Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06270 and BPUM_3719
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_06270___ssb.1.24716.seq
# -bsequence dna-align/BPUM_3719___ssb.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06270___ssb-BPUM_3719___ssb.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06270___ssb-BPUM_3719___ssb.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06270___ssb
# 2: BPUM_3719___ssb
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 550
# Identity: 449/550 (81.6%)
# Similarity: 449/550 (81.6%)
# Gaps: 35/550 ( 6.4%)
# Score: 1916.0
#
#
#=======================================
BSNT_06270___ 1 ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCT 50
|||||.|||||.||||||||.|||||||||||.|||||||||||.|||||
BPUM_3719___s 1 ATGCTAAACCGTGTTGTATTGGTCGGAAGACTAACAAAAGACCCTGAGCT 50
BSNT_06270___ 51 TCGTTATACGCCAAACGGTGCGGCTGTTGCTACGTTTACTCTTGCTGTGA 100
|||.||.|||||.||.|||||||||||.||.|||||||||||.|||||||
BPUM_3719___s 51 TCGCTACACGCCTAATGGTGCGGCTGTAGCCACGTTTACTCTAGCTGTGA 100
BSNT_06270___ 101 ATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAAT 150
|||||||.||||||||.||.||.|||||.|||||.||||||||||||||.
BPUM_3719___s 101 ATCGTACGTTTACGAATCAATCTGGAGAGCGTGAAGCCGATTTCATTAAC 150
BSNT_06270___ 151 TGTGTCACTTGGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAA 200
|||||.||||||||||||||||||||.||.||.||.||.|||||||||||
BPUM_3719___s 151 TGTGTTACTTGGAGAAGACAAGCCGAGAATGTGGCTAATTTCTTGAAAAA 200
BSNT_06270___ 201 AGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGAAACTATGAAA 250
||||||.|||||.||.|||||.||.|||||.||.||||||||||||||||
BPUM_3719___s 201 AGGAAGTCTTGCCGGTGTAGACGGTCGTTTGCAGACAAGAAACTATGAAA 250
BSNT_06270___ 251 ACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTT 300
|.||||||||||||||||||||||||||||||||.||||||||.||||||
BPUM_3719___s 251 ATCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTTCAAGCTGAGAGTGTT 300
BSNT_06270___ 301 CAATTTCTTGAGCCGAAAAACGGCGGCGGTTCTGGTTCAGGTGGATACAA 350
||||||||||||||.||.| ||||||||.||||||||||||||||||.
BPUM_3719___s 301 CAATTTCTTGAGCCTAAGA---GCGGCGGTGCTGGTTCAGGTGGATACAG 347
BSNT_06270___ 351 CGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGAT- 399
||..||...||...|||||||||||||.|.||||||..|||||||.|||
BPUM_3719___s 348 CGGCGGTGGCAATAGCGGAGGCCAGTATTATGGCGGTAGCCAAAACGATC 397
BSNT_06270___ 400 --AATCCATTTGG------------------------GGGAAATCAAAAC 423
||||||||||| .||.|||||||.|
BPUM_3719___s 398 AGAATCCATTTGGAAATGAACCAAGTCAAAATCCATATGGCAATCAAAGC 447
BSNT_06270___ 424 AACCAGAGA----CGCAATCAGGGGAACAGCTTTAATGATGACCCATTTG 469
||||| |.| ||.||||||||.||.|||||.||||||||||||||||
BPUM_3719___s 448 AACCA-ACAAAATCGTAATCAGGGAAATAGCTTCAATGATGACCCATTTG 496
BSNT_06270___ 470 CCAACGACGGCAAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA 519
|.||.|||||.|||||||||||||||||.|||||||||.|.|||||||||
BPUM_3719___s 497 CGAATGACGGTAAACCGATTGACATCTCCGATGATGATTTGCCATTCTAA 546
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