Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05568 and BPUM_3295
See
Amino acid alignment /
Visit
BSNT_05568 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:11
# Commandline: needle
# -asequence dna-align/BSNT_05568___ywoD.1.24716.seq
# -bsequence dna-align/BPUM_3295___ywoD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05568___ywoD-BPUM_3295___ywoD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05568___ywoD-BPUM_3295___ywoD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05568___ywoD
# 2: BPUM_3295___ywoD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1498
# Identity: 945/1498 (63.1%)
# Similarity: 945/1498 (63.1%)
# Gaps: 248/1498 (16.6%)
# Score: 2774.5
#
#
#=======================================
BSNT_05568___ 1 ---ATGTTGTCGAAAAAAAGCCGGGCTGTTTTTTTAACAGC-GGTGGCTT 46
|.|..||.||.|.|.|.|||....||.||||||||.|| ..||.|||
BPUM_3295___y 1 ATGAAGAAGTGGAGAGACAACCGAAAAGTCTTTTTAACTGCAATTGCCTT 50
BSNT_05568___ 47 CGGGAACAATGCTGAATCCGCTGAACTCGTCTATGATCTCTCTTGCGCTC 96
.||| ||||||.|.||||||.||||.||.||.|||||.|||.|.||..|.
BPUM_3295___y 51 TGGG-ACAATGTTAAATCCGTTGAATTCCTCAATGATTTCTTTGGCCTTG 99
BSNT_05568___ 97 CATAGCATCCAGCATGA-----GTTTCACCTCTCGTTTACAACGGTTTCC 141
|||...||.|||||||| ||| |.||.|||||.||.||.||.
BPUM_3295___y 100 CATCAAATTCAGCATGAATTCGGTT-----TGTCATTTACGACTGTATCT 144
BSNT_05568___ 142 TGGCTGATTTCCTCGTTTTACTTGGCGAGTGCCGTAGCGCAGCCGGTTA- 190
|||||||||||.||.|||||.||.||.|||||.||..||||||||||.|
BPUM_3295___y 145 TGGCTGATTTCGTCTTTTTATTTAGCTAGTGCGGTGACGCAGCCGGTGAG 194
BSNT_05568___ 191 ---CGGGAAAGCTCGG---TGATTTGATTGGGCGGA-AACGCTTGTTTTT 233
|.||| |.|| |.||.||||..|.|||| ||| .||.|||||
BPUM_3295___y 195 CGGCCGGA----TTGGGGATCATGTGATGAGCCGGAGAAC-ATTATTTTT 239
BSNT_05568___ 234 ATTCGGGCTTATTCTTGTTGCGGTTTCTGCCATCGGGGCGCCGTTTGCGC 283
||||||.||...||||||.|||||.||.||.|||.|.|||||||||||.|
BPUM_3295___y 240 ATTCGGACTAGGTCTTGTGGCGGTCTCAGCTATCTGTGCGCCGTTTGCCC 289
BSNT_05568___ 284 CGACGTTT------ATGACATTATTGGTCATGCGGCTGTTTCAATCGGTG 327
|||||||| .||| |.||.||.||||||||.||..|..|.
BPUM_3295___y 290 CGACGTTTGCGGTGCTGA------TTGTGATCCGGCTGTTGCAGGCAATT 333
BSNT_05568___ 328 GGGAGCAGCGCGATTTATCCGTCAGGTGTCGG-CTTGATTCGGAATCATA 376
||||||||.||.||||||||.||.|||||||| ||| ||||||.||||||
BPUM_3295___y 334 GGGAGCAGTGCCATTTATCCTTCTGGTGTCGGACTT-ATTCGGGATCATA 382
BSNT_05568___ 377 TTCATGAGCGCCAAGCTTCAGCCTTGGCTGTACTCTCTATTTTTGCGTCC 426
|.||.||....||.||.||.||.||.||||||.|.||.||||||||.||.
