Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05471 and BPUM_3258
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence dna-align/BSNT_05471___ywtA.1.24716.seq
# -bsequence dna-align/BPUM_3258___ywtA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05471___ywtA-BPUM_3258___ywtA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05471___ywtA-BPUM_3258___ywtA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05471___ywtA
# 2: BPUM_3258___ywtA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 357/453 (78.8%)
# Similarity: 357/453 (78.8%)
# Gaps: 6/453 ( 1.3%)
# Score: 1384.0
#
#
#=======================================
BSNT_05471___ 1 ATGTTCGGATCAGATTTATACATCGCACTAATTTTAGGTGTACTACTCAG 50
|||||||||||||||.|.||.|||.|..|||||||||||||.|||||.||
BPUM_3258___y 1 ATGTTCGGATCAGATCTTTATATCTCGTTAATTTTAGGTGTTCTACTTAG 50
BSNT_05471___ 51 TTTAATTTTTGCGGAAAAAACAGGGATCGTGCCGGCAGGACTGGTTGTAC 100
||||||.|||||.|||||||||||.|||||.||.||.|||||.|||||||
BPUM_3258___y 51 TTTAATCTTTGCAGAAAAAACAGGAATCGTACCAGCTGGACTTGTTGTAC 100
BSNT_05471___ 101 CGGGATATTTAGGACTTGTGTTTAATCAGCCGGTCTTTATTTTACTTGT- 149
|.||.|||.|||..|||||.|||||.|||||.||.||.||||||.||||
BPUM_3258___y 101 CAGGTTATCTAGCGCTTGTATTTAACCAGCCAGTTTTCATTTTAGTTGTC 150
BSNT_05471___ 150 TTTGCTAGTGAGCTTGCTCACTTATGTTATCGTGAAATACGGTTTATCCA 199
||..|| ||.||||||||.||.|||||.|||||....|..|||.||||.|
BPUM_3258___y 151 TTATCT-GTCAGCTTGCTTACGTATGTCATCGTTCGCTTTGGTCTATCAA 199
BSNT_05471___ 200 AATTTATGATTTTGTACGGACGCAGAAAATTTGCTGCCATGCTGATAACA 249
|||||||||||||.||||||||||||||.||||||||.||||||||.|||
BPUM_3258___y 200 AATTTATGATTTTATACGGACGCAGAAAGTTTGCTGCGATGCTGATTACA 249
BSNT_05471___ 250 GGGATCGTCCTAAAAATCGCGTTTGATT--TTCTATACCCGATTGTACCA 297
|||||.|.|.||||..|.|..||||||| |||||| ||..|.||.|||
BPUM_3258___y 250 GGGATTGCCTTAAAGCTTGTCTTTGATTTCTTCTAT--CCAGTGGTCCCA 297
BSNT_05471___ 298 TTTGAAATCGCAGAATTTCGAGGAATCGGCATCATCGTGCCAGGTTTAAT 347
||||||||.||||||||.||.||||||||.||.|||||.||.||.||.||
BPUM_3258___y 298 TTTGAAATAGCAGAATTCCGCGGAATCGGTATTATCGTTCCTGGATTGAT 347
BSNT_05471___ 348 TGCCAATACCATTCAGAAACAAGGTTTAACCATTACGTTCGGAAGCACGC 397
|||.||.||.|||||.||.||||||.|.||.|||||..|.|||||||||.
BPUM_3258___y 348 TGCAAACACGATTCAAAAGCAAGGTCTTACGATTACCCTTGGAAGCACGT 397
BSNT_05471___ 398 TGCTATTGAGCGGAGCGACCTTTGCTATCATGTTTGTTTACTACTTAATT 447
|.||..|.||.||.||.||.|||||.|||||||.|||||||||..||.||
BPUM_3258___y 398 TACTTCTAAGTGGTGCAACATTTGCCATCATGTATGTTTACTATCTATTT 447
BSNT_05471___ 448 TAA 450
|||
BPUM_3258___y 448 TAA 450
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