Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06141 and BPUM_3630

See Amino acid alignment / Visit BSNT_06141 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:37
# Commandline: needle
#    -asequence dna-align/BSNT_06141___yxaA.1.24716.seq
#    -bsequence dna-align/BPUM_3630___glxK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06141___yxaA-BPUM_3630___glxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06141___yxaA-BPUM_3630___glxK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06141___yxaA
# 2: BPUM_3630___glxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1194
# Identity:     797/1194 (66.8%)
# Similarity:   797/1194 (66.8%)
# Gaps:          99/1194 ( 8.3%)
# Score: 2270.5
# 
#
#=======================================

BSNT_06141___      1 ATGAAAATCATCATTGCACCTGATTCTTTTAAGGAAAGCTTATCAGC-TC     49
                     ||||||||..|.||||||||.|||||.|||||.|||||.|||||.|| |.
BPUM_3630___g      1 ATGAAAATTGTGATTGCACCAGATTCATTTAAAGAAAGTTTATCTGCATA     50

BSNT_06141___     50 TGGAGGCAGCCGAAGCGATAGAAAGAGG-TTTCAAATCGGTCTTTCCGGG     98
                     | |||.||||....||.||.||..|||| |||| ||.||.|.||.||.|.
BPUM_3630___g     51 T-GAGACAGCATGTGCCATTGAGCGAGGATTTC-AAGCGATTTTGCCAGA     98

BSNT_06141___     99 TGCTGATTACAGAAAATTGCCGGTGGCGGATGGCGGCGAGGGAACCGTTC    148
                     .|||||.||.|..|||.|.||..||||.|||||.||.||||||||.||||
BPUM_3630___g     99 CGCTGAATATATCAAACTTCCCATGGCAGATGGAGGAGAGGGAACTGTTC    148

BSNT_06141___    149 AATCTCTGGTCGATGCGACCAACGGAAGG----ATCATAGAGCAAGTTGT    194
                     ||||.||.||.||||||    ||||..||    ||.||..|.||.||.||
BPUM_3630___g    149 AATCGCTAGTTGATGCG----ACGGGTGGGCACATAATCAATCATGTGGT    194

BSNT_06141___    195 CACAGGGCCGCTGGGGGAACCGGT-GAGAGCTTTCTTTGGCATGATGGGA    243
                     ||||||.|||||.||.||.||.|| || .||.||.|||||||||.|.|||
BPUM_3630___g    195 CACAGGCCCGCTTGGTGACCCCGTCGA-TGCCTTTTTTGGCATGTTAGGA    243

BSNT_06141___    244 GATG-GGAGAACAGCTGTGATTGAAATGGCTGCTGCTTCAGGGCTGCATC    292
                     ||.| .||| ||.|||||.||.||.|||||.||.||.||.|||.|.||.|
BPUM_3630___g    244 GACGATGAG-ACGGCTGTTATAGAGATGGCCGCAGCCTCTGGGTTACACC    292

BSNT_06141___    293 TGGTGCCTGTAGATAAGCGAAATCCGCTCATCACTACAACAAGGGGAACG    342
                     |.||.||...|||.||.||.|||||..|..||||.|||.|.|.||||||.
BPUM_3630___g    293 TTGTTCCACAAGAAAAACGCAATCCATTACTCACGACATCGAAGGGAACT    342

BSNT_06141___    343 GGAGAATTAATCGGAGCAGCTCTTGATGCGGGAGCGGAGCGAT-TGATCA    391
                     ||.||||||||....||.||.||.|||...|||||..||| || |.||||
BPUM_3630___g    343 GGGGAATTAATGCTTGCGGCGCTAGATCAAGGAGCAAAGC-ATGTCATCA    391

BSNT_06141___    392 TCGGAATCGGCGGAAGCGCCACGAACGACGGGGGAGCCGGGATGATTCAG    441
                     |.||..|.||||||||.||.||.||.||.||.||.|..||||||||.||.
BPUM_3630___g    392 TTGGGCTTGGCGGAAGTGCAACAAATGATGGAGGCGTTGGGATGATGCAA    441

BSNT_06141___    442 GCATTGGGCGGAAGGC--TTCTTGATAACTCAGG-CAGCGAGATTGGC-C    487
                     |.|||.||.|.|  ||  ||||.|||.|..|||| ||| ||| |||.| |
BPUM_3630___g    442 GGATTAGGTGCA--GCTTTTCTCGATCAAGCAGGACAG-GAG-TTGTCGC    487

BSNT_06141___    488 CAGGGGGCGGCGCGTTATC-TCAGCTTGCATCAATAGATGTTGGCGGGCT    536
                     ||||.||.||.||..| || |||..|.||.||.||.|||.|....||.||
BPUM_3630___g    488 CAGGTGGTGGAGCCCT-TCATCAATTAGCTTCTATTGATCTAACTGGACT    536

