Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_05664 and BPUM_3353

See Amino acid alignment / Visit BSNT_05664 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:15
# Commandline: needle
#    -asequence dna-align/BSNT_05664___glpX.1.24716.seq
#    -bsequence dna-align/BPUM_3353___glpX.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05664___glpX-BPUM_3353___glpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05664___glpX-BPUM_3353___glpX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05664___glpX
# 2: BPUM_3353___glpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 968
# Identity:     764/968 (78.9%)
# Similarity:   764/968 (78.9%)
# Gaps:           4/968 ( 0.4%)
# Score: 2980.0
# 
#
#=======================================

BSNT_05664___      1 ATGGAAAGAAGTTTATCAATGGAATTGGTACGTGTGACCGAAGCTGCGGC     50
                     |||||||||||||||||.||||||.|.|||||.|||||.|||||.||.||
BPUM_3353___g      1 ATGGAAAGAAGTTTATCGATGGAACTAGTACGGGTGACAGAAGCAGCTGC     50

BSNT_05664___     51 ATTGGCATCAGCAAGATGGATGGGCCGGGGAAAAAAAGATGAGGCTGATG    100
                     |||...|||.||..|.||||||||..|.|||..||||||.||.||.||||
BPUM_3353___g     51 ATTAAAATCTGCTCGTTGGATGGGAAGAGGATTAAAAGACGAAGCAGATG    100

BSNT_05664___    101 AAGCGGCAACAAGTGCAATGAGAGACGTTTTTGATACAGTGCCGATGAAA    150
                     |.||.|||||||||||||||.|.||.||.||||||||..|.|||||||||
BPUM_3353___g    101 ATGCTGCAACAAGTGCAATGCGTGATGTATTTGATACCATTCCGATGAAA    150

BSNT_05664___    151 GGGACCGTTGTAATCGGTGAAGGGGAAATGGACGAAGCGCCGATGCTGTA    200
                     ||.||.||.||.||.||.||.|||||||||||||||||.||.|||||.||
BPUM_3353___g    151 GGAACAGTGGTCATTGGCGAGGGGGAAATGGACGAAGCACCAATGCTTTA    200

BSNT_05664___    201 TATCGGGGAAAAACTCGGAAACGGGTACGGCCCTCGCGTTGATGTCGCAG    250
                     |||.||||||||.||.||.|||||.|||||.|||||.||.|||||.||.|
BPUM_3353___g    201 TATTGGGGAAAAGCTTGGGAACGGATACGGACCTCGTGTGGATGTAGCTG    250

BSNT_05664___    251 TTGACCCTCTTGAAGGCACAAACATCTTAGCAAGCGGCGGCTGGAACGCG    300
                     ||||.|||.|.|||||.|||||.||..|.|||||||||||||||||.|| 
BPUM_3353___g    251 TTGATCCTTTAGAAGGAACAAATATTGTGGCAAGCGGCGGCTGGAATGC-    299

BSNT_05664___    301 CTGA-CGGTGATCGCTGTCGCAGACCACGGC-ACTCTGCTGAATGCTCCT    348
                     ||.| |.||.||.||.||.|||||.||.||| ||| ||||||||||.|||
BPUM_3353___g    300 CTTAGCTGTTATTGCGGTGGCAGATCATGGCAACT-TGCTGAATGCACCT    348

BSNT_05664___    349 GACATGTATATGCAAAAAATCGCAGTCGGTCCGGAAGCGGTGGGCTGCAT    398
                     ||.|||||.|||.|.||.||||||||.|||||.||||||||.||||||||
BPUM_3353___g    349 GATATGTACATGGATAAGATCGCAGTAGGTCCAGAAGCGGTAGGCTGCAT    398

BSNT_05664___    399 TGACATCGAAGCACCTGTCATTGACAACCTTAAAGCGGTGGCAAAAGCGA    448
                     .|||||.|||||.||||||||||||||.|||...||.||.||||||||.|
BPUM_3353___g    399 CGACATTGAAGCGCCTGTCATTGACAATCTTCGTGCTGTAGCAAAAGCAA    448

