Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06027 and BPUM_3566
See
Amino acid alignment /
Visit
BSNT_06027 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence dna-align/BSNT_06027___bglP.1.24716.seq
# -bsequence dna-align/BPUM_3566.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06027___bglP-BPUM_3566.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06027___bglP-BPUM_3566.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06027___bglP
# 2: BPUM_3566
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2073
# Identity: 1225/2073 (59.1%)
# Similarity: 1225/2073 (59.1%)
# Gaps: 408/2073 (19.7%)
# Score: 3204.5
#
#
#=======================================
BSNT_06027___ 1 ATGGATTATGATAAATTATCGAAGGACATATTACAACTCGTAGGCGGTGA 50
|||.|..|..|..||..|.|.||.||..|..||.|.||.||.||||||||
BPUM_3566 1 ATGAACCACAAACAAACAGCAAAAGAAGTTCTAGAGCTTGTCGGCGGTGA 50
BSNT_06027___ 51 AGACAACGTTCAGCGCGTGATTCACTGCATGACGAGGCTGCGTTTTAATC 100
|.|.||.|||.|||..||.|..||.||.|||||.||.||.||.||.|| |
BPUM_3566 51 AAAGAATGTTAAGCAGGTCACGCATTGTATGACAAGACTTCGCTTCAA-C 99
BSNT_06027___ 101 TT----CATGACAACGCGAAGGCGGAT----------CGCAGTCAGCTGG 136
|| .||||.|.| ||.|||||| .|||.|||.|
BPUM_3566 100 TTATACGATGAAAGC---AAAGCGGATAAAGAGAAGCTGCAATCAAC--- 143
BSNT_06027___ 137 AGCAGCTGCC--GGGGGTGATGGGCACCAATATCAGCGGCGAGCAGTTTC 184
||..|.||.| |||.|||| |.||| |||||.|..||.|.||
BPUM_3566 144 AGATGGTGTCATGGGTGTGA-----ATCAA----AGCGGAGGTCAATATC 184
BSNT_06027___ 185 AAATCATTATCGGAAACGATGTGCCGAAGGTGTATCAGGCGATTG--TGC 232
|..||||||||||.||.|||||..|.||.||.|||||.|||| || |||
BPUM_3566 185 ATGTCATTATCGGCAATGATGTTTCAAATGTCTATCAAGCGA-TGATTGC 233
BSNT_06027___ 233 GG---CAGAGCAATC-TCAGTGATGAAAAG--AGCGCTGGTTCATCCTCT 276
.| |||..|.||| .|| ||||.|||| || || ||| .
BPUM_3566 234 TGACTCAGGCCTATCAACA--GATGTAAAGTCAG-GC-GGT--------A 271
BSNT_06027___ 277 CAGAAAAAG-----------AATGTG----CTGAGTGCGGTCTTT--GAT 309
|||||.||| |||||| ||.|| |||| |||
BPUM_3566 272 CAGAAGAAGCAACAAAACAAAATGTGATATCTAAG------CTTTTCGAT 315
BSNT_06027___ 310 GTGATTTCTGGGGTGTTTACTCCGATTCTGCCTGCGATTGCGGGGGCGGG 359
.|.||.|||||.||.||.||.||||||||.||.||.||||||||.||.||
BPUM_3566 316 TTTATCTCTGGTGTCTTCACACCGATTCTTCCAGCCATTGCGGGAGCCGG 365
BSNT_06027___ 360 GATGATCAAAGGG--CTTGTTGCGCTGGCA--GTTACGTTTGGCTGGATG 405
||||||||||||| |||| ||.|| || .|||||||....|||||.
BPUM_3566 366 GATGATCAAAGGGATCTTG--GCACT--CATGCTTACGTTCCAGTGGATT 411
BSNT_06027___ 406 GCGGAGAAGAGC--CAGGTTCATGTCATTTTGACGGCTGTCGGTGACGGT 453
.|.||.||.||| ||..| |||.||||||.||.|||.||||.|||||.
BPUM_3566 412 TCAGATAAAAGCAGCACAT--ATGCCATTTTAACAGCTATCGGAGACGGA 459
BSNT_06027___ 454 GCGTTCTACTTCCTGCCGCTCCTGCTAGCGATGAGTGCGGCGAGAAAATT 503
||.||.||||||.|.|||.|.|||||.||..|.||.|..||.|.||||.|
BPUM_3566 460 GCCTTTTACTTCTTACCGATTCTGCTTGCTGTAAGCGTAGCCAAAAAAAT 509
BSNT_06027___ 504 CGGAAGCAATCCGTACGTAGCGGCAGCCATTGCGGCGGCGATCCTGCATC 553
.||.|..||||.|||..|.||.||.||||||||.||.||....|||||.|
BPUM_3566 510 TGGCACAAATCAGTATATCGCTGCTGCCATTGCAGCAGCCGCACTGCACC 559
BSNT_06027___ 554 CGGATTTGACAGCCCTGCTCGGTGCGGGGAA-ACCG-ATTTCCTTTATCG 601
||.|.||.||.||..|.||.||.||.||.|| ||.| ||||| ||
BPUM_3566 560 CGCAGTTAACGGCTTTACTAGGCGCAGGAAATACAGAATTTC---TA--- 603
BSNT_06027___ 602 GGCTT-CCTGTAACCGCTGCCACT---TATTCGTCAACGGTCATCCCGAT 647
||||| ||.|| .|.||||..| ||.||.|||.|||||||.|||||
BPUM_3566 604 GGCTTACCAGT---GGTTGCCGTTGTGTACTCTTCATCGGTCATTCCGAT 650
BSNT_06027___ 648 TTTGCTGGCGATATGGATTGCTTCATACGTGGAAAAAT----------GG 687
|.|.||..|.||.|||.|.|..|||||.||.||||||| |.
