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAA 150
BSNT_00004___ 151 TCGCACCGGACATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 151 TCGCACCGGACATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTA 200
BSNT_00004___ 201 TGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCGATCCCGATGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 201 TGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCGATCCCGATGC 250
BSNT_00004___ 251 AGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 251 AGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAA 300
BSNT_00004___ 301 CAGCAAAAGCTCAGCCAGTATGTCGGGGCCCTCAACACCATTATGTTCGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 301 CAGCAAAAGCTCAGCCAGTATGTCGGGGCCCTCAACACCATTATGTTCGC 350
BSNT_00004___ 351 GCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 351 GCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT 400
BSNT_00004___ 401 TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTT 450
||||||||||||||||.||||||||||||||||||||.||||||||||||
BSU00040___re 401 TTCTTGACATGGAAATCGGACAGGTTTCTCCCGTCTACCTTCATGATCTT 450
BSNT_00004___ 451 TCTCTTTACCAGAAAATCCTTTCCCAGCGGAATCATTTTTTGAAACAGCT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 451 TCTCTTTACCAGAAAATCCTTTCCCAGCGGAATCATTTTTTGAAACAGCT 500
BSNT_00004___ 501 GCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 501 GCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATC 550
BSNT_00004___ 551 AGCTTATAGAAGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACA 600
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 551 AGCTTGTAGAAGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACA 600
BSNT_00004___ 601 GCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCATCTCAAGAGG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 601 GCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCATCTCAAGAGG 650
BSNT_00004___ 651 GCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATC 700
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU00040___re 651 GCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGATGTATCAGATC 700
BSNT_00004___ 701 CCCTAGATTTGTCGAAAATAGGAGATAGCTATCAAGAAGCGTTTTCTAAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 701 CCCTAGATTTGTCGAAAATAGGAGATAGCTATCAAGAAGCGTTTTCTAAA 750
BSNT_00004___ 751 TTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 751 TTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG 800
BSNT_00004___ 801 CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 801 CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTT 850
BSNT_00004___ 851 CTCAAGGACAGCAGCGAACGACGGCGTTGTCCCTTAAGCTGGCGGAGATT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 851 CTCAAGGACAGCAGCGAACGACGGCGTTGTCCCTTAAGCTGGCGGAGATT 900
BSNT_00004___ 901 GACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 901 GACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGA 950
BSNT_00004___ 951 TGTACTGAGTGAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 951 TGTACTGAGTGAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGA 1000
BSNT_00004___ 1001 TCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGTTGATGGCATT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 1001 TCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGTTGATGGCATT 1050
BSNT_00004___ 1051 GATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00040___re 1051 GATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGC 1100
BSNT_00004___ 1101 GTTAGTGAAGTGA 1113
|||||||||||||
BSU00040___re 1101 GTTAGTGAAGTGA 1113
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