Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05884 and BPUM_3495
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:27
# Commandline: needle
# -asequence dna-align/BSNT_05884___ywaC.1.24716.seq
# -bsequence dna-align/BPUM_3495___ywaC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05884___ywaC-BPUM_3495___ywaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05884___ywaC-BPUM_3495___ywaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05884___ywaC
# 2: BPUM_3495___ywaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 644
# Identity: 485/644 (75.3%)
# Similarity: 485/644 (75.3%)
# Gaps: 22/644 ( 3.4%)
# Score: 1780.5
#
#
#=======================================
BSNT_05884___ 1 ATGGATTTATCTGTAACACATATGGACGATTT-AAAAACAGTAATGGAAG 49
|||.||.|.||.|.|||.|||.|.||.||||| |||||| ||.|||||||
BPUM_3495___y 1 ATGAATATGTCAGCAACTCATGTAGAAGATTTGAAAAAC-GTCATGGAAG 49
BSNT_05884___ 50 ATTGGAAAAATGAATTATTAGTTTATAAATTTGCGCTAGATGCGCTCGAT 99
|.||||||||||||||||||||.|||||||||||..||||||...|.|||
BPUM_3495___y 50 ACTGGAAAAATGAATTATTAGTATATAAATTTGCATTAGATGAAATGGAT 99
BSNT_05884___ 100 ACAAAGTTCTCAATTATCAGCCAGGAATATAACCTCATTCACGGACACAA 149
||.|||||.|||||.||.|||||.||||||||..|.||.||.||.|||||
BPUM_3495___y 100 ACGAAGTTTTCAATCATTAGCCAAGAATATAATTTAATCCATGGCCACAA 149
BSNT_05884___ 150 CCCGATTGAACATACAAAATCCCGTGTCAAAAGCTTTGAAAGCATCGTGA 199
.||.||.||.|||||||||||.||..|||||..||||||||||||.||.|
BPUM_3495___y 150 TCCAATAGAGCATACAAAATCACGGATCAAATCCTTTGAAAGCATTGTAA 199
BSNT_05884___ 200 ATAAGTTAATGAGAAAGGGCTGTGAGATTACGACGAAGGA-AATG----A 244
||||.|||...|||||.||.||.||.||.||.|| | |||| |
BPUM_3495___y 200 ATAAATTAGCAAGAAAAGGATGCGACATCACAAC-----ACAATGTGCCA 244
BSNT_05884___ 245 AGGAGCATATTCACGACATTGCCGGCGTGCGCATCATCTGTTCCTTTATT 294
|||||.|||||||.||.||.||.||.||.|||||||||||.|||||||||
BPUM_3495___y 245 AGGAGTATATTCATGATATCGCAGGTGTCCGCATCATCTGCTCCTTTATT 294
BSNT_05884___ 295 TCTGACATTTATAATGTCGTGAATGTGTTGAAGCAGCATGAAGATTTGAG 344
...||.||.||||||.|..|..||||.||||.|||....||.|||.|.|.
BPUM_3495___y 295 CAAGATATCTATAATATTATCGATGTATTGAGGCAAAGAGAGGATCTAAC 344
BSNT_05884___ 345 AATCGTAAAGGTAAAGGATTATATCCAGACA-CCCAAACCGAATGGCTAT 393
||||.|..|.||.||.|||||.||.|| ||| ||.|||||.||||||||.
BPUM_3495___y 345 AATCCTTGAAGTGAAAGATTACATTCA-ACATCCAAAACCAAATGGCTAC 393
BSNT_05884___ 394 CGAAGCCTGCATTTAATCATTGAGATGCCTGTGAATTTAACGAACCGTGT 443
.||||.||.||||||||..|.|||||.|||||..|.||||||||.|||||
BPUM_3495___y 394 AGAAGTCTTCATTTAATTGTGGAGATTCCTGTCTACTTAACGAATCGTGT 443
BSNT_05884___ 444 GGAATACGTCAAAGCAGAAATTCAAATCCGGACAATCGCGATGGATTTCT 493
|||..|.||.||.|..||.|||||..|.|||||.||.|||||||||||.|
BPUM_3495___y 444 GGAGCATGTGAAGGTTGAGATTCAGGTGCGGACCATAGCGATGGATTTTT 493
BSNT_05884___ 494 GGGCGAGCCTTGAACATAAAATTTATTATAAATTGAACAATGACGTTCCT 543
|||||||.||||||||||||||.||||||||||||.|.||.||.||||||
BPUM_3495___y 494 GGGCGAGTCTTGAACATAAAATCTATTATAAATTGCAAAACGATGTTCCT 543
BSNT_05884___ 544 AAGCAATTAACAGATGAGCTGAAGGAAGCCGCGGAGATTGCCCATTACCT 593
.|.||..||||.|||||.|||||||||||.||.||.||.|||||||||.|
BPUM_3495___y 544 CATCAGCTAACCGATGAACTGAAGGAAGCGGCTGATATAGCCCATTACTT 593
BSNT_05884___ 594 AGATGAGAAAATGC----TGGGGATTAAGAAAGAAGTGGATTAG 633
||||||.||||||| | |||||...||||.|.||||||
BPUM_3495___y 594 AGATGAAAAAATGCAAAAT----ATTAAACGAGAAATTGATTAG 633
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