BPUM_3566 651 TCTACTTACCATCTGGCTCGGCTCATATGTTGAAAAATTCGCAGAAAAGT 700
BSNT_06027___ 688 ATTGACCGTTTTACACACGCATCTCTCAAATTGATTGTGGTTCCGACATT 737
||.|.||| ..|||..|.||..|.||..|.|||||.||..|
BPUM_3566 701 ATAGTCCG----------AAATCATTAAAGATCATCCTTGTTCCAACGGT 740
BSNT_06027___ 738 CACGC-TATTGATTGTCGTGCCGCTGACATTGATTACAGTCGGTCCGCTT 786
.||.| |.||| |.||.||.||..|.|...||||..|.||.||.||||||
BPUM_3566 741 TACACTTCTTG-TCGTAGTACCAATTATGCTGATCGCGGTAGGACCGCTT 789
BSNT_06027___ 787 GGCGCTATTTTAGGAGAATACTTGTC-TTCTGG-GGTCAATT-AT---TT 830
||.|..|||.|.||| |.|.||| |||.|| || |||| || ||
BPUM_3566 790 GGTGGAATTATCGGA----AATGGTCTTTCAGGTGG--AATTGATTTATT 833
BSNT_06027___ 831 GTTTGATCATGCAGGGCTTGTGGC--GA----TGATTTTGCTGGCGGGTA 874
|||..|.||||||||..||.|||| || |||| .|||||.|.
BPUM_3566 834 GTTCAAACATGCAGGCATTTTGGCCGGACTCTTGAT-----CGGCGGCTT 878
BSNT_06027___ 875 CAT-TC-TCTTTAATCATTATGACGGGCATGCACTATGC----CTTTGTG 918
||| || .|.||.|||||| |||||.||||||||||| |||
BPUM_3566 879 CATGTCACCATTGATCATT---ACGGGTATGCACTATGCACTGCTT---- 921
BSNT_06027___ 919 CCGATTATGATCAACAACAT--CGCTCAAAACGGCCACGATTATTTACTG 966
||.||.|||||||||||||| ||.| |||||| |.||.|||.
BPUM_3566 922 CCAATCATGATCAACAACATTACGTT--AAACGG-------TTTTGACTT 962
BSNT_06027___ 967 CCGGCT-------ATGTTTTTGGCGAATATGGGGCAGGCGGGAGCATCAT 1009
|...|| ||||||.|.||||||||||..||.||.||.|||.|||
BPUM_3566 963 CATTCTTCCAATGATGTTTGTAGCGAATATGGCACAAGCAGGCGCAGCAT 1012
BSNT_06027___ 1010 TTGCAGTCTTCCTTCGCTCCAGAAACAAAAAATTTAAATCACTCGCGCTT 1059
|.|..||.|||.|..|.||.|.||||||||.|||.||||||.|.|||.|.
BPUM_3566 1013 TCGGTGTGTTCTTAAGATCAAAAAACAAAACATTCAAATCATTGGCGATG 1062
BSNT_06027___ 1060 ACCACAAGCATCACGGCGCTGATGGGGATCACAGAACCTGCAATGTACGG 1109
.|.|||||.||.||.||..|.|||||.||.||.||||||||.|||||.||
BPUM_3566 1063 TCTACAAGTATTACTGCATTAATGGGTATTACTGAACCTGCTATGTATGG 1112
BSNT_06027___ 1110 CGTGAATATGCGATTGAAAAAGCCGT---TTGCGGCCGCTTTGATTGGCG 1156
.|||||.||||||||||||||.|||| ||||.||| .|.||| |
BPUM_3566 1113 TGTGAACATGCGATTGAAAAAACCGTTCCTTGCAGCC---CTCATT---G 1156
BSNT_06027___ 1157 GTGCAGCCGGTGGC-GCGTTTTACGGCATGACGGGTGTTGCT-------- 1197
|||||||.|..||| ||||.|| ||||.| |.|.|| |
BPUM_3566 1157 GTGCAGCAGTAGGCGGCGTGTT----CATGTC-GATCTT--TAAAGTAAA 1199
BSNT_06027___ 1198 -TCCTAT---ATCGTCGGGGGGAAT--GCAGGTCTCCCGAGCATCCCTGT 1241
||.||| || .||.|| || |||||||||||..|..||||...
