Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05676 and BPUM_3360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_05676___pyrG.1.24716.seq
# -bsequence dna-align/BPUM_3360___pyrG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05676___pyrG-BPUM_3360___pyrG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05676___pyrG-BPUM_3360___pyrG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05676___pyrG
# 2: BPUM_3360___pyrG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1620
# Identity: 1269/1620 (78.3%)
# Similarity: 1269/1620 (78.3%)
# Gaps: 24/1620 ( 1.5%)
# Score: 4882.5
#
#
#=======================================
BSNT_05676___ 1 ATGACGAAATATATTTTTGTAACCGGGGGAGTTGTATCCTCACTTGGAAA 50
|||||.||.||||||||||||||.||.||||||||.||||||||||||||
BPUM_3360___p 1 ATGACAAAGTATATTTTTGTAACAGGAGGAGTTGTTTCCTCACTTGGAAA 50
BSNT_05676___ 51 GGGTATTGTAGCAGCTTCATTAGGGCGTTTGCTGAAAAACCGCGGACTGA 100
.||.||....||.||.||.|||||.||..|.||||||||..|.||..||.
BPUM_3360___p 51 AGGGATCACGGCTGCCTCGTTAGGCCGCCTTCTGAAAAATAGAGGGATGG 100
BSNT_05676___ 101 ACGTGACGATTCAAAAATTCGATCCATACATCAACGTTGACCCGGGAACA 150
|.||.||.||||||||||||||||||||.||||||||.|||||.||.||.
BPUM_3360___p 101 ATGTCACCATTCAAAAATTCGATCCATATATCAACGTAGACCCAGGGACG 150
BSNT_05676___ 151 ATGAGCCCGTACCAGCACGGTGAAGTATTCGTAACGGATGACGGCGCTGA 200
|||||.||.||.||.||||||||.||.|||||.||.||||||||.|||||
BPUM_3360___p 151 ATGAGTCCATATCAACACGGTGAGGTTTTCGTCACAGATGACGGTGCTGA 200
BSNT_05676___ 201 AACAGACTTGGACCTTGGTCACTATGAGCGTTTTATCGACATTAACCTGA 250
|||||||.|.|||.|.||||||||||||||.||.||.||.|||||..|.|
BPUM_3360___p 201 AACAGACCTTGACTTAGGTCACTATGAGCGCTTCATTGATATTAATTTAA 250
BSNT_05676___ 251 ATAAATTCAGCAACGTGACAACAGGTAAAATCTATTCAACAGTTCTTAAA 300
||||.|.|||||||||.|||||.||||||||.||.||.||.|||||.||.
BPUM_3360___p 251 ATAAGTACAGCAACGTCACAACTGGTAAAATATACTCTACTGTTCTGAAG 300
BSNT_05676___ 301 AAAGAACGCCGCGGAGATTACCTTGGAGGAACCGTACAGGTCATTCCGCA 350
|||||.||||||||.||.||..|.||.|||||.||||||||.|||||.||
BPUM_3360___p 301 AAAGAGCGCCGCGGCGACTATTTAGGCGGAACGGTACAGGTTATTCCCCA 350
BSNT_05676___ 351 CATCACAAACGAATTGAAAGACCGTGTTTACCGCGCAGGGAAAGAGACAA 400
.||.|||||.|||.|.||||||||.||.|||||.||.||.|||||.|||.
