Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05603 and BPUM_3314
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_05603___moaA.1.24716.seq
# -bsequence dna-align/BPUM_3314___moaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05603___moaA-BPUM_3314___moaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05603___moaA-BPUM_3314___moaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05603___moaA
# 2: BPUM_3314___moaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1058
# Identity: 707/1058 (66.8%)
# Similarity: 707/1058 (66.8%)
# Gaps: 82/1058 ( 7.8%)
# Score: 2114.0
#
#
#=======================================
BSNT_05603___ 1 ATGATTACAGAGTCGCGTCAG-ATGTTGGATAAAAGAAACAGACCGCTGA 49
||| |.||| ||.||||||||.|||.|..||||..||.
BPUM_3314___m 1 ATG-------------GACAGTATATTGGATAAGAGACATCGACCATTGC 37
BSNT_05603___ 50 GAGACCTTCGCATTTCTGTTACAGACCGCTGCAACTTCCGATGCACGTAC 99
|.||..|..|.||.||.||.|||||.|||||.||||||.||||.||||||
BPUM_3314___m 38 GCGATTTAAGAATATCAGTAACAGATCGCTGTAACTTCAGATGTACGTAC 87
BSNT_05603___ 100 TGTATGCCCGCCGAATTATTCGGCCCGGATTATCCTTTTTTAAAGAAAGA 149
||||||||.||.|||.|.||.||.||.||||||||||||||.||.|||||
BPUM_3314___m 88 TGTATGCCTGCTGAAATTTTTGGACCAGATTATCCTTTTTTGAATAAAGA 137
BSNT_05603___ 150 GGAGCTGCTTTCATTTGAGGAGCTGGAACGGCTTGCGACATTGTTTGTCA 199
.|||||||||...||.||.||..|.||||.||||||.||..|.|||| ||
BPUM_3314___m 138 AGAGCTGCTTAGTTTCGAAGAAATTGAACAGCTTGCTACCCTTTTTG-CA 186
BSNT_05603___ 200 CAAGA-TTTGGCGTTGAAAAAATCCGCCTGACCGGCGGAGAGCCCCTCAT 248
.|.|| .|.||.||.|..|||||.|||.|.||.||.||.||.|||.|..|
BPUM_3314___m 187 AAGGACCTAGGTGTGGTCAAAATACGCATCACAGGTGGCGAACCCTTATT 236
BSNT_05603___ 249 GAGAAAGGATATGCCGGAGTTAATCAAAAAACTGGCCCGCATACCGGGTA 298
|.||||.|||.||||....|||||..||||.||..|...|||.||.|| |
BPUM_3314___m 237 GCGAAAAGATTTGCCTATCTTAATAGAAAAGCTCTCAAACATTCCAGG-A 285
BSNT_05603___ 299 TTCG-TGACATCGCGATGACGACAAACGGATCACTGCTGCCTGTTTATGC 347
.||| .|||||.||.|||||.|||||.|||.||||..|.|||||.|||||
BPUM_3314___m 286 ATCGAAGACATTGCTATGACAACAAATGGAACACTTTTACCTGTATATGC 335
BSNT_05603___ 348 AAAGAGGCTCAAGGAGGCTGGGCTGAAAAGGGTTACGATAAGCCTTGATT 397
..|.|.|.|.|||.|.||.||.||..||||.||.||.||.||..|.||||
BPUM_3314___m 336 TGATAAGTTAAAGAAAGCAGGTCTTCAAAGAGTCACCATTAGTTTGGATT 385
BSNT_05603___ 398 CTTTAGAAGAC-GAGCGTTTTAAGAAGATAAACGGGCGCGGTGTTTCTGT 446
|.||| ||..| ||.|||||||||.|.||.|||||..|...|.|||||.|
BPUM_3314___m 386 CATTA-AATCCTGACCGTTTTAAGCAAATGAACGGAAGGAATATTTCTAT 434
BSNT_05603___ 447 CAGCAAGGTGCTGGAAGGCATTGAAGCGGCGAAGCAAGCAGGGCTCGGTG 496
|...||.|||.|.||.||.|||||.||.||.||..|||||||.||.|.|.
