Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05616 and BPUM_3321
See
Amino acid alignment /
Visit
BSNT_05616 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_05616___murAA.1.24716.seq
# -bsequence dna-align/BPUM_3321___murAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05616___murAA-BPUM_3321___murAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05616___murAA-BPUM_3321___murAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05616___murAA
# 2: BPUM_3321___murAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1324
# Identity: 1053/1324 (79.5%)
# Similarity: 1053/1324 (79.5%)
# Gaps: 29/1324 ( 2.2%)
# Score: 4216.0
#
#
#=======================================
BSNT_05616___ 1 TTGGAAAAAATCATCGTCCGCGGCGGTCAGAAGTTAAACGGCACAGTCAA 50
|||||||||||||||||||||||||||||.|||||||||||||||||.||
BPUM_3321___m 1 TTGGAAAAAATCATCGTCCGCGGCGGTCAAAAGTTAAACGGCACAGTTAA 50
BSNT_05616___ 51 AGTTGAAGGCGCTAAAAATGCCGTTTTACCTGTTATCGCTGCATCTTTAT 100
|||.|||||.||.|||||||||||||||||.|||||||||||||||||.|
BPUM_3321___m 51 AGTAGAAGGAGCAAAAAATGCCGTTTTACCAGTTATCGCTGCATCTTTGT 100
BSNT_05616___ 101 TAGCAAGTGAAGAAAAAAGCGTAATTTGTGATGTACCTACGCTCTCCGAT 150
||||||||..||||||||||||||||||||||||||||||||||||||||
BPUM_3321___m 101 TAGCAAGTACAGAAAAAAGCGTAATTTGTGATGTACCTACGCTCTCCGAT 150
BSNT_05616___ 151 GTATATACAATTAACGAAGTGTTGCGTCATTTAGGAGCAGATGTGCATTT 200
|||||||||||.||.||||||||.|||||||||||||||||.||.|||||
BPUM_3321___m 151 GTATATACAATCAATGAAGTGTTACGTCATTTAGGAGCAGAAGTACATTT 200
BSNT_05616___ 201 TGAAAATAATGAAGTGACTGTAAATGCTTCATACGCTTTGCAAACTGAAG 250
|||||||||.|||||..|.||..||||.||..|.||..|..|||||||.|
BPUM_3321___m 201 TGAAAATAACGAAGTATCAGTGGATGCATCTCATGCACTAGAAACTGAGG 250
BSNT_05616___ 251 CACCTTTTGAATATGTTCGTAAAATGCGTGCGTCTGTGCTTGTCATGGGG 300
|.||.|||||.|||||.|||||||||||.|||||.|||||.||||||||.
BPUM_3321___m 251 CTCCGTTTGAGTATGTCCGTAAAATGCGAGCGTCAGTGCTCGTCATGGGA 300
BSNT_05616___ 301 CCGCTTCTTGCGCGTACAGGTCATGCAAGAGTTGCACTTCCGGGCGGATG 350
||.|||.|.||..|.|||||||||||||||||||||.|.||.||.||.||
BPUM_3321___m 301 CCACTTTTAGCAAGAACAGGTCATGCAAGAGTTGCATTACCTGGAGGCTG 350
BSNT_05616___ 351 CGCAATTGGTTCCAGACCGATTGATCAGCATTTAAAAGGTTTTGAAGCAA 400
.||.||||||||.|||||.|||||.||||||||||||||.||||||||||
BPUM_3321___m 351 TGCGATTGGTTCTAGACCAATTGACCAGCATTTAAAAGGCTTTGAAGCAA 400
BSNT_05616___ 401 TGGGCGCAGAAATCAAAGTCGGTAATGGCTTCATTGAAGCTGAAGTAAAA 450
||||.||..||||..||||.||.|||||.|||||.||.||||||||.|||
BPUM_3321___m 401 TGGGAGCTAAAATTCAAGTAGGAAATGGTTTCATCGAGGCTGAAGTCAAA 450
BSNT_05616___ 451 GGCCGACTGCAAGGCGCAAAAATTTATCTGGACTTCCCAAGTGTAGGAGC 500
|||||..|.|||||.||.|||||.|||.||||.|||||||||||.||.||
BPUM_3321___m 451 GGCCGTTTACAAGGTGCGAAAATCTATTTGGATTTCCCAAGTGTCGGCGC 500
BSNT_05616___ 501 TACAGAGAACCTGATTATGGCAGCCGCTCTAGCTGAAGGAACAACTACGC 550
.||.||.|||.|.|||||||||||.||..||||||||||.|||||.|...
BPUM_3321___m 501 AACTGAAAACATCATTATGGCAGCAGCATTAGCTGAAGGCACAACGATTT 550
BSNT_05616___ 551 TGGAAAACGTGGCAAAAGAACCCGAAATCGTTGATTTAGCAAACTATATC 600
|.||||||||.|||||||||||.|||||.||||||||.||||||||.|||
BPUM_3321___m 551 TAGAAAACGTAGCAAAAGAACCTGAAATTGTTGATTTGGCAAACTACATC 600
BSNT_05616___ 601 AACGGCATGGGCGGAAAAATCCGCGGAGCTGGCACCGGCACCATCAAAAT 650
||.|.|||||||||.|||.|.|||||||||||.||.||.||.||||||||
BPUM_3321___m 601 AATGCCATGGGCGGTAAAGTTCGCGGAGCTGGTACTGGTACAATCAAAAT 650
BSNT_05616___ 651 TGAAGGAGTCGAAAAGCTTCACGGCGTAAAACACCATATTATTCCTGACC 700
||||||.||.||||..||||||||.|.|||||||.|.||.||.||||||.