BPUM_3360___p 351 TATTACAAATGAAATCAAAGACCGCGTGTACCGTGCCGGAAAAGAAACAG 400
BSNT_05676___ 401 ACGCAGATGTTGTCATTACAGAAATCGGCGGTACTGTCGGAGACATCGAA 450
..||||||||.|||||.||||||||||||||.||.||.||||||||||||
BPUM_3360___p 401 GTGCAGATGTGGTCATCACAGAAATCGGCGGAACAGTTGGAGACATCGAA 450
BSNT_05676___ 451 TCACTGCCATTCCTTGAAGCGATCCGCCAAATGAAGAGCGACATCGGCCG 500
||.||.||.|||||.||||||||.||.|||||||||||.|||||.|||||
BPUM_3360___p 451 TCCCTTCCTTTCCTAGAAGCGATTCGACAAATGAAGAGTGACATTGGCCG 500
BSNT_05676___ 501 TGAAAACGTAATGTACATCCACTGTACGCTCGTACCTTACATTAAAGCTG 550
|||||||||.||||||||.||.|||||.||.||.||||||||...|||.|
BPUM_3360___p 501 TGAAAACGTCATGTACATTCATTGTACCCTTGTTCCTTACATCCGAGCAG 550
BSNT_05676___ 551 CTGGCGAATTAAAAACAAAACCGACACAGCACAGCGTAAAAGAATTGCGC 600
|.|||||..|.|||||||||||.||||||||.||.|||||||||.|.|||
BPUM_3360___p 551 CAGGCGAGCTGAAAACAAAACCAACACAGCATAGTGTAAAAGAACTTCGC 600
BSNT_05676___ 601 AG-CTTGGGCATTCAGCCAAACATCATCGTCGTTCGTACAGAAATGCCGA 649
|| |||||| ||||||||||||.|.||.||.||..|.||.||||||||.|
BPUM_3360___p 601 AGCCTTGGG-ATTCAGCCAAACGTGATTGTGGTCAGAACTGAAATGCCAA 649
BSNT_05676___ 650 TTTCTCAAGATATGAAAGATAAAATCGCGCTTTTCTGCGACATCGATACA 699
|..|.|||||.|||||.||.|||||.|||.|.|||||.||.||.||||||
BPUM_3360___p 650 TGACCCAAGACATGAAGGACAAAATTGCGTTATTCTGTGATATTGATACA 699
BSNT_05676___ 700 AAAGCGGTTATTGAATGTGAAGATGCGGACAACCTTTACTCCATTCCGCT 749
|||||.|||||.|||||..|||||||.||||..||.|||||.||||||||
BPUM_3360___p 700 AAAGCTGTTATCGAATGCCAAGATGCAGACACGCTATACTCTATTCCGCT 749
BSNT_05676___ 750 GGAGCTTCAAAAACAAGGGCTTGATAAGCTTGTTTGCGAGCACATGAAAT 799
.||..|.|||||||||||..|.||.||||||||.|||||.||.||||||.
BPUM_3360___p 750 TGATTTACAAAAACAAGGATTAGACAAGCTTGTATGCGAACATATGAAAC 799
BSNT_05676___ 800 TGGCATGCAAAGAAGCGGAAATGTCCGAGTGGAAAGAGCTTGTTAACAAA 849
|.|..|||.||||.||.||.|||.|.|||||||.||.|||.||..|.|||
BPUM_3360___p 800 TTGATTGCCAAGATGCAGACATGACGGAGTGGACAGCGCTAGTCGATAAA 849
BSNT_05676___ 850 GTCAGC--AACCTGTCTCAAACGA--TTACAATCGGCCTTGTCGGCAAAT 895
|| || |||| |||||||..| |.|||||.||.||.||.||.||||
BPUM_3360___p 850 GT--GCAAAACC--TCTCAAAACAAGTCACAATTGGTCTAGTAGGGAAAT 895
BSNT_05676___ 896 ACGTTGAGCTTCCTGACGCATACATTTCTGTTGTCGAGTCTCTCCGCCAT 945
|.|||||.||.|..||.|||||||||||||||||.||.||.||.||.|||
BPUM_3360___p 896 ATGTTGAACTGCAAGATGCATACATTTCTGTTGTTGAATCACTTCGACAT 945
BSNT_05676___ 946 GCGGGCTATGCGTTTGACACAGATGTAAAAGTGAAGTGGATCAACGCGGA 995
||.||.|||||.|||||..||||.||..||.|.||.||||||||.||.||
BPUM_3360___p 946 GCTGGTTATGCATTTGATGCAGACGTTCAAATCAAATGGATCAATGCTGA 995
BSNT_05676___ 996 AGAAGTGACAGAAAACAATATCGCAGA--ACTCACAAGCGGAACAGACGG 1043
|||||||||||.|.|.|||||.||.|| .|.||||||..| .||||||
BPUM_3360___p 996 AGAAGTGACAGCAGAAAATATGGCTGATTTCGCACAAGATG--TAGACGG 1043
BSNT_05676___ 1044 CATCATTGTGCCGGGCGGATTCGGAGACCGCGGTGTTGAAGGCAAAATCG 1093
||||||.||.||.||.||.||||||||||||||.||.|||||.||||||.
