Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05603 and BPUM_3314

See Amino acid alignment / Visit BSNT_05603 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence dna-align/BSNT_05603___moaA.1.24716.seq
#    -bsequence dna-align/BPUM_3314___moaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05603___moaA-BPUM_3314___moaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05603___moaA-BPUM_3314___moaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05603___moaA
# 2: BPUM_3314___moaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1058
# Identity:     707/1058 (66.8%)
# Similarity:   707/1058 (66.8%)
# Gaps:          82/1058 ( 7.8%)
# Score: 2114.0
# 
#
#=======================================

BSNT_05603___      1 ATGATTACAGAGTCGCGTCAG-ATGTTGGATAAAAGAAACAGACCGCTGA     49
                     |||             |.||| ||.||||||||.|||.|..||||..||.
BPUM_3314___m      1 ATG-------------GACAGTATATTGGATAAGAGACATCGACCATTGC     37

BSNT_05603___     50 GAGACCTTCGCATTTCTGTTACAGACCGCTGCAACTTCCGATGCACGTAC     99
                     |.||..|..|.||.||.||.|||||.|||||.||||||.||||.||||||
BPUM_3314___m     38 GCGATTTAAGAATATCAGTAACAGATCGCTGTAACTTCAGATGTACGTAC     87

BSNT_05603___    100 TGTATGCCCGCCGAATTATTCGGCCCGGATTATCCTTTTTTAAAGAAAGA    149
                     ||||||||.||.|||.|.||.||.||.||||||||||||||.||.|||||
BPUM_3314___m     88 TGTATGCCTGCTGAAATTTTTGGACCAGATTATCCTTTTTTGAATAAAGA    137

BSNT_05603___    150 GGAGCTGCTTTCATTTGAGGAGCTGGAACGGCTTGCGACATTGTTTGTCA    199
                     .|||||||||...||.||.||..|.||||.||||||.||..|.|||| ||
BPUM_3314___m    138 AGAGCTGCTTAGTTTCGAAGAAATTGAACAGCTTGCTACCCTTTTTG-CA    186

BSNT_05603___    200 CAAGA-TTTGGCGTTGAAAAAATCCGCCTGACCGGCGGAGAGCCCCTCAT    248
                     .|.|| .|.||.||.|..|||||.|||.|.||.||.||.||.|||.|..|
BPUM_3314___m    187 AAGGACCTAGGTGTGGTCAAAATACGCATCACAGGTGGCGAACCCTTATT    236

BSNT_05603___    249 GAGAAAGGATATGCCGGAGTTAATCAAAAAACTGGCCCGCATACCGGGTA    298
                     |.||||.|||.||||....|||||..||||.||..|...|||.||.|| |
BPUM_3314___m    237 GCGAAAAGATTTGCCTATCTTAATAGAAAAGCTCTCAAACATTCCAGG-A    285

BSNT_05603___    299 TTCG-TGACATCGCGATGACGACAAACGGATCACTGCTGCCTGTTTATGC    347
                     .||| .|||||.||.|||||.|||||.|||.||||..|.|||||.|||||
BPUM_3314___m    286 ATCGAAGACATTGCTATGACAACAAATGGAACACTTTTACCTGTATATGC    335

BSNT_05603___    348 AAAGAGGCTCAAGGAGGCTGGGCTGAAAAGGGTTACGATAAGCCTTGATT    397
                     ..|.|.|.|.|||.|.||.||.||..||||.||.||.||.||..|.||||
BPUM_3314___m    336 TGATAAGTTAAAGAAAGCAGGTCTTCAAAGAGTCACCATTAGTTTGGATT    385

BSNT_05603___    398 CTTTAGAAGAC-GAGCGTTTTAAGAAGATAAACGGGCGCGGTGTTTCTGT    446
                     |.||| ||..| ||.|||||||||.|.||.|||||..|...|.|||||.|
BPUM_3314___m    386 CATTA-AATCCTGACCGTTTTAAGCAAATGAACGGAAGGAATATTTCTAT    434

BSNT_05603___    447 CAGCAAGGTGCTGGAAGGCATTGAAGCGGCGAAGCAAGCAGGGCTCGGTG    496
                     |...||.|||.|.||.||.|||||.||.||.||..|||||||.||.|.|.
BPUM_3314___m    435 CCAAAAAGTGTTTGATGGGATTGAGGCTGCAAAAAAAGCAGGACTTGCTA    484

