Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06212 and BPUM_3697
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:40
# Commandline: needle
# -asequence dna-align/BSNT_06212___dnaC.1.24716.seq
# -bsequence dna-align/BPUM_3697___dnaC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06212___dnaC-BPUM_3697___dnaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06212___dnaC-BPUM_3697___dnaC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06212___dnaC
# 2: BPUM_3697___dnaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1365
# Identity: 1097/1365 (80.4%)
# Similarity: 1097/1365 (80.4%)
# Gaps: 0/1365 ( 0.0%)
# Score: 4413.0
#
#
#=======================================
BSNT_06212___ 1 ATGACAGACCTTCTGAATGACCGGCTTCCTCCGCAAAATATAGAAGCCGA 50
|||||.||.|||||..||||||||||.||.||||||||||||||||||||
BPUM_3697___d 1 ATGACGGAACTTCTCGATGACCGGCTGCCGCCGCAAAATATAGAAGCCGA 50
BSNT_06212___ 51 ACAAGCCGTGTTAGGCGCTATTTTTTTACAGCCGTCTGCTTTAACACTGG 100
.||.|||||.|||||.|||.||||||||.|.||.|||||..|.||.||.|
BPUM_3697___d 51 GCAGGCCGTATTAGGTGCTGTTTTTTTAGAACCATCTGCGCTCACGCTCG 100
BSNT_06212___ 101 CTTCAGAAGTATTGATTCCAGATGATTTCTATAGAATGTCCCACCAAAAA 150
||||.||.|||||.||||||||.|||||||||||||||||.||.|||||.
BPUM_3697___d 101 CTTCTGAGGTATTAATTCCAGAGGATTTCTATAGAATGTCGCATCAAAAG 150
BSNT_06212___ 151 ATCTATAATGCGATGCTGGTGCTCGGTGACCGAGGTGAACCGGTTGATCT 200
||.||||||||||||||.||.||.|||||..||||.||||||||.|||||
BPUM_3697___d 151 ATTTATAATGCGATGCTTGTACTTGGTGATAGAGGGGAACCGGTCGATCT 200
BSNT_06212___ 201 GGTGACGGTAACATCAGAGCTTGCGAACACAGACCTGCTGGAAGAAGTAG 250
.||.|||||.|||||.||.||.||.||.|||||..|.||.|||||.||||
BPUM_3697___d 201 TGTTACGGTGACATCTGAACTGGCCAATACAGATTTACTAGAAGAGGTAG 250
BSNT_06212___ 251 GCGGCATTTCATATTTGACAGATATTGCAAACTCGGTGCCGACAGCGGCT 300
||||.|||||.|||||.||.||||||||.|||||.||.||.||.||.||.
BPUM_3697___d 251 GCGGGATTTCGTATTTAACCGATATTGCGAACTCTGTCCCAACTGCCGCA 300
BSNT_06212___ 301 AACATAGAATATTACGCGAAAATCGTTGAGGAAAAATCGATTCTTCGCCG 350
|||||||||||.||.||.|||||.||.||.||.|||||.|||.|..|.||
BPUM_3697___d 301 AACATAGAATACTATGCAAAAATTGTAGAAGAGAAATCCATTTTAAGACG 350
BSNT_06212___ 351 ATTAATTAGAACTGCGACAACGATTGCTCAAGACGGGTATACCCGTGAGG 400
..|.||..|.||.||||||||.|||||.||.||.||.||.||.|||||||
BPUM_3697___d 351 TCTGATCCGCACGGCGACAACCATTGCACAGGATGGATACACGCGTGAGG 400
BSNT_06212___ 401 ATGAGGTCGAGGATTTACTCAGTGAAGCGGAAAAAACGATTATGGAAGTG 450
||||.||.||||||.|..|.|||||.||.|||||.||.||||||||||||
BPUM_3697___d 401 ATGAAGTAGAGGATCTGTTGAGTGATGCTGAAAAGACCATTATGGAAGTG 450
BSNT_06212___ 451 GCACAGCGCAAAAACACGAGTGCCTTCCAAAATATTAAGGACGTCCTTGT 500
||.|||||.||||||.|..|.||.||||||||.|||||||||||.|||||
BPUM_3697___d 451 GCGCAGCGTAAAAACTCAGGAGCTTTCCAAAACATTAAGGACGTGCTTGT 500
BSNT_06212___ 501 CCAAACCTATGATAATATCGAACAGCTTCACAATCGAAAAGGTGATATCA 550
.||.||.|||||||||||.|||||||||||.||.||||||||.|||||||
BPUM_3697___d 501 TCAGACATATGATAATATTGAACAGCTTCATAACCGAAAAGGCGATATCA 550
BSNT_06212___ 551 CGGGGATTCCAACAGGGTTTACAGAGCTTGACCGGATGACTGCGGGTTTT 600
|.||||||||||||||.||..|.||||||||.||||||||.||.||.||.