BPUM_3314___m 435 CCAAAAAGTGTTTGATGGGATTGAGGCTGCAAAAAAAGCAGGACTTGCTA 484
BSNT_05603___ 497 TTAAAATCAATATGGTCGTTCAAAAGGGCGTCAATGAAAAAGATATACTG 546
||||.|||||||||||.||||||||.||.||.|||||..|.|||.|..||
BPUM_3314___m 485 TTAAGATCAATATGGTTGTTCAAAAAGGTGTGAATGATCAGGATGTTTTG 534
BSNT_05603___ 547 CCTATGGCCCGTTATTTTAAAGAAAAAGGGCATATCCTGAGATTCATTGA 596
||.|||||...|||.||||||.||..|||.|||.|.||.|||||.|||||
BPUM_3314___m 535 CCAATGGCAGCTTACTTTAAAAAAGCAGGACATGTTCTCAGATTTATTGA 584
BSNT_05603___ 597 ATTTATGGACGTAGGCAACACCAACCAATGGGAAAAGAAAG-ACGTCATG 645
.||||||||.||.||.||.||.|||.||| ||||...|.|| |.||||||
BPUM_3314___m 585 GTTTATGGATGTCGGAAATACGAACAAAT-GGAATCTAGAGCATGTCATG 633
BSNT_05603___ 646 ACAAAGGCGGAAATCATAG----ATTTGA-TCAATGAACACATGCCGGTT 690
|||||....||||||||.| |.|||| ||| |||| ||
BPUM_3314___m 634 ACAAAAAAAGAAATCATTGGTCTAATTGACTCA------ACAT-----TT 672
BSNT_05603___ 691 GAGCCGAT---------AGCGCCTAATTATATAGGCGAAGTGGCTTCCAG 731
||.|| |.|.|||.|.||...|||.|||||.||...|.|
BPUM_3314___m 673 ---CCCATCAAACCAGAACCTCCTCAATACCCAGGAGAAGTAGCCAACCG 719
BSNT_05603___ 732 ATTCCGCTACTTGGACGGCTCCGGAGAAATCGGCGTCATATCATCTGTAT 781
||||...|||..|||.||.||.|||||.||.|||.|.||.||.|||||.|
BPUM_3314___m 720 ATTCTTTTACCAGGATGGTTCAGGAGAGATAGGCATTATTTCTTCTGTTT 769
BSNT_05603___ 782 CTGATGCGTTCTGCGGATCTTGCAACAGAGCCCGTCTTTCTGCGAGAGGA 831
|.|||||.||.||.|||.|.||.||.|||||..|.||||||||..|.||.
BPUM_3314___m 770 CAGATGCTTTTTGTGGAACATGTAATAGAGCGAGGCTTTCTGCTCGCGGT 819
BSNT_05603___ 832 GAGCTGTTTACCTG-CTTATTCGCTTCAAGCGGATTTGACCTCAGAGC-- 878
||..|||||||.|| ||| ||.||.|||...||.||||||||.| |||
BPUM_3314___m 820 GAATTGTTTACATGTCTT-TTTGCATCATCGGGTTTTGACCTGA-AGCGG 867
BSNT_05603___ 879 -----TCCGGTTCGCCAGGAATTAAG-TGATGACGAACTATCAGAA-ATG 921
|| |||||.|| .||| |.||||.|||.|| .|||| ||
BPUM_3314___m 868 GTGATTC--GTTCGACA-----AAAGATAATGAAGAAATA-AAGAACAT- 908
BSNT_05603___ 922 ATCG--GGATAGTATGGAAAAATCG-GATCGATCAGTATTCAGTCGATCG 968
||.| ||| |.|||||...|||.| ||| |||||.|||||||.|||..|
BPUM_3314___m 909 ATTGAAGGA-ACTATGGTCGAATAGAGAT-GATCAATATTCAGCCGAGAG 956
BSNT_05603___ 969 TACGCTATCAAAAGCATCTGGCAAAAAGAAAGTGGAAATGTCTTATATTG 1018
...||.|...|||| ||| |.||.|||||.||||||||.||.||.|
BPUM_3314___m 957 AGAGCAAAAGAAAG-ATC-----AGAAAAAAGTTGAAATGTCATACATCG 1000
BSNT_05603___ 1019 GCGGTTAA 1026
|.||.||.
BPUM_3314___m 1001 GTGGGTAG 1008
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