Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03507 and BPUM_3547

See Amino acid alignment / Visit BSNT_03507 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence dna-align/BSNT_03507___aspA.1.24716.seq
#    -bsequence dna-align/BPUM_3547___ansB2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03507___aspA-BPUM_3547___ansB2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03507___aspA-BPUM_3547___ansB2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03507___aspA
# 2: BPUM_3547___ansB2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1433
# Identity:    1102/1433 (76.9%)
# Similarity:  1102/1433 (76.9%)
# Gaps:          16/1433 ( 1.1%)
# Score: 4166.0
# 
#
#=======================================

BSNT_03507___      1 AT-GTTAAACGGCCAAAAAGAA--TATCGCGTGGAAAAAGACTTCCTTGG     47
                     || |||.||  ||       ||  ||||||...||.||.||.||.|||||
BPUM_3547___a      1 ATGGTTCAA--GC-------AACTTATCGCTATGAGAAGGATTTTCTTGG     41

BSNT_03507___     48 GGAAAAACAAATTGAAGCAGATGTTTATTACGGAATTCAGACGCTCCGTG     97
                     .||||||.|||||..||||||.||.|||||.|||.||||.||.||.||||
BPUM_3547___a     42 AGAAAAAGAAATTCTAGCAGACGTGTATTATGGAGTTCAAACCCTTCGTG     91

BSNT_03507___     98 CTTCTGAAAATTTCCCGATCACAGGATACAAAATCCATGAGGAAATGATT    147
                     |....||||||||||||||.||.||||||...||.|||||||||.|||||
BPUM_3547___a     92 CAAAGGAAAATTTCCCGATTACGGGATACCGCATGCATGAGGAACTGATT    141

BSNT_03507___    148 AACGCACTGGCGATTGTGAAAAAAGCTGCGGCTCTTGCCAACATGGACGT    197
                     |..||..|.||.||.|||||||||||.||.||||..|||||.|||||.||
BPUM_3547___a    142 AGAGCCTTTGCCATCGTGAAAAAAGCAGCAGCTCAAGCCAATATGGAAGT    191

BSNT_03507___    198 GAAACGGCTGTATGAAGGAATTGGCCAAGCTATCGTACAAGCCGCTGACG    247
                     ...|||..|.||||||||||||||..|.||.|||||||||||..||||.|
BPUM_3547___a    192 TGGACGTTTATATGAAGGAATTGGAAATGCCATCGTACAAGCTTCTGATG    241

BSNT_03507___    248 AGATTCTGGAAGGCAAGTGGCACGATCAGTTTATCGTCGATCCGATTCAG    297
                     ||.|..|.|||||.||...|||.||..|.|||||.||.||.||.|||||.
BPUM_3547___a    242 AGGTCATTGAAGGTAAACTGCATGAGTACTTTATTGTAGACCCAATTCAA    291

BSNT_03507___    298 GGCGGTGCCGGAACTTCTATGAACATGAACGCGAATGAGGTTATCGGAAA    347
                     |||||.||.|||||.||.|||||.|||||.||.|||||.||.||.|||||
BPUM_3547___a    292 GGCGGCGCAGGAACGTCGATGAATATGAATGCCAATGAAGTCATTGGAAA    341

BSNT_03507___    348 CCGGGCGCTTGAAATCATGGGACATAAAAAGGGAGATTATATCCATTTAA    397
                     |.|.|||||.|||||||||||||||.|||||||.||.||.||.|||||||
BPUM_3547___a    342 CAGAGCGCTAGAAATCATGGGACATCAAAAGGGTGAATACATTCATTTAA    391

BSNT_03507___    398 GTCCAAACACACATGTGAACATGTCACAGTCTACGAACGATGTGTTCCCG    447
                     |.||||||||||||||.|||||||||||.||.|||||.||...|||.||.
BPUM_3547___a    392 GCCCAAACACACATGTTAACATGTCACAATCCACGAATGACTCGTTTCCA    441

BSNT_03507___    448 ACTGCTATCCATATTTCCACATTGAAGCTCTTAGAAAAACTGCTGAAAAC    497
                     ||.||||||||||||.|...||||||||..|||||.|..|||||..|.||
BPUM_3547___a    442 ACAGCTATCCATATTGCTGTATTGAAGCAATTAGACATTCTGCTTGAGAC    491

BSNT_03507___    498 AATGGAAGATATGCATAGTGTGTTTAAGCAAAAAGCACAGGAGTTTGACT    547
                     ||||.||...|||||....||.||..|..|.|||||..|.||.||||| |
BPUM_3547___a    492 AATGCAAACGATGCAGGACGTATTCCAAAAGAAAGCGAAAGAATTTGA-T    540

BSNT_03507___    548 C-TGTTATTAAAATGGGCCGGACACACCTTCAAGATGCGGTTCCCATCCG    596
                     | |||.||.||||||||.||.||.|||||.||.|||||.|||||.||.||
BPUM_3547___a    541 CATGTGATCAAAATGGGACGTACGCACCTGCAGGATGCTGTTCCAATTCG    590

BSNT_03507___    597 TCTTGGCCAGGAATTCGAAGCTTACAGCCGTGTTCTCGAG-CGTGATATC    645
                     |.|.||.||||||||.||||||||||||||.||.||| || ||.|||||.
BPUM_3547___a    591 TTTAGGACAGGAATTTGAAGCTTACAGCCGCGTGCTC-AGCCGCGATATT    639

BSNT_03507___    646 AAACGAATCAAGCAATCGCGCCAGCACCTATATGAAGTCAACATGGGCGC    695
                     ||.||.|||||.|||||....|||||..|||||||||||||.|||||.||
BPUM_3547___a    640 AAGCGGATCAACCAATCAAAGCAGCATTTATATGAAGTCAATATGGGTGC    689

