Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06141 and BPUM_3630
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_06141___yxaA.1.24716.seq
# -bsequence dna-align/BPUM_3630___glxK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06141___yxaA-BPUM_3630___glxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06141___yxaA-BPUM_3630___glxK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06141___yxaA
# 2: BPUM_3630___glxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1194
# Identity: 797/1194 (66.8%)
# Similarity: 797/1194 (66.8%)
# Gaps: 99/1194 ( 8.3%)
# Score: 2270.5
#
#
#=======================================
BSNT_06141___ 1 ATGAAAATCATCATTGCACCTGATTCTTTTAAGGAAAGCTTATCAGC-TC 49
||||||||..|.||||||||.|||||.|||||.|||||.|||||.|| |.
BPUM_3630___g 1 ATGAAAATTGTGATTGCACCAGATTCATTTAAAGAAAGTTTATCTGCATA 50
BSNT_06141___ 50 TGGAGGCAGCCGAAGCGATAGAAAGAGG-TTTCAAATCGGTCTTTCCGGG 98
| |||.||||....||.||.||..|||| |||| ||.||.|.||.||.|.
BPUM_3630___g 51 T-GAGACAGCATGTGCCATTGAGCGAGGATTTC-AAGCGATTTTGCCAGA 98
BSNT_06141___ 99 TGCTGATTACAGAAAATTGCCGGTGGCGGATGGCGGCGAGGGAACCGTTC 148
.|||||.||.|..|||.|.||..||||.|||||.||.||||||||.||||
BPUM_3630___g 99 CGCTGAATATATCAAACTTCCCATGGCAGATGGAGGAGAGGGAACTGTTC 148
BSNT_06141___ 149 AATCTCTGGTCGATGCGACCAACGGAAGG----ATCATAGAGCAAGTTGT 194
||||.||.||.|||||| ||||..|| ||.||..|.||.||.||
BPUM_3630___g 149 AATCGCTAGTTGATGCG----ACGGGTGGGCACATAATCAATCATGTGGT 194
BSNT_06141___ 195 CACAGGGCCGCTGGGGGAACCGGT-GAGAGCTTTCTTTGGCATGATGGGA 243
||||||.|||||.||.||.||.|| || .||.||.|||||||||.|.|||
BPUM_3630___g 195 CACAGGCCCGCTTGGTGACCCCGTCGA-TGCCTTTTTTGGCATGTTAGGA 243
BSNT_06141___ 244 GATG-GGAGAACAGCTGTGATTGAAATGGCTGCTGCTTCAGGGCTGCATC 292
||.| .||| ||.|||||.||.||.|||||.||.||.||.|||.|.||.|
BPUM_3630___g 244 GACGATGAG-ACGGCTGTTATAGAGATGGCCGCAGCCTCTGGGTTACACC 292
BSNT_06141___ 293 TGGTGCCTGTAGATAAGCGAAATCCGCTCATCACTACAACAAGGGGAACG 342
|.||.||...|||.||.||.|||||..|..||||.|||.|.|.||||||.
BPUM_3630___g 293 TTGTTCCACAAGAAAAACGCAATCCATTACTCACGACATCGAAGGGAACT 342
BSNT_06141___ 343 GGAGAATTAATCGGAGCAGCTCTTGATGCGGGAGCGGAGCGAT-TGATCA 391
||.||||||||....||.||.||.|||...|||||..||| || |.||||
BPUM_3630___g 343 GGGGAATTAATGCTTGCGGCGCTAGATCAAGGAGCAAAGC-ATGTCATCA 391
BSNT_06141___ 392 TCGGAATCGGCGGAAGCGCCACGAACGACGGGGGAGCCGGGATGATTCAG 441
|.||..|.||||||||.||.||.||.||.||.||.|..||||||||.||.
BPUM_3630___g 392 TTGGGCTTGGCGGAAGTGCAACAAATGATGGAGGCGTTGGGATGATGCAA 441
BSNT_06141___ 442 GCATTGGGCGGAAGGC--TTCTTGATAACTCAGG-CAGCGAGATTGGC-C 487
|.|||.||.|.| || ||||.|||.|..|||| ||| ||| |||.| |
BPUM_3630___g 442 GGATTAGGTGCA--GCTTTTCTCGATCAAGCAGGACAG-GAG-TTGTCGC 487
BSNT_06141___ 488 CAGGGGGCGGCGCGTTATC-TCAGCTTGCATCAATAGATGTTGGCGGGCT 536
||||.||.||.||..| || |||..|.||.||.||.|||.|....||.||
BPUM_3630___g 488 CAGGTGGTGGAGCCCT-TCATCAATTAGCTTCTATTGATCTAACTGGACT 536
BSNT_06141___ 537 TGATTCCAGATTGCGGAATGTCAAACTGGAAGTTGCCTGTGACGTGGACA 586
|||..|.|||.|||.|...||....|||||.|..||||||||||||||.|
BPUM_3630___g 537 TGACCCTAGACTGCAGTCCGTTCGGCTGGAGGCAGCCTGTGACGTGGATA 586
BSNT_06141___ 587 ATCCGTTAACAGGACCAAAG---GGTGCTACGGCTGTTTTCGGACCGCAA 633
||||.|||||||| .||| ||.||..|.|||||.||.||.||.|||
BPUM_3630___g 587 ATCCTTTAACAGG---TAAGAGAGGAGCGTCTGCTGTATTTGGTCCTCAA 633
BSNT_06141___ 634 AAAGGCGC-GACGGCCGACATGCTGGATGTACTAGAACA-GAACGTAAAC 681
|||||.|| || .|..||.|||.|..|.||.|||| ||| |||..|||..
