Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05763 and BPUM_3415
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:20
# Commandline: needle
# -asequence dna-align/BSNT_05763___eutD.1.24716.seq
# -bsequence dna-align/BPUM_3415___eutD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05763___eutD-BPUM_3415___eutD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05763___eutD-BPUM_3415___eutD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05763___eutD
# 2: BPUM_3415___eutD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 980
# Identity: 782/980 (79.8%)
# Similarity: 782/980 (79.8%)
# Gaps: 16/980 ( 1.6%)
# Score: 3126.5
#
#
#=======================================
BSNT_05763___ 1 GTGGCAGATTTATTTTCAACAGTGCAAGAAAAAGTAGCTGGAAAAGACGT 50
|||||||||.|.|||||||||||.||.|||||.||.||.||.||||..||
BPUM_3415___e 1 GTGGCAGATATTTTTTCAACAGTTCAGGAAAAGGTTGCAGGTAAAGGAGT 50
BSNT_05763___ 51 TAAAATTGTATTTCCTGAAGGCTTAGACGAGCGTATTTTAGAAG-CGGTC 99
.||.||.||.||||||||.||..|.|||||.||.|||.||..|| ||.||
BPUM_3415___e 51 AAAGATCGTTTTTCCTGAGGGAATGGACGAACGCATTCTAACAGCCGTTC 100
BSNT_05763___ 100 AGCAAGCTTGCAGGAAACAAAGTGCTGAATCCGATTGTGATCGG------ 143
| .||.||.||||....||||||..||.|.||.|||||..|.||
BPUM_3415___e 101 A-AAAACTAGCAGATGGCAAAGTCTTGCAGCCAATTGTTGTAGGTAAAAC 149
BSNT_05763___ 144 -CAATGAAAATGAGATCCAAGCAAAAGCAAAAGAATTGAACCTTACGCTG 192
||| |||..|| |||||||||||||||||||....|||||.||.
BPUM_3415___e 150 TCAA-GAAGTTG------AAGCAAAAGCAAAAGAATTAGGTCTTACACTT 192
BSNT_05763___ 193 GACGGCGTTAAGATTTATGATCCTCATACATATGAAGGCATGGAAGACCT 242
||.||.|||.|..|.|||||||||||||||||||||||..|.|||||.||
BPUM_3415___e 193 GATGGTGTTGACGTGTATGATCCTCATACATATGAAGGTTTTGAAGAGCT 242
BSNT_05763___ 243 TGTACAAGCATTCGTAGAACGCCGCAAAGGCAAAGCGACAGAAGAACAGG 292
|||||||||.|||||.|||.|.||.|||||||||||.||||||||.||.|
BPUM_3415___e 243 TGTACAAGCTTTCGTCGAAAGACGTAAAGGCAAAGCAACAGAAGAGCAAG 292
BSNT_05763___ 293 CTCGCAAAGCGTTATTAGACGAGAACTACTTCGGTACAATGCTGGTGTAT 342
|..|.|||||.|||.||||.||.||||||||.|||||.|||||.|||||.
BPUM_3415___e 293 CAAGAAAAGCATTACTAGATGAAAACTACTTTGGTACGATGCTTGTGTAC 342
BSNT_05763___ 343 AAAGGACTTGCAGACGGACTTGTAAGCGGAGCTGCTCACTCAACTGCTGA 392
|||||.||||||.||||||||||.|||||.||.||.||.|||||||||||
BPUM_3415___e 343 AAAGGTCTTGCACACGGACTTGTGAGCGGTGCAGCACATTCAACTGCTGA 392
BSNT_05763___ 393 CACTGTCCGCCCGGCTCTTCAAATCATCAAAACAAAAGAAGGCGTGAAAA 442
|||.||.|||||.||.|||||||||||.|||||||||||||||||.||.|
BPUM_3415___e 393 CACAGTACGCCCAGCACTTCAAATCATTAAAACAAAAGAAGGCGTAAAGA 442
BSNT_05763___ 443 AGACTTCCGGCGTGTTCATCATGGCTCGCGGAGAAGAGCAATACGTATTC 492
|.|||||.|||||.||||||||||||||.||.|||||||||||.||.||.
