Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00979 and BPUM_3583
See
Amino acid alignment /
Visit
BSNT_00979 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence dna-align/BSNT_00979.1.24716.seq
# -bsequence dna-align/BPUM_3583___ydgJ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00979-BPUM_3583___ydgJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00979-BPUM_3583___ydgJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00979
# 2: BPUM_3583___ydgJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 455
# Identity: 313/455 (68.8%)
# Similarity: 313/455 (68.8%)
# Gaps: 31/455 ( 6.8%)
# Score: 1042.0
#
#
#=======================================
BSNT_00979 1 ------TTGGCGTCATTTTGTTCAGAGGAAGCCGAGATTTTATATCAGCT 44
|||.|..|||||||.||.||.|||||.|||.|.|||||.|...|
BPUM_3583___y 1 ATGGCATTGACTGCATTTTGCTCTGAAGAAGCAGAGGTATTATACCGTTT 50
BSNT_00979 45 GCAAGGCGTGAACAAGGTGATTGGCGTGAAGTTCGAGGCATGCACGGGCA 94
|||..||||||||....||||.||||||||||||||.|||||||||||||
BPUM_3583___y 51 GCAGTGCGTGAACCGTATGATGGGCGTGAAGTTCGAAGCATGCACGGGCA 100
BSNT_00979 95 TCAGCCAATCTCGTTTGGAATTGCTGACATTGCTTTATCATGCAGATGAG 144
||||||||||..|.||.||.|||||..||.||.|.|.|||.|||||.||.
BPUM_3583___y 101 TCAGCCAATCAAGATTAGAGTTGCTCTCACTGTTATTTCAAGCAGACGAA 150
BSNT_00979 145 AT----CAGTCAAAGCGACCTTCAAAAGAAAGTAAATATCGATAGCGCAG 190
|| |||||| ||..|.||.||.|||||||||||.|||||.||.|
BPUM_3583___y 151 ATCAGCCAGTCA----GATTTGCAGAAAAAAGTAAATATTGATAGTGCGG 196
BSNT_00979 191 CCGTTACCAGACACCTGAAACAGCTGGAAGCTAAAGGCATGGTATCAAGG 240
|.||.||..|.|||.|.||||||.|.|||.|.|||||.|||||..|
BPUM_3583___y 197 CTGTGACGCGTCACTTAAAACAGTTAGAAACAAAAGGAATGGTCAC---- 242
BSNT_00979 241 CGGCGC------AAGCCTGAGGACAACCGCATCACCCTTGTTCGGTTAAC 284
|||| |||||.||.||.||.||..||||.||||||||..|.||
BPUM_3583___y 243 --GCGCAGAAGAAAGCCAGAAGATAATCGAGTCACACTTGTTCGTCTGAC 290
BSNT_00979 285 AGACCAAGGAAGAGAGCGAATTGAGTCTTCTAAGAAGGAAAAGGAGCGTT 334
|||..||||||||....||||.||..|||||||.||.|||||.||.||.|
BPUM_3583___y 291 AGATGAAGGAAGAACAAGAATCGAAGCTTCTAAAAAAGAAAAAGAACGAT 340
BSNT_00979 335 TCATGAAGGAAATGCTCGCAAATGTAAGCGCAGAAGAACGCCGCCTGCTC 384
|.||....||||||||.|..||.|||||.|..||||||||....||.|||
BPUM_3583___y 341 TTATCTCAGAAATGCTTGAGAACGTAAGTGACGAAGAACGAAAGCTTCTC 390
BSNT_00979 385 ATTGATGTGCT-GGCGCGCATGCGAAACAATATAGATAATATTGA---AG 430
|.||||||||| .|| ||.||.|.|.|.||.||.||.||.|||.| |.
BPUM_3583___y 391 ACTGATGTGCTCAGC-CGAATACAACAAAACATCGAAAAGATTCAAACAA 439
BSNT_00979 431 CTTAA 435
|||||
BPUM_3583___y 440 CTTAA 444
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.