Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03507 and BPUM_3547
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:02
# Commandline: needle
# -asequence dna-align/BSNT_03507___aspA.1.24716.seq
# -bsequence dna-align/BPUM_3547___ansB2.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03507___aspA-BPUM_3547___ansB2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03507___aspA-BPUM_3547___ansB2.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03507___aspA
# 2: BPUM_3547___ansB2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1433
# Identity: 1102/1433 (76.9%)
# Similarity: 1102/1433 (76.9%)
# Gaps: 16/1433 ( 1.1%)
# Score: 4166.0
#
#
#=======================================
BSNT_03507___ 1 AT-GTTAAACGGCCAAAAAGAA--TATCGCGTGGAAAAAGACTTCCTTGG 47
|| |||.|| || || ||||||...||.||.||.||.|||||
BPUM_3547___a 1 ATGGTTCAA--GC-------AACTTATCGCTATGAGAAGGATTTTCTTGG 41
BSNT_03507___ 48 GGAAAAACAAATTGAAGCAGATGTTTATTACGGAATTCAGACGCTCCGTG 97
.||||||.|||||..||||||.||.|||||.|||.||||.||.||.||||
BPUM_3547___a 42 AGAAAAAGAAATTCTAGCAGACGTGTATTATGGAGTTCAAACCCTTCGTG 91
BSNT_03507___ 98 CTTCTGAAAATTTCCCGATCACAGGATACAAAATCCATGAGGAAATGATT 147
|....||||||||||||||.||.||||||...||.|||||||||.|||||
BPUM_3547___a 92 CAAAGGAAAATTTCCCGATTACGGGATACCGCATGCATGAGGAACTGATT 141
BSNT_03507___ 148 AACGCACTGGCGATTGTGAAAAAAGCTGCGGCTCTTGCCAACATGGACGT 197
|..||..|.||.||.|||||||||||.||.||||..|||||.|||||.||
BPUM_3547___a 142 AGAGCCTTTGCCATCGTGAAAAAAGCAGCAGCTCAAGCCAATATGGAAGT 191
BSNT_03507___ 198 GAAACGGCTGTATGAAGGAATTGGCCAAGCTATCGTACAAGCCGCTGACG 247
...|||..|.||||||||||||||..|.||.|||||||||||..||||.|
BPUM_3547___a 192 TGGACGTTTATATGAAGGAATTGGAAATGCCATCGTACAAGCTTCTGATG 241
BSNT_03507___ 248 AGATTCTGGAAGGCAAGTGGCACGATCAGTTTATCGTCGATCCGATTCAG 297
||.|..|.|||||.||...|||.||..|.|||||.||.||.||.|||||.
BPUM_3547___a 242 AGGTCATTGAAGGTAAACTGCATGAGTACTTTATTGTAGACCCAATTCAA 291
BSNT_03507___ 298 GGCGGTGCCGGAACTTCTATGAACATGAACGCGAATGAGGTTATCGGAAA 347
|||||.||.|||||.||.|||||.|||||.||.|||||.||.||.|||||
BPUM_3547___a 292 GGCGGCGCAGGAACGTCGATGAATATGAATGCCAATGAAGTCATTGGAAA 341
BSNT_03507___ 348 CCGGGCGCTTGAAATCATGGGACATAAAAAGGGAGATTATATCCATTTAA 397
|.|.|||||.|||||||||||||||.|||||||.||.||.||.|||||||
BPUM_3547___a 342 CAGAGCGCTAGAAATCATGGGACATCAAAAGGGTGAATACATTCATTTAA 391
BSNT_03507___ 398 GTCCAAACACACATGTGAACATGTCACAGTCTACGAACGATGTGTTCCCG 447
|.||||||||||||||.|||||||||||.||.|||||.||...|||.||.
BPUM_3547___a 392 GCCCAAACACACATGTTAACATGTCACAATCCACGAATGACTCGTTTCCA 441
BSNT_03507___ 448 ACTGCTATCCATATTTCCACATTGAAGCTCTTAGAAAAACTGCTGAAAAC 497
||.||||||||||||.|...||||||||..|||||.|..|||||..|.||
BPUM_3547___a 442 ACAGCTATCCATATTGCTGTATTGAAGCAATTAGACATTCTGCTTGAGAC 491
BSNT_03507___ 498 AATGGAAGATATGCATAGTGTGTTTAAGCAAAAAGCACAGGAGTTTGACT 547
||||.||...|||||....||.||..|..|.|||||..|.||.||||| |
BPUM_3547___a 492 AATGCAAACGATGCAGGACGTATTCCAAAAGAAAGCGAAAGAATTTGA-T 540
BSNT_03507___ 548 C-TGTTATTAAAATGGGCCGGACACACCTTCAAGATGCGGTTCCCATCCG 596
| |||.||.||||||||.||.||.|||||.||.|||||.|||||.||.||
BPUM_3547___a 541 CATGTGATCAAAATGGGACGTACGCACCTGCAGGATGCTGTTCCAATTCG 590
BSNT_03507___ 597 TCTTGGCCAGGAATTCGAAGCTTACAGCCGTGTTCTCGAG-CGTGATATC 645
|.|.||.||||||||.||||||||||||||.||.||| || ||.|||||.