BSNT_03507___    696 AACTGCTGTTGGTACAGGGCTGAACGCTGATCCTGAATATATCAAACAGG    745
                     |||.||.|||||.|||||.||.|||||.||||||...|||||..|....|
BPUM_3547___a    690 AACAGCAGTTGGGACAGGCCTAAACGCAGATCCTCGTTATATTGAGATCG    739

BSNT_03507___    746 TAGTAAAGCACCTTGCTGATATTAGCGGGCTTCCTCTTGTCGGCGCTGAT    795
                     |.||.|||.|.||.||.||||||...||.|||||.|||||.|||||.||.
BPUM_3547___a    740 TCGTGAAGAAGCTAGCCGATATTTCTGGCCTTCCGCTTGTAGGCGCAGAG    789

BSNT_03507___    796 CATCTTGTTGATGCGACACAAAATACAGATGCCTATACAGAGGTATCAGC    845
                     ||||||||.|||||.||.||||||||||||||.||.||||||||.||.||
BPUM_3547___a    790 CATCTTGTAGATGCAACGCAAAATACAGATGCGTACACAGAGGTGTCTGC    839

BSNT_03507___    846 TTCATTAAAAGTCTGCATGATGAACATGTCGAAGATCGCAAACGACCTGC    895
                     |.||||||||||.|||||||||||||||||.|||||.||.||.|||||.|
BPUM_3547___a    840 TGCATTAAAAGTATGCATGATGAACATGTCTAAGATTGCCAATGACCTTC    889

BSNT_03507___    896 GCTTAATGGCGTCGGGACCGCGCGCCGGACTTGCGGAAATTTCTCTGCCT    945
                     |..|||||||.||.||.||.||.||.||.|||||.||||||.|..||||.
BPUM_3547___a    890 GTCTAATGGCTTCTGGTCCACGTGCAGGTCTTGCTGAAATTGCATTGCCA    939

BSNT_03507___    946 GCACGTCAGCCGGGCTCATCTATTATGCCGGGGAAAGTCAATCCGGTTAT    995
                     ||.||||||||.||.|||||.||||||||.||||||||||||||.|||||
BPUM_3547___a    940 GCTCGTCAGCCAGGATCATCCATTATGCCTGGGAAAGTCAATCCAGTTAT    989

BSNT_03507___    996 GGCGGAGCTGATCAACCAAATTGCGTTCCAGGTTATCGGAAACGACAATA   1045
                     |||.|||||.||.||||||||.||.||||||||.||.||.||.|||.|.|
BPUM_3547___a    990 GGCAGAGCTCATTAACCAAATCGCATTCCAGGTCATTGGGAATGACCACA   1039

BSNT_03507___   1046 CAATCTGCCTTGCTTCAGAAGCCGGCCAGCTTGAGTTGAACGTCATGGAG   1095
                     |.|||||.|||||.||.|||||.||.|||||||||||.||.||.||||||
BPUM_3547___a   1040 CCATCTGTCTTGCCTCTGAAGCAGGTCAGCTTGAGTTAAATGTGATGGAG   1089

BSNT_03507___   1096 CCCGTGCTTGTCTTTAATTTGCTTCAATCCATCAGCATCATGAACAACGG   1145
                     ||.||..|.||||||||.||.||||||||.||.||.||.|||||.|||||
BPUM_3547___a   1090 CCTGTTTTGGTCTTTAACTTACTTCAATCTATTAGTATAATGAATAACGG   1139

BSNT_03507___   1146 CTTCCGTTCGTTCACTGATCATTGCTTAAAAGGCATCGAAGCCAACGAAA   1195
                     |||||||||.|||||.||||||||||||...|.|||.|||||.||.||||
BPUM_3547___a   1140 CTTCCGTTCATTCACAGATCATTGCTTAGTGGACATTGAAGCAAATGAAA   1189

BSNT_03507___   1196 AGCGGTTGAAGCAATATGTAGAAAAAAGCGCTGGAGTGATCACTGCAGTC   1245
                     |.||.|||||..|||||||||||||||||||.||.||||||||||||||.
BPUM_3547___a   1190 AACGTTTGAAAGAATATGTAGAAAAAAGCGCAGGCGTGATCACTGCAGTG   1239

BSNT_03507___   1246 AATCCGCATCTTGGGTATGAAGCGGCAGCTAGAATTGCCAGGGAAGCAAT   1295
                     |||||.|||.|.||.||||||||.||.||||||||.||.||||||||.||
BPUM_3547___a   1240 AATCCTCATTTAGGCTATGAAGCAGCGGCTAGAATCGCTAGGGAAGCCAT   1289

BSNT_03507___   1296 TATGACAGGGCAATCTGTCCGGGATCTTTGTCTGCAGCATGATGTGCTGA   1345
                     |.|.|||||.|||||..||.|.||||||||..||||..||||||||.|.|
BPUM_3547___a   1290 TTTAACAGGACAATCGATCAGAGATCTTTGCTTGCAAAATGATGTGTTAA   1339

BSNT_03507___   1346 CTGAAGAAGAATTGGATATTATTTTAAACCCATATGAGATGACCAAACCA   1395
                     |.|||||||||.|.|||||||||||.||.||||..||||||||.||.||.
BPUM_3547___a   1340 CAGAAGAAGAACTTGATATTATTTTGAATCCATTCGAGATGACAAAGCCT   1389

BSNT_03507___   1396 GGTATCGCAGGGAAAGAACTATTAGAAAAATAA   1428
                     ||.||.||.||...|||.||..||||...||||
BPUM_3547___a   1390 GGAATTGCGGGTGCAGAGCTCCTAGAGCGATAA   1422


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