Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00001 and BSU00010

See Amino acid alignment / Visit BSNT_00001 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:49
# Commandline: needle
#    -asequence dna-align/BSNT_00001___dnaA.1.22522.seq
#    -bsequence dna-align/BSU00010___dnaA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00001___dnaA-BSU00010___dnaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00001___dnaA-BSU00010___dnaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00001___dnaA
# 2: BSU00010___dnaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1341
# Identity:    1330/1341 (99.2%)
# Similarity:  1330/1341 (99.2%)
# Gaps:           0/1341 ( 0.0%)
# Score: 6606.0
# 
#
#=======================================

BSNT_00001___      1 ATGGAAAATATATTAGACCTGTGGAACCAAGCCCTTGCTCAAATCGAAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn      1 ATGGAAAATATATTAGACCTGTGGAACCAAGCCCTTGCTCAAATCGAAAA     50

BSNT_00001___     51 AAAGTTGAGCAAACCGAGTTTTGAGACTTGGATGAAGTCAACCAAAGCCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn     51 AAAGTTGAGCAAACCGAGTTTTGAGACTTGGATGAAGTCAACCAAAGCCC    100

BSNT_00001___    101 ACTCACTGCAAGGCGATACATTAACGATCACGGCTCCCAATGAATTTGCC    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU00010___dn    101 ACTCACTGCAAGGCGATACATTAACAATCACGGCTCCCAATGAATTTGCC    150

BSNT_00001___    151 AGAGACTGGCTGGAGTCCAGATACTTGCATCTGATTGCAGATACTATATA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    151 AGAGACTGGCTGGAGTCCAGATACTTGCATCTGATTGCAGATACTATATA    200

BSNT_00001___    201 TGAATTAACCGGGGAAGAATTGAGCATTAAGTTTGTCATTCCTCAAAATC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    201 TGAATTAACCGGGGAAGAATTGAGCATTAAGTTTGTCATTCCTCAAAATC    250

BSNT_00001___    251 AAGATGTTGAGGACTTTATGCCGAAACCGCAAGTCAAAAAAGCGGTCAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    251 AAGATGTTGAGGACTTTATGCCGAAACCGCAAGTCAAAAAAGCGGTCAAA    300

BSNT_00001___    301 GAAGATACATCTGATTTTCCTCAAAATATGCTCAATCCAAAATATACTTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    301 GAAGATACATCTGATTTTCCTCAAAATATGCTCAATCCAAAATATACTTT    350

BSNT_00001___    351 TGATACTTTTGTCATCGGATCTGGAAACCGATTTGCACACGCTGCTTCCC    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU00010___dn    351 TGATACTTTTGTCATCGGATCTGGAAACCGATTTGCACATGCTGCTTCCC    400

BSNT_00001___    401 TCGCAGTAGCGGAAGCACCCGCGAAAGCTTACAACCCTTTATTTATCTAT    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00010___dn    401 TCGCAGTAGCGGAAGCGCCCGCGAAAGCTTACAACCCTTTATTTATCTAT    450

BSNT_00001___    451 GGGGGCGTCGGCTTAGGGAAAACGCACTTAATGCATGCGATCGGCCATTA    500
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU00010___dn    451 GGGGGCGTCGGCTTAGGGAAAACACACTTAATGCATGCGATCGGCCATTA    500

BSNT_00001___    501 TGTAATAGATCATAATCCTTCTGCCAAAGTGGTTTATCTGTCTTCTGAGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    501 TGTAATAGATCATAATCCTTCTGCCAAAGTGGTTTATCTGTCTTCTGAGA    550

BSNT_00001___    551 AATTTACAAACGAATTCATCAACTCTATCCGAGATAATAAAGCCGTCGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    551 AATTTACAAACGAATTCATCAACTCTATCCGAGATAATAAAGCCGTCGAC    600

