Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06172 and BPUM_3676
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_06172___yydA.1.24716.seq
# -bsequence dna-align/BPUM_3676___yydA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06172___yydA-BPUM_3676___yydA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06172___yydA-BPUM_3676___yydA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06172___yydA
# 2: BPUM_3676___yydA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity: 395/483 (81.8%)
# Similarity: 395/483 (81.8%)
# Gaps: 6/483 ( 1.2%)
# Score: 1606.0
#
#
#=======================================
BSNT_06172___ 1 GTGAATATCAAT--ATTGTGACAATCGGAAAACTAAAAGAAAAATACCTC 48
|||||||| || |||.|.|||.|.||||||.|||||||.|||||..|.
BPUM_3676___y 1 GTGAATAT--ATCAATTATCACAGTAGGAAAATTAAAAGAGAAATATTTA 48
BSNT_06172___ 49 AAACAAGGCATTGAAGAATACACCAAACGACTTTC-GGCCTACGCAAAAA 97
||.||||||||.|..||||||||.|||||| ||.| |||.||.||.||||
BPUM_3676___y 49 AAGCAAGGCATAGCCGAATACACAAAACGA-TTACAGGCTTATGCGAAAA 97
BSNT_06172___ 98 TCGACATCATCGAACTCCCGGACGAAAAAGCGCCGGAAAACCTAAGCGAC 147
||||||||||.||||||.|.|||||||||||.||.|||.||||.||.||.
BPUM_3676___y 98 TCGACATCATTGAACTCGCAGACGAAAAAGCACCAGAACACCTCAGTGAG 147
BSNT_06172___ 148 CAGGACATGAAAATCATAAAAGACAAAGAAGGCGACCGCATCCTATCAAA 197
||.||||||||||||||.|||||||||||||||||.|||||||||...||
BPUM_3676___y 148 CAAGACATGAAAATCATCAAAGACAAAGAAGGCGAACGCATCCTAAGCAA 197
BSNT_06172___ 198 AATCAGCCCCGACGCCCACGTCATCGCCCTCGCCATCGAAGGAAAAATGA 247
|||||.|||.||||||||||||||||||||||||||||||||||||||||
BPUM_3676___y 198 AATCAACCCAGACGCCCACGTCATCGCCCTCGCCATCGAAGGAAAAATGA 247
BSNT_06172___ 248 AAACATCCGAAGAACTAGCCGATACAATAGATAAGCTGGCGACATATGGA 297
||||.|||||||||.|||||||||||||||||||||||||.|||||.|||
BPUM_3676___y 248 AAACTTCCGAAGAATTAGCCGATACAATAGATAAGCTGGCAACATACGGA 297
BSNT_06172___ 298 AAAAGCAAAGTCACCTTCGTCATCGGCGGATCACTCGGATTGAGCGACGC 347
||||||||.||....||.||.||.|||||.||.||.|||||.|||||.||
BPUM_3676___y 298 AAAAGCAAGGTGTGTTTTGTGATAGGCGGGTCGCTTGGATTAAGCGATGC 347
BSNT_06172___ 348 GGTAATGAAGCGAGCGGATGAGAAGCTGTCATTCTCGAAAATGACGTTCC 397
.||.|||.||||.|||.||||||||.||||.||.||||..||||||||||
BPUM_3676___y 348 TGTCATGCAGCGTGCGAATGAGAAGTTGTCGTTTTCGAGGATGACGTTCC 397
BSNT_06172___ 398 CTCATCAGTTGATGCGGCTCATACTAGTGGAGCAGATTTATCGGGCTTTT 447
|.||||||||||||.||.|..|..|.|||||||||.|||||||.||.|||
BPUM_3676___y 398 CGCATCAGTTGATGAGGTTGGTGTTGGTGGAGCAGGTTTATCGAGCGTTT 447
BSNT_06172___ 448 CGGATTAATCGTGGGGAACCGTATCACAAATAG 480
||||||...||.|||||.||.|||||.||.||.
BPUM_3676___y 448 CGGATTGTGCGGGGGGAGCCTTATCATAAGTAA 480
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