BSNT_05664___    449 AAAACAAGGACGTTGAGGACGTCGTTGCCACAATTTTAAACCGTGAAAGA    498
                     |||||||.||..||||.||.||.|||||.||.|||||||||.|.||..||
BPUM_3353___g    449 AAAACAAAGATATTGAAGATGTGGTTGCAACGATTTTAAACAGAGATCGA    498

BSNT_05664___    499 CACGAAAAAATCATTTCCGAGCTTCGTGAGGCCGGCGCCAGAATCAAATT    548
                     ||.||.|||||||||.|.||.||..|.||.||.||.||.|||||||||.|
BPUM_3353___g    499 CATGAGAAAATCATTGCTGAACTGAGAGAAGCAGGAGCAAGAATCAAACT    548

BSNT_05664___    549 GATCAATGACGGCGATGTCGCAGGCGCCATCAACACGGCTTTCGACCACA    598
                     ||||.||||.||.||.||.|||||.|||||.||.||.||.||.||.||.|
BPUM_3353___g    549 GATCGATGATGGTGACGTTGCAGGAGCCATTAATACAGCATTTGATCATA    598

BSNT_05664___    599 CGGGCGTTGATATCCTGTTCGGATCAGGCGGCGCTCCCGAGGGTGTGCTT    648
                     |.||.||||||||.||.||.||.||||||||.||.||.||.|||||.|||
BPUM_3353___g    599 CAGGTGTTGATATTCTATTTGGTTCAGGCGGAGCGCCAGAAGGTGTCCTT    648

BSNT_05664___    649 TCCGCTGTTGCGCTAAAAGCACTCGGAGGAGAAATCATTGGTAAACTTCT    698
                     ||.|||||||||.||||.|||||.||.||.||||||...||.||.|||||
BPUM_3353___g    649 TCTGCTGTTGCGTTAAAGGCACTTGGTGGTGAAATCCACGGAAAGCTTCT    698

BSNT_05664___    699 TCCGCAAAGCGAAGAAGAAATCACTCGCTGTCACAAAATGGGCCTTGATT    748
                     |||.|||||.|||||||||.|||..||||||.|.||||||||.||.|||.
BPUM_3353___g    699 TCCTCAAAGTGAAGAAGAACTCAGACGCTGTGAGAAAATGGGGCTGGATG    748

BSNT_05664___    749 TAAGCAAAGTCCTTCGCATGGAAGACCTTGTGAAGGGTGATGACGCGATT    798
                     |..||||||||.|..|.|||||||||||.|||||.||.||.|||||.|||
BPUM_3353___g    749 TTGGCAAAGTCTTAAGAATGGAAGACCTCGTGAAAGGCGACGACGCCATT    798

BSNT_05664___    799 TTTGCAGCTACAGGGGTTACTGACGGCGAGCTGTTAAAAGGAGTTCAATT    848
                     |||||.||.||.||.||.||.|||||.|||||.||||||||.||||||||
BPUM_3353___g    799 TTTGCTGCGACTGGTGTAACAGACGGTGAGCTATTAAAAGGTGTTCAATT    848

BSNT_05664___    849 CAAAGGCTCTGTCGGTACAACTGAAAGCTTAGTTATCCGCGCAAAATCGG    898
                     ||||||||||||.||.|||||..|.||..|.||.||.||.||.|||||.|
BPUM_3353___g    849 CAAAGGCTCTGTTGGAACAACACATAGTGTTGTGATGCGTGCGAAATCAG    898

BSNT_05664___    899 GCACTGTTCGTTTCGTTGATGGCAGACACAGCTTGAAAAAGAAACCAAAT    948
                     |.||.|||||||||||.|||||||||||||||||.||.||.|||||.|||
BPUM_3353___g    899 GTACAGTTCGTTTCGTAGATGGCAGACACAGCTTAAAGAAAAAACCGAAT    948

BSNT_05664___    949 CTTGTAATCCGTCCATAA    966
                     |||||.||.|||||.|||
BPUM_3353___g    949 CTTGTCATTCGTCCGTAA    966


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05664 and BPUM_3353

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