BSNT_00001___    601 TTCCGCAATCGCTATCGAAATGTTGATGTGCTTTTGATAGATGATATTCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    601 TTCCGCAATCGCTATCGAAATGTTGATGTGCTTTTGATAGATGATATTCA    650

BSNT_00001___    651 ATTTTTAGCGGGGAAAGAACAAACCCAGGAAGAATTTTTCCATACATTTA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    651 ATTTTTAGCGGGGAAAGAACAAACCCAGGAAGAATTTTTCCATACATTTA    700

BSNT_00001___    701 ACACATTGCACGAAGAAAGCAAACAAATCGTCATTTCAAGTGACCGACCG    750
                     |||||||.||||||||||||||||||||||||||||||||||||||.|||
BSU00010___dn    701 ACACATTACACGAAGAAAGCAAACAAATCGTCATTTCAAGTGACCGGCCG    750

BSNT_00001___    751 CCAAAGGAAATTCCGACACTTGAGGACAGATTGCGCTCTCGTTTTGAATG    800
                     |||||||||||||||||||||||.||||||||||||||.|||||||||||
BSU00010___dn    751 CCAAAGGAAATTCCGACACTTGAAGACAGATTGCGCTCACGTTTTGAATG    800

BSNT_00001___    801 GGGACTTATTACAGATATCACACCGCCTGATCTAGAAACGAGAATTGCAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    801 GGGACTTATTACAGATATCACACCGCCTGATCTAGAAACGAGAATTGCAA    850

BSNT_00001___    851 TTTTAAGAAAAAAAGCCAAAGCAGAAGGCCTCGATATTCCGAACGAGGTT    900
                     |||||||||||||.|||||||||||.||||||||||||||||||||||||
BSU00010___dn    851 TTTTAAGAAAAAAGGCCAAAGCAGAGGGCCTCGATATTCCGAACGAGGTT    900

BSNT_00001___    901 ATGCTTTACATCGCGAATCAAATCGACAGCAATATTCGGGAACTCGAAGG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    901 ATGCTTTACATCGCGAATCAAATCGACAGCAATATTCGGGAACTCGAAGG    950

BSNT_00001___    951 AGCATTAATCAGAGTTGTCGCTTATTCATCTTTAATTAATAAAGATATTA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn    951 AGCATTAATCAGAGTTGTCGCTTATTCATCTTTAATTAATAAAGATATTA   1000

BSNT_00001___   1001 ATGCTGATCTGGCCGCTGAGGCGTTGAAAGATATTATTCCTTCCTCAAAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn   1001 ATGCTGATCTGGCCGCTGAGGCGTTGAAAGATATTATTCCTTCCTCAAAA   1050

BSNT_00001___   1051 CCGAAAGTCATTACGATAAAAGAAATTCAGAGGGTAGTAGGCCAGCAATT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn   1051 CCGAAAGTCATTACGATAAAAGAAATTCAGAGGGTAGTAGGCCAGCAATT   1100

BSNT_00001___   1101 TAATATTAAACTCGAGGATTTCAAAGCAAAAAAACGGACAAAGTCAGTAG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn   1101 TAATATTAAACTCGAGGATTTCAAAGCAAAAAAACGGACAAAGTCAGTAG   1150

BSNT_00001___   1151 CTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCC   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn   1151 CTTTTCCGCGTCAAATCGCCATGTACTTATCAAGGGAAATGACTGATTCC   1200

BSNT_00001___   1201 TCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00010___dn   1201 TCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCGT   1250

BSNT_00001___   1251 TATTCATGCGCATGAAAAAATTTCGAAACTGCTGGCAGATGATGAACAGC   1300
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU00010___dn   1251 TATTCATGCGCATGAAAAAATTTCAAAACTGCTGGCAGATGATGAACAGC   1300

BSNT_00001___   1301 TTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAG   1341
                     |||||||||||||||||||||||||||||||||||||||||
BSU00010___dn   1301 TTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAG   1341


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