BPUM_3630___g 634 AAAGGTGCTGA-TGAAGAAATGGTTCAAGTGCTAG-ACATGAATTTAACT 681
BSNT_06141___ 682 CATTTCGCTGATATGACAGAAAAAGAGCTCGGATCAACCTTCCGAGATA- 730
|||||.||..|.||..|||||||..|| |...||..|.|||..|| |||
BPUM_3630___g 682 CATTTTGCCCAAATAGCAGAAAAGCAG-TTTAATGTATCTTTTGA-ATAT 729
BSNT_06141___ 731 -CAGAGGGCGCCGGTGCAGCGGGCGGTCTTGGATG-GAGCCTGCT-GACT 777
||||.||.||.||.||.||.||.||.||||| || |||..|..| |.||
BPUM_3630___g 730 GCAGAAGGGGCAGGAGCGGCAGGAGGACTTGG-TGCGAGTTTATTAGGCT 778
BSNT_06141___ 778 TATTTTCAGGCTGACCTGAAAAGAGGCATTGATATTGTCCTTGAAGCGGT 827
| |||.||.|||||..||.|..||||.|||||||||||.||..|.||.||
BPUM_3630___g 779 T-TTTACACGCTGATTTGCAGCGAGGAATTGATATTGTGCTCAAGGCAGT 827
BSNT_06141___ 828 TGATTTTGAAAATATCGTTCAGGATGCAGATCTTGTGATTACCGGCGAGG 877
|.|.|||||..||.||.|..|||..|||||.||.||||||||.| ||
BPUM_3630___g 828 TCAGTTTGATGATGTCATCAAGGGGGCAGACCTAGTGATTACTG----GG 873
BSNT_06141___ 878 GAAGG----ATCGA-CAGCCAAACGGTTCATGGAAAAACGCCGATCGGCG 922
||||| ||.|| ||| |||||..||.||||||||||.||.||.||.|
BPUM_3630___g 874 GAAGGCCGAATTGACCAG-CAAACCATTTATGGAAAAACCCCAATTGGTG 922
BSNT_06141___ 923 TAGCCAAGGCGGCTAAATCA-TATGATGTGCCCGTCATCGGTATTGCGGG 971
|||||||.||.|| |||.|| |||.|..||||.||.|||||.||.|||||
BPUM_3630___g 923 TAGCCAAAGCAGC-AAAGCAGTATCACCTGCCTGTGATCGGCATCGCGGG 971
BSNT_06141___ 972 ATCAGTATCACGAGACAGTGATGCCGTCTATCAACACGGAATCGATGCGC 1021
.||..|.|||..|||.||||..|.|||..||.|.||.||.||.|||||.|
BPUM_3630___g 972 CTCTCTCTCAAAAGATAGTGCAGTCGTACATGAGCATGGCATTGATGCCC 1021
BSNT_06141___ 1022 TTTTCAGCATCGTTCCCGGAGCCGTG-----CCGCTAGAAGACGCGTTTG 1066
||||.||.||||||||.| ||| .|.||....||.||| .||
BPUM_3630___g 1022 TTTTTAGTATCGTTCCAG-----GTGTAACTTCTCTTTTTGAGGCG-ATG 1065
BSNT_06141___ 1067 A-ACATGCCGCGGAATAT--ATG--GAAAGAACGGCGCGGGACATTGCAG 1111
| |.||| ||..||| ||| ||.|||||.||.||..|.|||||.|
BPUM_3630___g 1066 AGAGATG----GGGCTATTCATGTAGAGAGAACCGCTCGAAATATTGCGG 1111
BSNT_06141___ 1112 CGACTATCA--AATTGGCGAAAACGATGTTTCTGATATAG---- 1149
|.||||| | |||||| || ||.|||.
BPUM_3630___g 1112 CTACTAT-ATCAATTGG----AA----------GAAATAAGTAA 1140
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