BPUM_3295___y 383 TCCAAGAAAAGCAGGCATCGGCGTTAGCTGTATTGTCCATTTTTGCTTCG 432
BSNT_05568___ 427 GCCATGACGGCGCTGGGGCCGACAGTCGGCGGTTTTTTGATTGTATGG-- 474
||.|||||||||||.||.||||||.|.|||||.|||||||| |
BPUM_3295___y 433 GCGATGACGGCGCTTGGCCCGACACTTGGCGGCTTTTTGAT------GAC 476
BSNT_05568___ 475 ----GGAGGCTGGCCGGCGATCTTTATCGTTAATTTGCCGTTTATTATCC 520
||.||||||||.|||||||||.|.||.|||.||||.||||||.|..
BPUM_3295___y 477 GATCGGCGGCTGGCCAGCGATCTTTTTAGTGAATCTGCCTTTTATTTTGA 526
BSNT_05568___ 521 TCAGCTTCTTATTGGGCCTGTATATGTTCCCGAAAGATCAGAAAAAAGGG 570
|.||||||||..|.||.||.|.|.||||.|||||.||.|| |||||||.|
BPUM_3295___y 527 TTAGCTTCTTTCTTGGACTATCTTTGTTTCCGAAGGAACA-AAAAAAGAG 575
BSNT_05568___ 571 ---GC-------AGGAATCAAA----ACCATTATTCAGCAGCTCGACATT 606
|| ||| |.||| ||.| .||||||
BPUM_3295___y 576 AAAGCTACGTATAGG--TGAAACGGTACGA--------AAGCTCG----- 610
BSNT_05568___ 607 CTTGGAATTGTTTTATTTGCCGGGG--GAATCATTTTCC---TTCTA--- 648
|||||||.||| |..||.||||.| ||.||
BPUM_3295___y 611 --------------ATTTGCCAGGGATGCTTCTTTTTACCGTTTGTATTG 646
BSNT_05568___ 649 TCCTTTTTGCTGTCGT--------TCAGCACGTCGCCGCATGCGGTTGAA 690
||| |||||||.|||| |||..|.|| ||||...||.||
BPUM_3295___y 647 TCC-TTTTGCTTTCGTTTTTATTATCACTAGGT-----CATGGCATTCAA 690
BSNT_05568___ 691 GGTGTGCTTGGCTTGCTTCTG-CTCT---------GTGCGTTTGTCTGGC 730
..|||.|..||..|.||| || |||| |.||.|||.|.|||.
BPUM_3295___y 691 TATGTACAGGGGGTTCTT-TGTCTCTTGAGTGCAGGCGCTTTTATTTGGT 739
BSNT_05568___ 731 GCGAGCTGAAAAC----GGATAAGCCGTTTATTGATGTCCGTCTGTTTAA 776
|.||| .|.| ||||.|.|||||||||.|..|.||..|| ||.|
BPUM_3295___y 740 GGGAG----TATCAGGTGGATGAACCGTTTATTCAAATTCGGATG-TTCA 784
BSNT_05568___ 777 AACA----CAGCGAAACCTGTCAGCCGTGTATGTTCAGTTTATTTTATTG 822
.||| ||||| .||||||...||||||||.||.|||||..|.||.
BPUM_3295___y 785 GACAGGAGCAGCG---GCTGTCACTTGTGTATGTGCAATTTATCATTTTA 831
BSNT_05568___ 823 AATGTTTTCTTCTATTGTTTATTTTTTGGTCTGCCAAGTTACTTTCAGGA 872
|||.|.||.|||||||||.|.||.||||||.||||.||.||.||.|||||
BPUM_3295___y 832 AATATCTTTTTCTATTGTCTTTTCTTTGGTTTGCCGAGCTATTTCCAGGA 881
BSNT_05568___ 873 TGAAAT------GCATCTTTCTGTTCAAACGAGCGGCCTGTTTATGCTGT 916
||||.| || .|||..|||.||..||.||.||||||||.|
BPUM_3295___y 882 TGAATTAGGCTGGC------GTGTGGAAATGACAGGTCTTTTTATGCTTT 925
BSNT_05568___ 917 TTATGTCTGGAATGAGCATCGTTGTGTCACCTTTAACTGGAAAATGGATC 966
..||||||||..||||||||.||.|.||.||..|.||.|||||.|||.|.