BPUM_3415___e 443 AAACTTCTGGCGTCTTCATCATGGCTCGTGGCGAAGAGCAATATGTGTTT 492
BSNT_05763___ 493 GCAGATTGCGCGATCAACATTGCGCCTGACAGCCAAGATCTTGCCGAGAT 542
||.|||||.||.|||||||||||.||.||||||||||||||.||.||.||
BPUM_3415___e 493 GCTGATTGTGCAATCAACATTGCACCAGACAGCCAAGATCTAGCTGAAAT 542
BSNT_05763___ 543 TGCGATCGAAAGTGCCAATACGGCAAAAATGTTCGACATTGAGCCTCGCG 592
|||.|||||||||||.|||||.||.||||||||||||||.||.||.||.|
BPUM_3415___e 543 TGCCATCGAAAGTGCAAATACAGCCAAAATGTTCGACATCGAACCACGTG 592
BSNT_05763___ 593 TGGCAATGCTCAGCTTCTCTACAAAAGGCTCAGCAAAATCTGATGAAACA 642
|.||||||||.|||||||||||||||||||||||||||||.||.||||||
BPUM_3415___e 593 TAGCAATGCTTAGCTTCTCTACAAAAGGCTCAGCAAAATCAGACGAAACA 642
BSNT_05763___ 643 GAAAAAGTAGCGGATGCAGTGAAAATCGCGAAAGAAAAAGCGCCTGAACT 692
|||||||||.|.||.|||||..|.||.||.||||||||.||.|||||.||
BPUM_3415___e 643 GAAAAAGTATCTGAAGCAGTTCAGATTGCAAAAGAAAAGGCACCTGAGCT 692
BSNT_05763___ 693 GACACTTGACGGCGAATTCCAATTTGATGCTGCATTTGTTCCATCTGTAG 742
...||||||.||.|||||||||||.|||||.||.||.|||||.||.||||
BPUM_3415___e 693 TGTACTTGATGGAGAATTCCAATTCGATGCAGCTTTCGTTCCTTCAGTAG 742
BSNT_05763___ 743 CTGAGAAAAAAGCGCCGGATTCCGAAATCAAAGGGGACGCTAACGTATTC 792
|.|.|||||||||.||.|||||||..||.|||||.||.||||.||||||.
BPUM_3415___e 743 CAGCGAAAAAAGCACCAGATTCCGTTATTAAAGGCGATGCTAGCGTATTT 792
BSNT_05763___ 793 GTATTCCCAAGCCTTGAAGCAGGAAACATCGGCTATAAAATCGCTCAGCG 842
||.|||||.|||||.|||||.||||||||.|||||.|||||.||.|||||
BPUM_3415___e 793 GTTTTCCCTAGCCTAGAAGCTGGAAACATTGGCTACAAAATTGCACAGCG 842
BSNT_05763___ 843 TTTGGGCAACTTTGAAGCGGTAGGTCCAATCCTGCAAGGTTTAAATATGC 892
.||.||.|||||||||||.||||||||||||.|||||||.|||||...||
BPUM_3415___e 843 CTTAGGTAACTTTGAAGCTGTAGGTCCAATCTTGCAAGGCTTAAACCAGC 892
BSNT_05763___ 893 CTGTAAACGACCTTTCAAGAGGATGTAACGCTGAAGATGTTTACAATCTC 942
|.||||||||||||||||||||.|||||.||.|||||.||||||||.||.
BPUM_3415___e 893 CAGTAAACGACCTTTCAAGAGGCTGTAATGCCGAAGACGTTTACAACCTT 942
BSNT_05763___ 943 GCATTAATTACAGCGGCGCAAGCACTGTAA 972
||..|.||.|||||.||.||||||||.|||
BPUM_3415___e 943 GCGCTTATCACAGCAGCTCAAGCACTATAA 972
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