BPUM_3360___p 1044 CATCATCGTTCCTGGAGGCTTCGGAGACCGCGGAGTGGAAGGGAAAATCA 1093
BSNT_05676___ 1094 TCGCGACAAAATACGCGCGCGAAAACAACATTCCGTTCTTGGGTATTTGC 1143
|.||.|||.||||.||.||.||||||||..|.||.|||||.||.||||||
BPUM_3360___p 1094 TTGCTACACAATATGCTCGTGAAAACAAAGTGCCTTTCTTCGGAATTTGC 1143
BSNT_05676___ 1144 TTGGGCATGCAGGTGGCGTCTATTGAATACGCACGAAACGTATTGGGCTT 1193
||.||.|||||.||.|||||.||||||||.||||||||||||.|.|||.|
BPUM_3360___p 1144 TTAGGAATGCAAGTTGCGTCGATTGAATATGCACGAAACGTACTAGGCCT 1193
BSNT_05676___ 1194 AAAAGGCGCTCACTCAGCGGAAATTGATCCGTCAACTCAATACCCGATCA 1243
..||||.|||||.|||||||||||||||||...|||...||.|||.||||
BPUM_3360___p 1194 TGAAGGAGCTCATTCAGCGGAAATTGATCCTGAAACAGCATTCCCAATCA 1243
BSNT_05676___ 1244 TTGATCTTCTTCCTGAACAAAAGGATGTGGAGGATCTCGGGGGAACGCTT 1293
||||.||||||||.|||||.||||||||.||.|||||.||.|||||.|||
BPUM_3360___p 1244 TTGACCTTCTTCCAGAACAGAAGGATGTAGATGATCTAGGCGGAACACTT 1293
BSNT_05676___ 1294 CGTCTCGGCCTTTACCCTTGTAAGCTTGAA-GAAGGCACGAAAGCCTTTG 1342
|||||.||.||.||.||.||||| .||.|| ||||.|.|.|||||.||||
BPUM_3360___p 1294 CGTCTTGGTCTATATCCATGTAA-ATTAAATGAAGACTCCAAAGCATTTG 1342
BSNT_05676___ 1343 AAGTGTATCAGGATGAAGTGGTGTACGAGCGCCACCGCCACCGCTATGAG 1392
.||..||..|.|||||||||||.|||||.|||||||||||.|||||||||
BPUM_3360___p 1343 CAGCATACAACGATGAAGTGGTCTACGAACGCCACCGCCATCGCTATGAG 1392
BSNT_05676___ 1393 TTTAACAATGAATTCAGACAGCAAATGGAAG-AGCAAGGCTTCGTATTCT 1441
||.||.||.|||||||||||||||||||||| .|| |||.||.||.||||
BPUM_3360___p 1393 TTCAATAACGAATTCAGACAGCAAATGGAAGCTGC-AGGATTTGTCTTCT 1441
BSNT_05676___ 1442 CAGGCACAAGCCCTGATGGACGCCTTGTTGAAATCATCGAGCTGAAAGAC 1491
|.||.||||||||.||.|||||.|||||||||||.|||||||||||.||.
BPUM_3360___p 1442 CTGGTACAAGCCCAGACGGACGTCTTGTTGAAATTATCGAGCTGAAGGAT 1491
BSNT_05676___ 1492 CATCCTTGGTTCGTGGCTTCTCAGTTCCATCCAGAGTTCAAGTCAAGACC 1541
||.|||||||||.|.||||||||.|||||.|||||.|||...||||||||
BPUM_3360___p 1492 CACCCTTGGTTCCTTGCTTCTCAATTCCACCCAGAATTCGTCTCAAGACC 1541
BSNT_05676___ 1542 GACAAGACCTCAGCCTCTATTCAAAGGCTTTATCGGAGCGTCTGTCGAAG 1591
|||||||||||||||..||||.|.||..||..|.||.||.||..|..|||
BPUM_3360___p 1542 GACAAGACCTCAGCCATTATTTAGAGATTTCGTTGGTGCTTCACTGCAAG 1591
BSNT_05676___ 1592 ---CTGCAAATCAGAAGTAA 1608
||| ||||| ||.|||
BPUM_3360___p 1592 CATCTG--AATCA-AAATAA 1608
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