BSNT_05603___    497 TTAAAATCAATATGGTCGTTCAAAAGGGCGTCAATGAAAAAGATATACTG    546
                     ||||.|||||||||||.||||||||.||.||.|||||..|.|||.|..||
BPUM_3314___m    485 TTAAGATCAATATGGTTGTTCAAAAAGGTGTGAATGATCAGGATGTTTTG    534

BSNT_05603___    547 CCTATGGCCCGTTATTTTAAAGAAAAAGGGCATATCCTGAGATTCATTGA    596
                     ||.|||||...|||.||||||.||..|||.|||.|.||.|||||.|||||
BPUM_3314___m    535 CCAATGGCAGCTTACTTTAAAAAAGCAGGACATGTTCTCAGATTTATTGA    584

BSNT_05603___    597 ATTTATGGACGTAGGCAACACCAACCAATGGGAAAAGAAAG-ACGTCATG    645
                     .||||||||.||.||.||.||.|||.||| ||||...|.|| |.||||||
BPUM_3314___m    585 GTTTATGGATGTCGGAAATACGAACAAAT-GGAATCTAGAGCATGTCATG    633

BSNT_05603___    646 ACAAAGGCGGAAATCATAG----ATTTGA-TCAATGAACACATGCCGGTT    690
                     |||||....||||||||.|    |.|||| |||      ||||     ||
BPUM_3314___m    634 ACAAAAAAAGAAATCATTGGTCTAATTGACTCA------ACAT-----TT    672

BSNT_05603___    691 GAGCCGAT---------AGCGCCTAATTATATAGGCGAAGTGGCTTCCAG    731
                        ||.||         |.|.|||.|.||...|||.|||||.||...|.|
BPUM_3314___m    673 ---CCCATCAAACCAGAACCTCCTCAATACCCAGGAGAAGTAGCCAACCG    719

BSNT_05603___    732 ATTCCGCTACTTGGACGGCTCCGGAGAAATCGGCGTCATATCATCTGTAT    781
                     ||||...|||..|||.||.||.|||||.||.|||.|.||.||.|||||.|
BPUM_3314___m    720 ATTCTTTTACCAGGATGGTTCAGGAGAGATAGGCATTATTTCTTCTGTTT    769

BSNT_05603___    782 CTGATGCGTTCTGCGGATCTTGCAACAGAGCCCGTCTTTCTGCGAGAGGA    831
                     |.|||||.||.||.|||.|.||.||.|||||..|.||||||||..|.||.
BPUM_3314___m    770 CAGATGCTTTTTGTGGAACATGTAATAGAGCGAGGCTTTCTGCTCGCGGT    819

BSNT_05603___    832 GAGCTGTTTACCTG-CTTATTCGCTTCAAGCGGATTTGACCTCAGAGC--    878
                     ||..|||||||.|| ||| ||.||.|||...||.||||||||.| |||  
BPUM_3314___m    820 GAATTGTTTACATGTCTT-TTTGCATCATCGGGTTTTGACCTGA-AGCGG    867

BSNT_05603___    879 -----TCCGGTTCGCCAGGAATTAAG-TGATGACGAACTATCAGAA-ATG    921
                          ||  |||||.||     .||| |.||||.|||.|| .|||| || 
BPUM_3314___m    868 GTGATTC--GTTCGACA-----AAAGATAATGAAGAAATA-AAGAACAT-    908

BSNT_05603___    922 ATCG--GGATAGTATGGAAAAATCG-GATCGATCAGTATTCAGTCGATCG    968
                     ||.|  ||| |.|||||...|||.| ||| |||||.|||||||.|||..|
BPUM_3314___m    909 ATTGAAGGA-ACTATGGTCGAATAGAGAT-GATCAATATTCAGCCGAGAG    956

BSNT_05603___    969 TACGCTATCAAAAGCATCTGGCAAAAAGAAAGTGGAAATGTCTTATATTG   1018
                     ...||.|...|||| |||     |.||.|||||.||||||||.||.||.|
BPUM_3314___m    957 AGAGCAAAAGAAAG-ATC-----AGAAAAAAGTTGAAATGTCATACATCG   1000

BSNT_05603___   1019 GCGGTTAA   1026
                     |.||.||.
BPUM_3314___m   1001 GTGGGTAG   1008


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