BSNT_06141___    537 TGATTCCAGATTGCGGAATGTCAAACTGGAAGTTGCCTGTGACGTGGACA    586
                     |||..|.|||.|||.|...||....|||||.|..||||||||||||||.|
BPUM_3630___g    537 TGACCCTAGACTGCAGTCCGTTCGGCTGGAGGCAGCCTGTGACGTGGATA    586

BSNT_06141___    587 ATCCGTTAACAGGACCAAAG---GGTGCTACGGCTGTTTTCGGACCGCAA    633
                     ||||.||||||||   .|||   ||.||..|.|||||.||.||.||.|||
BPUM_3630___g    587 ATCCTTTAACAGG---TAAGAGAGGAGCGTCTGCTGTATTTGGTCCTCAA    633

BSNT_06141___    634 AAAGGCGC-GACGGCCGACATGCTGGATGTACTAGAACA-GAACGTAAAC    681
                     |||||.|| || .|..||.|||.|..|.||.|||| ||| |||..|||..
BPUM_3630___g    634 AAAGGTGCTGA-TGAAGAAATGGTTCAAGTGCTAG-ACATGAATTTAACT    681

BSNT_06141___    682 CATTTCGCTGATATGACAGAAAAAGAGCTCGGATCAACCTTCCGAGATA-    730
                     |||||.||..|.||..|||||||..|| |...||..|.|||..|| ||| 
BPUM_3630___g    682 CATTTTGCCCAAATAGCAGAAAAGCAG-TTTAATGTATCTTTTGA-ATAT    729

BSNT_06141___    731 -CAGAGGGCGCCGGTGCAGCGGGCGGTCTTGGATG-GAGCCTGCT-GACT    777
                      ||||.||.||.||.||.||.||.||.||||| || |||..|..| |.||
BPUM_3630___g    730 GCAGAAGGGGCAGGAGCGGCAGGAGGACTTGG-TGCGAGTTTATTAGGCT    778

BSNT_06141___    778 TATTTTCAGGCTGACCTGAAAAGAGGCATTGATATTGTCCTTGAAGCGGT    827
                     | |||.||.|||||..||.|..||||.|||||||||||.||..|.||.||
BPUM_3630___g    779 T-TTTACACGCTGATTTGCAGCGAGGAATTGATATTGTGCTCAAGGCAGT    827

BSNT_06141___    828 TGATTTTGAAAATATCGTTCAGGATGCAGATCTTGTGATTACCGGCGAGG    877
                     |.|.|||||..||.||.|..|||..|||||.||.||||||||.|    ||
BPUM_3630___g    828 TCAGTTTGATGATGTCATCAAGGGGGCAGACCTAGTGATTACTG----GG    873

BSNT_06141___    878 GAAGG----ATCGA-CAGCCAAACGGTTCATGGAAAAACGCCGATCGGCG    922
                     |||||    ||.|| ||| |||||..||.||||||||||.||.||.||.|
BPUM_3630___g    874 GAAGGCCGAATTGACCAG-CAAACCATTTATGGAAAAACCCCAATTGGTG    922

BSNT_06141___    923 TAGCCAAGGCGGCTAAATCA-TATGATGTGCCCGTCATCGGTATTGCGGG    971
                     |||||||.||.|| |||.|| |||.|..||||.||.|||||.||.|||||
BPUM_3630___g    923 TAGCCAAAGCAGC-AAAGCAGTATCACCTGCCTGTGATCGGCATCGCGGG    971

BSNT_06141___    972 ATCAGTATCACGAGACAGTGATGCCGTCTATCAACACGGAATCGATGCGC   1021
                     .||..|.|||..|||.||||..|.|||..||.|.||.||.||.|||||.|
BPUM_3630___g    972 CTCTCTCTCAAAAGATAGTGCAGTCGTACATGAGCATGGCATTGATGCCC   1021

BSNT_06141___   1022 TTTTCAGCATCGTTCCCGGAGCCGTG-----CCGCTAGAAGACGCGTTTG   1066
                     ||||.||.||||||||.|     |||     .|.||....||.||| .||
BPUM_3630___g   1022 TTTTTAGTATCGTTCCAG-----GTGTAACTTCTCTTTTTGAGGCG-ATG   1065

BSNT_06141___   1067 A-ACATGCCGCGGAATAT--ATG--GAAAGAACGGCGCGGGACATTGCAG   1111
                     | |.|||    ||..|||  |||  ||.|||||.||.||..|.|||||.|
BPUM_3630___g   1066 AGAGATG----GGGCTATTCATGTAGAGAGAACCGCTCGAAATATTGCGG   1111

BSNT_06141___   1112 CGACTATCA--AATTGGCGAAAACGATGTTTCTGATATAG----   1149
                     |.||||| |  ||||||    ||          ||.|||.    
BPUM_3630___g   1112 CTACTAT-ATCAATTGG----AA----------GAAATAAGTAA   1140


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