BPUM_3697___d 551 CAGGGATTCCAACAGGTTTCTCCGAGCTTGATCGGATGACAGCTGGATTC 600
BSNT_06212___ 601 CAGCGCAACGACTTGATCATTGTGGCTGCCCGTCCGTCAGTAGGGAAAAC 650
|||||.||.|||||.||.|||||.||.||.|||||.||||||||||||||
BPUM_3697___d 601 CAGCGAAATGACTTAATTATTGTAGCAGCTCGTCCATCAGTAGGGAAAAC 650
BSNT_06212___ 651 AGCCTTTGCCCTGAACATCGCACAAAACGTGGCGACGAAAACCGATGAGA 700
.||.||.||..|||||||||||||.||.||.|||||.|||||.||.||.|
BPUM_3697___d 651 GGCTTTCGCATTGAACATCGCACAGAATGTTGCGACCAAAACGGACGAAA 700
BSNT_06212___ 701 GCGTCGCGATTTTCAGTCTTGAGATGGGTGCAGAGCAGCTCGTTATGCGT 750
|.|||||.||.||.|||.|.||||||||..|.||||||||.|||||||||
BPUM_3697___d 701 GTGTCGCCATCTTTAGTTTAGAGATGGGATCTGAGCAGCTAGTTATGCGT 750
BSNT_06212___ 751 ATGCTTTGTGCCGAGGGAAATATCAATGCCCAGAATCTCCGTACAGGTAA 800
|||||.|||||.|||||.|||||||||||.||.||.||..|.||.|||||
BPUM_3697___d 751 ATGCTATGTGCTGAGGGGAATATCAATGCACAAAACCTAAGAACCGGTAA 800
BSNT_06212___ 801 CCTGACCGAAGAGGATTGGGGCAAGCTGACGATGGCAATGGGAAGCCTGT 850
.|||||.||||||||.||||||||||||||.|||||||||||....||.|
BPUM_3697___d 801 TCTGACAGAAGAGGACTGGGGCAAGCTGACAATGGCAATGGGCTCGCTAT 850
BSNT_06212___ 851 CGAACAGCGGGATTTACATCGATGATACACCGGGTATTCGGGTGAGCGAA 900
|.||.||.|||||||.|||.|||||||||||.||.||..|.||.||.|||
BPUM_3697___d 851 CTAATAGTGGGATTTTCATTGATGATACACCAGGAATCAGAGTAAGTGAA 900
BSNT_06212___ 901 ATTCGTGCCAAGTGCCGCCGCTTGAAGCAGGAAAGCGGGCTGGGCATGAT 950
|||||..|.||.|||||||||||||||||.||||.|||.||.||.|||||
BPUM_3697___d 901 ATTCGCTCAAAATGCCGCCGCTTGAAGCAAGAAAACGGTCTTGGAATGAT 950
BSNT_06212___ 951 TTTGATTGATTACCTGCAATTGATTCAGGGAAGCGGTCGTTCAAAGGACA 1000
.||||||||.|||.|.||..|.|||||.||.|||||.||.||||..||.|
BPUM_3697___d 951 CTTGATTGACTACTTACAGCTTATTCAAGGGAGCGGACGATCAAGCGATA 1000
BSNT_06212___ 1001 ACCGTCAGCAGGAAGTATCTGAAATTTCCCGTGAACTGAAGTCGATTGCC 1050
||||||||||.||.||.||||||||.||.||.|.|.|.||.|||.|.||.
BPUM_3697___d 1001 ACCGTCAGCAAGAGGTTTCTGAAATCTCTCGGGCATTAAAATCGCTGGCA 1050
BSNT_06212___ 1051 AGGGAGCTGCAAGTCCCAGTTATCGCGCTTTCCCAGCTTTCCAGGGGTGT 1100
||||||||..||||.||||||||.||..|.||.||||||||..|.||.||
BPUM_3697___d 1051 AGGGAGCTTGAAGTTCCAGTTATTGCTTTGTCTCAGCTTTCACGTGGAGT 1100
BSNT_06212___ 1101 TGAGCAGCGTCAGGATAAACGGCCGATGATGTCTGATATCCGGGAATCAG 1150
.||||||||||||||.|||||.|||||||||||||||||.||.|||||||
BPUM_3697___d 1101 AGAGCAGCGTCAGGACAAACGTCCGATGATGTCTGATATTCGTGAATCAG 1150
BSNT_06212___ 1151 GAAGTATCGAGCAGGACGCGGATATTGTCGCGTTCCTTTATCGTGATGAC 1200
||||||||||||||||.||.|||||.||.||.|||||||||||||||||.
BPUM_3697___d 1151 GAAGTATCGAGCAGGATGCCGATATCGTGGCATTCCTTTATCGTGATGAT 1200
BSNT_06212___ 1201 TACTATGACAAAGAAACCGAGAATAAAAATATTATCGAAATTATTATCGC 1250
|||||.||.||||||.|.||||||||.||.|||||.|||||.||.||.||
BPUM_3697___d 1201 TACTACGATAAAGAATCAGAGAATAAGAACATTATTGAAATCATCATTGC 1250
BSNT_06212___ 1251 CAAACAGCGTAACGGCCCGGTAGGAACCGTGTCTCTTGCGTTCGTAAAAG 1300
||||||||||||||||||.||.||.||.||.||.||.||||||||.||||
BPUM_3697___d 1251 CAAACAGCGTAACGGCCCAGTGGGTACAGTATCACTGGCGTTCGTCAAAG 1300
BSNT_06212___ 1301 AATACAACAAATTCGTCAACCTGGAACGGCGTTTTGATGACGCAGGTGTT 1350
||||.|||||||||||||||||||||.|..|.|||||.||.||.||||||
BPUM_3697___d 1301 AATATAACAAATTCGTCAACCTGGAAAGAAGGTTTGACGATGCGGGTGTT 1350
BSNT_06212___ 1351 CCGCCCGGCGCATAA 1365
||||||||.||.|||
BPUM_3697___d 1351 CCGCCCGGTGCTTAA 1365
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