Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05774 and BPUM_3421
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:21
# Commandline: needle
# -asequence dna-align/BSNT_05774___ywfC.1.24716.seq
# -bsequence dna-align/BPUM_3421___bacB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05774___ywfC-BPUM_3421___bacB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05774___ywfC-BPUM_3421___bacB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05774___ywfC
# 2: BPUM_3421___bacB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 744
# Identity: 521/744 (70.0%)
# Similarity: 521/744 (70.0%)
# Gaps: 72/744 ( 9.7%)
# Score: 1756.0
#
#
#=======================================
BSNT_05774___ 1 ATGAAAACTAAAGAAGATATGCAGGAGCTTTATTTCCCGACA--CC--GA 46
|||.|||||.||.||.|.|.|||.||.|..|||||.|| ||| || ||
BPUM_3421___b 1 ATGCAAACTGAACAAAAGACGCAAGAACGATATTTTCC-ACAAGCCAAGA 49
BSNT_05774___ 47 AATTAATTGAATGGGAAAACGGAGTGAGGCAGTATTCAACCGTACGAGGG 96
| |||.||||||||.||.||.||.|..||.|||||.||.||..||||.
BPUM_3421___b 50 A---AATAGAATGGGAGAATGGTGTCACACAATATTCCACAGTCAGAGGT 96
BSNT_05774___ 97 GATACTGAAGTATTAATGTCTTACGTCCCGCCGCATACCAATGTTGAACC 146
|||||.|||||||||||.||.||||||||.||.||.||.|...|||||||
BPUM_3421___b 97 GATACGGAAGTATTAATCTCATACGTCCCTCCTCACACGATCATTGAACC 146
BSNT_05774___ 147 CCATCAGCAT----AAGGAGGTCCAAATCGGCATGGTCGTTTCT----GG 188
.||..||||| |||.| |||||||||| ||||.| | ||
BPUM_3421___b 147 TCACGAGCATCCCGAAGCA----CAAATCGGCA---TCGTAT-TAAAAGG 188
BSNT_05774___ 189 CGAGCTGATGATGACTGTCGG-----AGATGTGACAAGAAAAATGA--CA 231
||||||....|||||.||||| .||| ..|||.| ||
BPUM_3421___b 189 CGAGCTTCAAATGACGGTCGGCCCATCGAT---------CCAATTACTCA 229
BSNT_05774___ 232 GCC--TTGGAATCTGCCTATATCGCGCCGCCGCATGTGCCTCACGGGGCA 279
.|| ||.|||||.|||||||||||.||.||...|||.||||||||.||.
BPUM_3421___b 230 CCCCTTTAGAATCAGCCTATATCGCACCACCTTTTGTCCCTCACGGCGCT 279
BSNT_05774___ 280 AGAAACGACACAGACCAAGAAGTGATTGCTATTGATATCAAGCGGCTGAA 329
...|||...|||||..||||||||||||||||||||||.||..|..|.||
BPUM_3421___b 280 TCTAACCTAACAGATGAAGAAGTGATTGCTATTGATATTAAAAGATTAAA 329
BSNT_05774___ 330 AGCT---GATGAAACATATACA-AG----TCCTGAGGAC-TACTTTTTGG 370
||.| ||.|| ||||| || |||| || ||.||.||.|
BPUM_3421___b 330 AGATGGCGAGGA-----ATACACAGCGCCTCCT----ACTTATTTCTTAG 370
BSNT_05774___ 371 ATATTTTCAAAACAAGAGACCTGCTGCCGGGCATGGAAGTCACGTTCTTT 420
|.||||||||||||.|.||..|.||.||.|||||||||||.||.||||||
BPUM_3421___b 371 ACATTTTCAAAACACGGGATTTACTCCCTGGCATGGAAGTGACCTTCTTT 420
BSNT_05774___ 421 GTTGAGGATTGGGTAGAAATTATGCTTGCCAAAATCCCTGGAAATGGCGG 470
||||||||||||.|.||..|.|||.|||||||.||.||||||||||||||
BPUM_3421___b 421 GTTGAGGATTGGATGGAGCTCATGATTGCCAACATTCCTGGAAATGGCGG 470
BSNT_05774___ 471 AGAAATGCCTTTCCATAAACATCGGAATGAACAAATAGGCATCTGCATCG 520
||||||||||||.||.|||||.||.|||||||||||.|||||.||||||.
BPUM_3421___b 471 AGAAATGCCTTTTCACAAACACCGCAATGAACAAATCGGCATTTGCATCA 520
BSNT_05774___ 521 GCGGCGGCTATGACATGACGGTCGAAGGCTGCACAGTCGAGATGAAATTC 570
||||.||.|||||.|||||..|.|||||||..||||...|.|||..|||.
BPUM_3421___b 521 GCGGAGGTTATGATATGACCATTGAAGGCTTTACAGAGAAAATGGCATTT 570
BSNT_05774___ 571 GGCACAGCCTATTTCTGTGAGCCTCGCGAAGATCATGGTGCCATCAA-CC 619
||.||..|||||||||||||.|||...||||||||.||.||.||.|| ||
BPUM_3421___b 571 GGTACTACCTATTTCTGTGACCCTAAGGAAGATCACGGGGCAATAAATCC 620
BSNT_05774___ 620 GTTCAGAAA-----AAGAATCAAAATCGATTAATATCTTCTTCCCGCCGC 664
||| |||..|||||.||.||||||.|||||||.||.||.|
BPUM_3421___b 621 ------AAAGCCGGAAGCCTCAAAGTCTATTAATCTCTTCTTTCCTCCCC 664
BSNT_05774___ 665 GCTATAACAGGGCAAAAGCAAAAAAAATGAAGGCGGATGAATGA 708
|||||||..||...|||.|||||.|...|||||.|.|..|||||
BPUM_3421___b 665 GCTATAATCGGTTGAAACCAAAAGAGTCGAAGGTGAAGAAATGA 708
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