BPUM_3547___a 591 TTTAGGACAGGAATTTGAAGCTTACAGCCGCGTGCTC-AGCCGCGATATT 639
BSNT_03507___ 646 AAACGAATCAAGCAATCGCGCCAGCACCTATATGAAGTCAACATGGGCGC 695
||.||.|||||.|||||....|||||..|||||||||||||.|||||.||
BPUM_3547___a 640 AAGCGGATCAACCAATCAAAGCAGCATTTATATGAAGTCAATATGGGTGC 689
BSNT_03507___ 696 AACTGCTGTTGGTACAGGGCTGAACGCTGATCCTGAATATATCAAACAGG 745
|||.||.|||||.|||||.||.|||||.||||||...|||||..|....|
BPUM_3547___a 690 AACAGCAGTTGGGACAGGCCTAAACGCAGATCCTCGTTATATTGAGATCG 739
BSNT_03507___ 746 TAGTAAAGCACCTTGCTGATATTAGCGGGCTTCCTCTTGTCGGCGCTGAT 795
|.||.|||.|.||.||.||||||...||.|||||.|||||.|||||.||.
BPUM_3547___a 740 TCGTGAAGAAGCTAGCCGATATTTCTGGCCTTCCGCTTGTAGGCGCAGAG 789
BSNT_03507___ 796 CATCTTGTTGATGCGACACAAAATACAGATGCCTATACAGAGGTATCAGC 845
||||||||.|||||.||.||||||||||||||.||.||||||||.||.||
BPUM_3547___a 790 CATCTTGTAGATGCAACGCAAAATACAGATGCGTACACAGAGGTGTCTGC 839
BSNT_03507___ 846 TTCATTAAAAGTCTGCATGATGAACATGTCGAAGATCGCAAACGACCTGC 895
|.||||||||||.|||||||||||||||||.|||||.||.||.|||||.|
BPUM_3547___a 840 TGCATTAAAAGTATGCATGATGAACATGTCTAAGATTGCCAATGACCTTC 889
BSNT_03507___ 896 GCTTAATGGCGTCGGGACCGCGCGCCGGACTTGCGGAAATTTCTCTGCCT 945
|..|||||||.||.||.||.||.||.||.|||||.||||||.|..||||.
BPUM_3547___a 890 GTCTAATGGCTTCTGGTCCACGTGCAGGTCTTGCTGAAATTGCATTGCCA 939
BSNT_03507___ 946 GCACGTCAGCCGGGCTCATCTATTATGCCGGGGAAAGTCAATCCGGTTAT 995
||.||||||||.||.|||||.||||||||.||||||||||||||.|||||
BPUM_3547___a 940 GCTCGTCAGCCAGGATCATCCATTATGCCTGGGAAAGTCAATCCAGTTAT 989
BSNT_03507___ 996 GGCGGAGCTGATCAACCAAATTGCGTTCCAGGTTATCGGAAACGACAATA 1045
|||.|||||.||.||||||||.||.||||||||.||.||.||.|||.|.|
BPUM_3547___a 990 GGCAGAGCTCATTAACCAAATCGCATTCCAGGTCATTGGGAATGACCACA 1039
BSNT_03507___ 1046 CAATCTGCCTTGCTTCAGAAGCCGGCCAGCTTGAGTTGAACGTCATGGAG 1095
|.|||||.|||||.||.|||||.||.|||||||||||.||.||.||||||
BPUM_3547___a 1040 CCATCTGTCTTGCCTCTGAAGCAGGTCAGCTTGAGTTAAATGTGATGGAG 1089
BSNT_03507___ 1096 CCCGTGCTTGTCTTTAATTTGCTTCAATCCATCAGCATCATGAACAACGG 1145
||.||..|.||||||||.||.||||||||.||.||.||.|||||.|||||
BPUM_3547___a 1090 CCTGTTTTGGTCTTTAACTTACTTCAATCTATTAGTATAATGAATAACGG 1139
BSNT_03507___ 1146 CTTCCGTTCGTTCACTGATCATTGCTTAAAAGGCATCGAAGCCAACGAAA 1195
|||||||||.|||||.||||||||||||...|.|||.|||||.||.||||
BPUM_3547___a 1140 CTTCCGTTCATTCACAGATCATTGCTTAGTGGACATTGAAGCAAATGAAA 1189
BSNT_03507___ 1196 AGCGGTTGAAGCAATATGTAGAAAAAAGCGCTGGAGTGATCACTGCAGTC 1245
|.||.|||||..|||||||||||||||||||.||.||||||||||||||.
BPUM_3547___a 1190 AACGTTTGAAAGAATATGTAGAAAAAAGCGCAGGCGTGATCACTGCAGTG 1239
BSNT_03507___ 1246 AATCCGCATCTTGGGTATGAAGCGGCAGCTAGAATTGCCAGGGAAGCAAT 1295
|||||.|||.|.||.||||||||.||.||||||||.||.||||||||.||
BPUM_3547___a 1240 AATCCTCATTTAGGCTATGAAGCAGCGGCTAGAATCGCTAGGGAAGCCAT 1289
BSNT_03507___ 1296 TATGACAGGGCAATCTGTCCGGGATCTTTGTCTGCAGCATGATGTGCTGA 1345
|.|.|||||.|||||..||.|.||||||||..||||..||||||||.|.|
BPUM_3547___a 1290 TTTAACAGGACAATCGATCAGAGATCTTTGCTTGCAAAATGATGTGTTAA 1339
BSNT_03507___ 1346 CTGAAGAAGAATTGGATATTATTTTAAACCCATATGAGATGACCAAACCA 1395
|.|||||||||.|.|||||||||||.||.||||..||||||||.||.||.
BPUM_3547___a 1340 CAGAAGAAGAACTTGATATTATTTTGAATCCATTCGAGATGACAAAGCCT 1389
BSNT_03507___ 1396 GGTATCGCAGGGAAAGAACTATTAGAAAAATAA 1428
||.||.||.||...|||.||..||||...||||
BPUM_3547___a 1390 GGAATTGCGGGTGCAGAGCTCCTAGAGCGATAA 1422
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