BPUM_3321___m 651 TGAAGGTGTGGAAACACTTCACGGTGCAAAACACAACATCATCCCTGACA 700
BSNT_05616___ 701 GCATTGAAGCGGGCACATTTATGGTTGCTGCTGCAATCACTGAAGGAAAC 750
|.||||||||.||.||.||.|||||.||.||.||.||.||.||||||||.
BPUM_3321___m 701 GAATTGAAGCAGGTACTTTCATGGTGGCAGCAGCCATTACAGAAGGAAAT 750
BSNT_05616___ 751 GTATTAGTAAAAGGAGCCGTTCCTGAACACCTCACCTCTTTAATTGCAAA 800
||..|.||.|||||.||.||.|||||.|||.|.||.||..|..|.|||||
BPUM_3321___m 751 GTTCTTGTGAAAGGCGCAGTGCCTGAGCACATGACATCACTTGTAGCAAA 800
BSNT_05616___ 801 AATGGAAGAGATGGGTGTAACAATTAAG------GATGAAGGTGAAGGTC 844
|||||||||.|||||| |||.|| ||.||||..||||||.
BPUM_3321___m 801 AATGGAAGAAATGGGT------ATTCAGATCATTGAAGAAGAAGAAGGTT 844
BSNT_05616___ 845 TGCGTGTCATCGGCCCGAA----AGAACTTAAACCGATTGACATCAAAAC 890
|..|.|||||.||.|| | || |||||.||.||.||..|.|||||
BPUM_3321___m 845 TAAGAGTCATTGGACC--ATCTCAG--CTTAAGCCAATCGATCTAAAAAC 890
BSNT_05616___ 891 AATGCCTCACCCGGGCTTCCCGACTGATATGCAGTCACAAATGATGGCGC 940
||||||.||.||.||.|||||.||.||||||||.||.||.||||||||||
BPUM_3321___m 891 AATGCCACATCCTGGTTTCCCAACGGATATGCAATCTCAGATGATGGCGC 940
BSNT_05616___ 941 TTCTGCTTCGTGCAAGCGGCACAAGCATGATTACAGAAACCGTTTTTGAA 990
|..||||||||||.|.|||.||||||||||||||||||||.||.||||||
BPUM_3321___m 941 TATTGCTTCGTGCGAACGGAACAAGCATGATTACAGAAACGGTATTTGAA 990
BSNT_05616___ 991 AACCGTTTTATGCATGCGGAAGAATTCCGCCGTATGAATGGTGATATCAA 1040
|||||.|||||||||||.|||||||||||||||||||||||.|||||.||
BPUM_3321___m 991 AACCGCTTTATGCATGCAGAAGAATTCCGCCGTATGAATGGCGATATTAA 1040
BSNT_05616___ 1041 GATTGAAGGACGTTCTGTCATCATTAACGGTCCTGTACAGCTTCAGGGAG 1090
.|||||.||.||.||||||||.||.|||||.||.||.||.|||||.||.|
BPUM_3321___m 1041 AATTGAGGGGCGCTCTGTCATTATCAACGGGCCGGTTCAACTTCAAGGTG 1090
BSNT_05616___ 1091 CTGAAGTTGCAGCGACTGATTTGCGTGCAGGTGCAGCGCTGATTCTTGCG 1140
|||||||.||||||||||||||..|.|||||.|||||.||..|.|||||.
BPUM_3321___m 1091 CTGAAGTGGCAGCGACTGATTTAAGAGCAGGAGCAGCACTTGTACTTGCT 1140
BSNT_05616___ 1141 GGGTTAGTGGCTGAAGGTCACACACGTGTTACTGAATTGAAGCACTTAGA 1190
||.|||||.||.||||||||.||||||||.|||||.||||||||..|.||
BPUM_3321___m 1141 GGATTAGTAGCAGAAGGTCATACACGTGTCACTGAGTTGAAGCATATCGA 1190
BSNT_05616___ 1191 CCGCGGTTACGTTGATTTCCATCAGAAGCTTGCCGCTCTGGGCGCAGACA 1240
.||.|||||.||..|.|||||.|||||||||||.||..|.||.||.||.|
BPUM_3321___m 1191 TCGTGGTTATGTGAACTTCCACCAGAAGCTTGCAGCAATCGGTGCCGATA 1240
BSNT_05616___ 1241 TCGAACGTGTAAATGATGAGTCTGCTTCTGAG---CAAGAGAATAAAGAA 1287
|.|||.|.|||||.|||||..|.||...||.| |||| ||.||
BPUM_3321___m 1241 TTGAAAGAGTAAACGATGAAACAGCAGATGTGACACAAG------AACAA 1284
BSNT_05616___ 1288 GTCGTTTCTGACTTAAATGCATAA 1311
||.||.||.||..|||||||.|||
BPUM_3321___m 1285 GTTGTATCAGATCTAAATGCGTAA 1308
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.