BPUM_3295___y 926 GCATGTCTGGGGTGAGCATCATTATCTCTCCGCTGACGGGAAAGTGGGTG 975
BSNT_05568___ 967 GACCGATCTGGTG-TCGTCAAACCGATCTTTGCGGGAGCGCTTTTGATGA 1015
||||||...|.|| .|||| |.|||.|.||.||..|.|||.|.||||||.
BPUM_3295___y 976 GACCGAGGGGATGAACGTC-ATCCGGTATTAGCCAGTGCGGTATTGATGC 1024
BSNT_05568___ 1016 CGGCTGGAGCCGTGCTCT----TAACCATCTTTTTTATCAATGT-CGAGA 1060
.||||||||| |||| |.|||.|||||||||| | ||..|
BPUM_3295___y 1025 TGGCTGGAGC----CTCTGCGATGACCTTCTTTTTTAT-----TCCGGCA 1065
BSNT_05568___ 1061 CCATT----GGGAAAGGCCTCATTCTATCGCT---CTTGGGTATAGGCTA 1103
||||| ||.|||||.||..||||| ||| |||||...|| |.||
BPUM_3295___y 1066 CCATTATGGGGAAAAGGGCTAGTTCTA--GCTTTGCTTGGACTTA-GTTA 1112
BSNT_05568___ 1104 CGGACTGGGAAATGTCGCGCTTCAGGCAGCGATGCTGAAAACGAGTCCTT 1153
.||..|.||||||||.|||||.||.|||||||||||.||..|.||||||
BPUM_3295___y 1113 TGGGATTGGAAATGTTGCGCTGCAAGCAGCGATGCTCAAGGCAAGTCCT- 1161
BSNT_05568___ 1154 CCA--ACATGGTAGGAACGACTTCAGGCCTGTTTCAAACCTGCCGTTACC 1201
|| |.|||.|.||.|||.|.||.||.||.||||||||.|||||.||||
BPUM_3295___y 1162 -CAGCATATGATTGGCACGTCCTCTGGGCTTTTTCAAACATGCCGCTACC 1210
BSNT_05568___ 1202 TAGGATCGATTTTGTCTTC-GGTGATCCTTGGCATTCTTTTTGGTAAAGA 1250
|.||.||.|||.|.||.|| |.|| |.||.||.||.||.|||||..|.||
BPUM_3295___y 1211 TTGGTTCTATTCTTTCGTCTGCTG-TTCTCGGTATGCTGTTTGGAGACGA 1259
BSNT_05568___ 1251 AATCACGGCAGCCCATTTTGA-----TATGATGGGA-----ATCATTATG 1290
|||..|.|...|.|||||||| ||.|.| ||| ||||||||
BPUM_3295___y 1260 AATTGCTGGTCCGCATTTTGAGCAGTTAGGCT-GGACGCTGATCATTAT- 1307
BSNT_05568___ 1291 AT---CATAGCGG--GCGGAGCAAGCCTGTT------------------- 1316
| |.||.||| .|||.|..||.|| ||
BPUM_3295___y 1308 -TTCCCTTACCGGCATCGGTGTCAGTCT-TTATTTTTCGAACAAGGTCAA 1355
BSNT_05568___ 1317 --AATGGCTGTGAGATTTGCTGCATTAATGAAAAC--TGC-ATCTTAA 1359
||.|.|.|| ||.|||..|||.| ||| | |||
BPUM_3295___y 1356 AGAAGGACGGT-----------CAATAAAAAAAGCGGTGCGA---TAA 1389
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.