Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05639 and BPUM_3337
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence dna-align/BSNT_05639___rpiB.1.24716.seq
# -bsequence dna-align/BPUM_3337___ywlF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05639___rpiB-BPUM_3337___ywlF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05639___rpiB-BPUM_3337___ywlF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05639___rpiB
# 2: BPUM_3337___ywlF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 459
# Identity: 353/459 (76.9%)
# Similarity: 353/459 (76.9%)
# Gaps: 18/459 ( 3.9%)
# Score: 1347.0
#
#
#=======================================
BSNT_05639___ 1 ATGAAAGTAGCCATTGCATCGGATCATGGCGG--CGTTCACATTCGAAAT 48
|||||||||||.||||||||.|||||.||||| || .|.|||||..|.
BPUM_3337___y 1 ATGAAAGTAGCTATTGCATCCGATCACGGCGGAACG--AATATTCGTGAA 48
BSNT_05639___ 49 GAAATCAAAGAGTTAATGGACGAATTGCAAATTGAATATATTGATATGGG 98
|||||||||.|..|.|||||.||||||.|.||||||||.|||||||||||
BPUM_3337___y 49 GAAATCAAACAACTGATGGATGAATTGAAGATTGAATACATTGATATGGG 98
BSNT_05639___ 99 CTGTGACTGCGG--CAGCGGCTCTGTCGATTATCCGGATTATGCTTTTCC 146
.|||||.||.|| || ||.|||||.||.||.||.||||||||||||||
BPUM_3337___y 99 TTGTGAATGTGGATCA--GGTTCTGTAGACTACCCAGATTATGCTTTTCC 146
BSNT_05639___ 147 GGTGGCCGAAAAAGTGGTTAGCGGCGAAGTTGACAGAGGCATTTTAATTT 196
.||.|||.|.|..|||||.|.|||.|||||.|||.|.|||||||||||||
BPUM_3337___y 147 TGTAGCCAACATGGTGGTAAACGGAGAAGTGGACCGCGGCATTTTAATTT 196
BSNT_05639___ 197 GCGGGACAGGCATCGGCATGAGCATTTCCGCTAATAAAGTAAAAGGGATT 246
||||||||||||||||.|||||.||.||.||.||.|||||||||||.|||
BPUM_3337___y 197 GCGGGACAGGCATCGGTATGAGTATCTCAGCAAACAAAGTAAAAGGAATT 246
BSNT_05639___ 247 CGCTGCGCGCTGGCGCACGATACCTTCAGCGCGAAGGCGACGAGGGAGCA 296
|||||.|||||||||||.|||||.||.||.|||||.|||||.||.||.||
BPUM_3337___y 247 CGCTGTGCGCTGGCGCATGATACATTTAGTGCGAAAGCGACTAGAGAACA 296
BSNT_05639___ 297 TAATGACACAAACATCCTTGCGATGGGTGAACGGGTGATCGGACCTGGTT 346
|||||||||||||.|||||||.|||||.|||||.||.||.||||||||.|
BPUM_3337___y 297 TAATGACACAAACGTCCTTGCAATGGGAGAACGAGTCATTGGACCTGGAT 346
BSNT_05639___ 347 TGGCTCGGGAAATCGCAAAAACCTGGCTGACTACTGAGTTTACCGGGGGA 396
|.||.||.|||||.||..|.|..||||||||.||.||||||||.|..|||
BPUM_3337___y 347 TAGCACGTGAAATTGCGCATATTTGGCTGACAACAGAGTTTACTGCAGGA 396
BSNT_05639___ 397 AGACACCAAACG-----CGTATTGGAAAAATCTCCGATTATGAAGAGAAA 441
.|.| |.| ||.|||||.||.|||.|.||.||.|||||.||.
BPUM_3337___y 397 CGTC-----ATGCTGTACGGATTGGTAAGATCGCTGAGTACGAAGAAAAG 441
BSNT_05639___ 442 AACCTGTAG 450
.||||.||.
BPUM_3337___y 442 CACCTATAA 450
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