Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05741 and BPUM_3391
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_05741___ywhB.1.24716.seq
# -bsequence dna-align/BPUM_3391___ywhB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05741___ywhB-BPUM_3391___ywhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05741___ywhB-BPUM_3391___ywhB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05741___ywhB
# 2: BPUM_3391___ywhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 140/194 (72.2%)
# Similarity: 140/194 (72.2%)
# Gaps: 13/194 ( 6.7%)
# Score: 493.0
#
#
#=======================================
BSNT_05741___ 1 ATGCC-ATACGTAACTGTCAAAATGCTCGAAGGCCGTACAGACGAGCAAA 49
.|||| || .||.||.||..|||||||.|||||..|.|||||||||||||
BPUM_3391___y 1 TTGCCGAT-TGTCACCGTACAAATGCTTGAAGGAAGAACAGACGAGCAAA 49
BSNT_05741___ 50 AA----CGCAATCTTGTCGAGAAAGTAACAGAAGCCGTAAAGGAAACAAC 95
|| || |||||.||||||||.||.||.||.||....||||||||
BPUM_3391___y 50 AAAGAGCG----CTTGTGGAGAAAGTCACTGATGCTGTTGTTGAAACAAC 95
BSNT_05741___ 96 CGGTGCTTCTGAAGAAAAAATTGTTGTCTTTATAGAAGAAATGAGAAAAG 145
.||.||...||.|||||||.|...||||.||||.||||||||||.|||||
BPUM_3391___y 96 AGGCGCAGGTGCAGAAAAAGTCTCTGTCATTATTGAAGAAATGAAAAAAG 145
BSNT_05741___ 146 ACCATTATGCCGTCGCAGGCAAACGCCTGAGCGATATGGAATAA 189
|.||.||||||||.|||||.||||||.|.|||||..||.||
BPUM_3391___y 146 AACACTATGCCGTAGCAGGAAAACGCATCAGCGACCTGTAA--- 186
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