BPUM_3566 1200 ATCATATGTGAT-ATCTGG----ATCAGCAGGTCTCCCAGGTCTCCCAAC 1244
BSNT_06027___ 1242 CTTTATCGGCCCAACGTTTATTTACGCGATGATCGGCCTTGTGATTGCGT 1291
.||.||.||||||||.|||.|.|||.|.||.||.|||.|.||.||.||.|
BPUM_3566 1245 ATTCATTGGCCCAACATTTGTCTACTCTATCATTGGCTTAGTAATCGCCT 1294
BSNT_06027___ 1292 TTGCGGCGGGAAC-AGCAGCTG---CGTATTTGCTTGGATTCGAGGATGT 1337
|||..|..|.||| |.|| || |.|.|| ||.||||||.|.|||||
BPUM_3566 1295 TTGTCGTAGCAACGATCA--TGACACTTGTT--CTAGGATTCAAAGATGT 1340
BSNT_06027___ 1338 GCCTTCTGACGGCAGCCAGCAGCCGGCAGTGCATGAGG--------GCAG 1379
.| |||||.|.||.| ||||
BPUM_3566 1341 AC------------------------CAGTGAAAGATGATACAAAAGCAG 1366
BSNT_06027___ 1380 ------CAGAGAGA---------------------TCA-----------T 1391
|||| ||| ||| |
BPUM_3566 1367 ACAAACCAGA-AGAAAAGAAAGACACAGTAATACTTCAAAATGAAGTAGT 1415
BSNT_06027___ 1392 TCACAGCCCGATTAAGGGAGAAGTGAAAGCC-TTAAGTGAAGTCAAAGAT 1440
.||.||.||..||.|.||..|| |.|||||| .|||.|.||||.||.|||
BPUM_3566 1416 ACAAAGTCCACTTGAAGGTCAA-TTAAAGCCGCTAAATCAAGTAAATGAT 1464
BSNT_06027___ 1441 GGAGTATTTTCTGTCGGGATCATGGGAAAAGGATTTGCCATTGAGCCTGA 1490
|.|..|||.|||...|..||||||||.|||||....|||||||..||.|.
BPUM_3566 1465 GCAACATTCTCTAATGAAATCATGGGGAAAGGTACAGCCATTGTCCCAGC 1514
BSNT_06027___ 1491 AGAAGGAGAAGTTGTGTCGCCTGTTC-GTGG-AAGCGTTACCACCATTTT 1538
|...|||...||.||..|.|| .||| .||| ||| |||...||||||||
BPUM_3566 1515 AATTGGACGTGTAGTAGCACC-ATTCAATGGCAAG-GTTGAAACCATTTT 1562
BSNT_06027___ 1539 TAAAACAAAACACGCAATTGGCATTACGAGTGATCAGGGAGCTGAAATAC 1588
|.||||.|||||.||.||||||.|.|.||||||.||.||..||||..|.|
BPUM_3566 1563 TCAAACGAAACATGCCATTGGCTTAAAGAGTGACCAAGGCACTGAGCTTC 1612
BSNT_06027___ 1589 TCATACACATTGGATTGGACACGGTAAAGCTGGAGGGACAATGGTTCACG 1638
||||.||..|||||.|.||.|||||.|||||.|..|||.||...|||||.
BPUM_3566 1613 TCATTCATGTTGGAATAGATACGGTGAAGCTCGGCGGAAAACATTTCACA 1662
BSNT_06027___ 1639 GTTCACGTCAAAGA---AGGCG-------ACAAGGTCGCACCGGGAGATC 1678
..|||.|| ||| |||.| ||||| |.||||||.
BPUM_3566 1663 AGTCATGT---AGAGTCAGGTGATTTTGTACAAG-------CAGGAGATG 1702
BSNT_06027___ 1679 CGCTCGTGTCCTTTGATCTGGA--GCAAATCA--AAGACGCGGGATATGA 1724
..|||||....||||||.|.|| || |.||| |||| .||.|||||
BPUM_3566 1703 TACTCGTTGAATTTGATATCGAGGGC-ATTCAACAAGA---AGGCTATGA 1748
BSNT_06027___ 1725 CGTCATTACTCCGGTGATCGTGACCAACACAGACCAATATTCA----TTT 1770
.||||..||.||..|.||.||||||||||||.||.|.|.|.|| ||
BPUM_3566 1749 TGTCACCACACCAATTATTGTGACCAACACAAACGATTTTGCACAAGTT- 1797
BSNT_06027___ 1771 TCGCCGGTG---AAAGAGA----------TCGGTA-AAG------TGC-- 1798
|.|| |||.||| ||.||| ||| |||
BPUM_3566 1798 -----GATGCGAAAACAGAAGGCACGATTTCAGTACAAGAGACACTGCTC 1842
BSNT_06027___ 1799 --------------AGACAAA--AGAAGCGCTGCTTGCTTTATCTTGA-- 1830
||| ||| ||.||.|| .||.|.|.|||
BPUM_3566 1843 ACAGTCAGTGTAGAAGA-AAATGAGGAGGGC------ATTCAACATGAAC 1885
BSNT_06027___ 1830 ----------------------- 1830
BPUM_3566 1886 AAGTTAGAAAAAACATTTCCTAA 1908
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.