Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00978 and BPUM_3582
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:38
# Commandline: needle
# -asequence dna-align/BSNT_00978___ydgI.1.24716.seq
# -bsequence dna-align/BPUM_3582___ydgI.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00978___ydgI-BPUM_3582___ydgI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00978___ydgI-BPUM_3582___ydgI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00978___ydgI
# 2: BPUM_3582___ydgI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 645
# Identity: 508/645 (78.8%)
# Similarity: 508/645 (78.8%)
# Gaps: 21/645 ( 3.3%)
# Score: 2023.5
#
#
#=======================================
BSNT_00978___ 1 -----------ATGATCAAAACAAACGATTTTATGGAAATTATGAAAGGC 39
|| |.||||||||||||||||||||||||||||||||.
BPUM_3582___y 1 ATGGCTACAACAT--TAAAAACAAACGATTTTATGGAAATTATGAAAGGA 48
BSNT_00978___ 40 CGCCGTTCTATCCGCAACTATGATCCGGCAGTAAAAATCAGCAAAGAAGA 89
|||||||||||.||.||||||||.||.||.||.|||||||||||||||||
BPUM_3582___y 49 CGCCGTTCTATTCGTAACTATGACCCAGCTGTGAAAATCAGCAAAGAAGA 98
BSNT_00978___ 90 AATGACAGAGATCTTAGAGGAAGCAACAACTGCCCCATCTTCTGTTAACG 139
||||.|||||||..||||.||||||||||||||.|||||.||.||.||.|
BPUM_3582___y 99 AATGGCAGAGATTCTAGAAGAAGCAACAACTGCACCATCATCAGTGAATG 148
BSNT_00978___ 140 CGCAGCCATGGCGTTTTCTTGTCATTGACAGCCCGGAAGGAAAAGAAAAG 189
|.|||||.|||||.||..|.||||||||||||||.|||||||||||||||
BPUM_3582___y 149 CACAGCCTTGGCGCTTCATGGTCATTGACAGCCCAGAAGGAAAAGAAAAG 198
BSNT_00978___ 190 CTCGCACCGCTTGCAAGCTTTAACCAAACACAGGTCACAACATCATCTGC 239
||.|||||.|||||||..||.||||||||.||.||..||||||||.|.||
BPUM_3582___y 199 CTTGCACCACTTGCAAAATTCAACCAAACTCAAGTGTCAACATCAGCAGC 248
BSNT_00978___ 240 TGTCATCGCTGTATTTGCAGACATGAA---CAATGCAGACTACTTAGAAG 286
||||||.||.|||||||||||.||||| |||| ||.||||||||.|
BPUM_3582___y 249 TGTCATTGCCGTATTTGCAGATATGAAAAGCAAT---GAATACTTAGATG 295
BSNT_00978___ 287 AAATCTATTCAAAAGCCGTGGAACTTGGTTACATGCCGCAGGAGGTCAAA 336
||||.|||||||||||.||.||.|.|||.||||||||.||.||.||.|||
BPUM_3582___y 296 AAATTTATTCAAAAGCAGTAGAGCATGGCTACATGCCTCAAGAAGTGAAA 345
BSNT_00978___ 337 GACAGACAAATCGCCGCGCTGACCGCACATTTTGAAAAGCTTCCGGCACA 386
||.||||||||.||.||.||.||.|||||.|||||....|||||.|..||
BPUM_3582___y 346 GAAAGACAAATTGCTGCACTAACTGCACACTTTGAGGTACTTCCAGAGCA 395
BSNT_00978___ 387 GGTCAACCGTGAAACGATCCTGATTGATGGAGGTCTTGTTTCCATGCAGC 436
.||||||||.|||||.|||.|.|||||.||.||..||||.||.|||||||
BPUM_3582___y 396 AGTCAACCGCGAAACAATCTTAATTGACGGTGGAATTGTGTCTATGCAGC 445
BSNT_00978___ 437 TGATGCTGACTGCACGCGCGCATGGCTACGATACAAACCCGATCGGCGGA 486
|.|||||..|.|||||.||.||.|||||.||||||||.||.||.||.||.
BPUM_3582___y 446 TTATGCTTGCAGCACGTGCACACGGCTATGATACAAATCCAATTGGTGGT 495
BSNT_00978___ 487 TACGATAAAGAAAACATCGCGGAAACCTTCGGATTAGATAAAGAACGTTA 536
|..|||||||||..||||||.|||||.||.||.|..||||||||||||||
BPUM_3582___y 496 TTTGATAAAGAAGTCATCGCTGAAACATTTGGCTGGGATAAAGAACGTTA 545
BSNT_00978___ 537 TGTACCGGTTATGCTACTTTCTATCGGAAAAGCAGCAGACGAAGGCTATG 586
||||||.||.|||||..|.||.||.||.|||||.||.||||||||.||||
BPUM_3582___y 546 TGTACCAGTAATGCTGTTATCAATTGGGAAAGCTGCTGACGAAGGTTATG 595
BSNT_00978___ 587 CTTCCTACCGTCTGCCGATTGATAC-AATTGCAGAATGGAAATAA 630
||||.|||||..|.|||||||| || .|||.||||.|||||||||
BPUM_3582___y 596 CTTCTTACCGCTTACCGATTGA-ACGCATTACAGAGTGGAAATAA 639
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