Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05733 and BPUM_3387
See
Amino acid alignment /
Visit
BSNT_05733 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_05733___speE.1.24716.seq
# -bsequence dna-align/BPUM_3387___speE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05733___speE-BPUM_3387___speE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05733___speE-BPUM_3387___speE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05733___speE
# 2: BPUM_3387___speE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 832
# Identity: 689/832 (82.8%)
# Similarity: 689/832 (82.8%)
# Gaps: 2/832 ( 0.2%)
# Score: 2861.0
#
#
#=======================================
BSNT_05733___ 1 TTGAGCGAACTTTGGTACACAGAGAAGCAGACGAAAAACTTTGGCATTAC 50
.||||||||||||||||.|||||||||||.|||||.||.|||||.|||||
BPUM_3387___s 1 ATGAGCGAACTTTGGTATACAGAGAAGCAAACGAAGAATTTTGGTATTAC 50
BSNT_05733___ 51 GATGAAGGTTAACAAGACGTTACATACAGAACAAACGGAGTTTCAGCATT 100
..|||||||.||||||||..|.||.|||||||||||.||.||||||||||
BPUM_3387___s 51 ATTGAAGGTGAACAAGACCCTTCACACAGAACAAACAGATTTTCAGCATT 100
BSNT_05733___ 101 TAGAAATGGTGGAAACAGAAGAGTTCGGCAACATGCTGTTTTTGGACGGC 150
|||||||||||||||||||||||||.|||||.|||||||||||.|||||.
BPUM_3387___s 101 TAGAAATGGTGGAAACAGAAGAGTTTGGCAATATGCTGTTTTTAGACGGT 150
BSNT_05733___ 151 ATGGTGATGACATCTGAAAAAGACGAATTCGTTTATCACGAAATGGTGGC 200
|||||||||||||||||.|||||.||.||.||.||.||||||||||||||
BPUM_3387___s 151 ATGGTGATGACATCTGAGAAAGATGAGTTTGTATACCACGAAATGGTGGC 200
BSNT_05733___ 201 GCATGTGCCATTATTTACGCACCCAAATCCGGAGCACGTTCTTGTAGTCG 250
.|||||.||..|.||.||.||.|||||.|||||..|.||||||||.||.|
BPUM_3387___s 201 ACATGTTCCTCTTTTCACTCATCCAAACCCGGAAAATGTTCTTGTTGTAG 250
BSNT_05733___ 251 GCGGCGGTGACGGCGGCGTTATCAGAGAAATCCTGAAGCACCCAAGCGTG 300
||||.||.||||||||.||.||..|.|||||.||.|||||||||||.|||
BPUM_3387___s 251 GCGGAGGAGACGGCGGTGTCATTCGTGAAATTCTCAAGCACCCAAGTGTG 300
BSNT_05733___ 301 AAAAAAGCGACACTTGTAGACATTGACGGCAAGGTGATCGAATACTCTAA 350
|||||||||||||||||.||.|||||.||.||.||.|||||||||||.||
BPUM_3387___s 301 AAAAAAGCGACACTTGTTGATATTGATGGAAAAGTCATCGAATACTCGAA 350
BSNT_05733___ 351 AAAGTTCCTTCCTTCTATCGCAGGCAAACTGGATGATCCGCGCGTTGACG 400
.||.|||||||||||.||.||.||.||.||.||.|||||.||.||.||.|
BPUM_3387___s 351 GAAATTCCTTCCTTCAATTGCTGGGAAGCTAGACGATCCTCGTGTAGATG 400
BSNT_05733___ 401 TGCAGGTAGATGACGGATTTATGCACATTGCAAAATCTGAAAATCAATAT 450
|..|.||.|..|||||.||||||||||||||..||.||||.|||.|.||.
BPUM_3387___s 401 TCAAAGTCGGAGACGGCTTTATGCACATTGCTGAAGCTGACAATGAGTAC 450
BSNT_05733___ 451 GACGTCATCATGGTAGATTCGACTGAACCAGTCGGACCGGCTGTAAACCT 500
||.|||||||||||.||.||.|||||||||||.|||||.|||||.|||||
BPUM_3387___s 451 GATGTCATCATGGTGGACTCAACTGAACCAGTTGGACCAGCTGTGAACCT 500
BSNT_05733___ 501 GTTTACAAAAGGATTCTACGCAGGAATCGCTAAAGCGCTGAAAGAAGACG 550
|||..|.||||||||.||||||||||||.|.|||||.||.||||||||||
BPUM_3387___s 501 GTTCTCTAAAGGATTTTACGCAGGAATCTCAAAAGCACTCAAAGAAGACG 550
BSNT_05733___ 551 GCATTTTTGTCGCACAGACGGACAACCCATGGTTTACACCGGAATTAATC 600
|.|||||.||.|||||.|||||||||||.|||||.|||||.||..|.||.
BPUM_3387___s 551 GTATTTTCGTGGCACAAACGGACAACCCTTGGTTCACACCTGAGCTGATT 600
BSNT_05733___ 601 ACAAATGTACAGCGCGACGTGAAGGAAATCTTCCCGATTACGAAGCTGTA 650
|||||||||||.||.||.|||||.|||||.|||||.||.||||||||.||
BPUM_3387___s 601 ACAAATGTACAACGTGATGTGAAAGAAATTTTCCCAATCACGAAGCTTTA 650
BSNT_05733___ 651 TACGGCGAACATTCCGACATATCCAAGCGGTTTGTGGACATTTACAATTG 700
|||.|||||.|||||.||.||||||||.||..|.|||||||||||.||||
BPUM_3387___s 651 TACAGCGAATATTCCAACGTATCCAAGTGGACTTTGGACATTTACCATTG 700
BSNT_05733___ 701 GCTCGAAAAAATATGATCCGCTTGCAGTGGAAGACAGCCGTTTCTTCGAT 750
|.||.|||||.|||||.||.|||||.||.|||||||||||||||||.|||
BPUM_3387___s 701 GTTCAAAAAAGTATGACCCACTTGCTGTAGAAGACAGCCGTTTCTTTGAT 750
BSNT_05733___ 751 ATTGAGACGAAATATTACACAAAAGATATT-CATAAAGCGGCGTTTGTTC 799
|||||||||||||||||||||||||| ||| ||.||||||||.||.||||
BPUM_3387___s 751 ATTGAGACGAAATATTACACAAAAGA-ATTGCACAAAGCGGCATTCGTTC 799
BSNT_05733___ 800 TGCCGAAATTTGTGAGTGACCTGATTAAATAA 831
||||||||||||||||.|||.|.||.||||||
BPUM_3387___s 800 TGCCGAAATTTGTGAGCGACTTAATCAAATAA 831
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.