Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05453 and BPUM_3230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:04
# Commandline: needle
# -asequence dna-align/BSNT_05453___tagD.1.24716.seq
# -bsequence dna-align/BPUM_3230___tagD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05453___tagD-BPUM_3230___tagD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05453___tagD-BPUM_3230___tagD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05453___tagD
# 2: BPUM_3230___tagD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity: 308/405 (76.0%)
# Similarity: 308/405 (76.0%)
# Gaps: 15/405 ( 3.7%)
# Score: 1119.0
#
#
#=======================================
BSNT_05453___ 1 ATG---ACAATGAAGAAAGTCATCACATACGGAACGTTTGATTTATTACA 47
||| .|||||||||||||.||.||.|||||.||.||||||||||||||
BPUM_3230___t 1 ATGTTTGCAATGAAGAAAGTTATTACTTACGGTACATTTGATTTATTACA 50
BSNT_05453___ 48 TTGGGGACATATCAAGTTATTGGAACGGGCAAAACAATTGGGGGACTATT 97
.|||||.||.||.|||.|..|.|||||.|||||.||..|.||.||.||.|
BPUM_3230___t 51 CTGGGGGCACATTAAGCTGCTTGAACGTGCAAAGCAGCTTGGAGATTACT 100
BSNT_05453___ 98 TAGTTGTAGCGATTTCGACTGACGAATTCAATCTT-CA-AAAGCAGAAAA 145
||||.||.||.||||||||.||.||.||.|| ||| || |||.|| ||||
BPUM_3230___t 101 TAGTGGTGGCCATTTCGACAGATGAGTTTAA-CTTACAGAAATCA-AAAA 148
BSNT_05453___ 146 AAGCATATCACAGCTATGAGCACCGCAAGCTGATTCTTGAAACGATCCGC 195
|.||.|||||.|||||.|||||.||.|||||.||||||||||||||.||.
BPUM_3230___t 149 AGGCTTATCATAGCTACGAGCATCGAAAGCTCATTCTTGAAACGATTCGT 198
BSNT_05453___ 196 TACGTAGACGAAGTCATCCCGGAAAAAAACTGGGATCAAAAGGTACAAGA 245
||.||||||||||||||.||.|||||.|.||||||||||||.||.|..||
BPUM_3230___t 199 TATGTAGACGAAGTCATTCCAGAAAACAGCTGGGATCAAAAAGTCCGTGA 248
BSNT_05453___ 246 TGTGATCA--ATCATGATATCGATGTATTTGTCATGGGGGATGACTGGGA 293
.||| || |.||.|||||.|||||.|||||||||||.|||||||||||
BPUM_3230___t 249 CGTG--CAAGAGCACGATATTGATGTGTTTGTCATGGGAGATGACTGGGA 296
BSNT_05453___ 294 AGGGAAATTCGACTTCCTAAAGGACTACTGCAAGGTTGTTTACCTCCCGA 343
|||.||||||||.|||.|.||.||..|.|||.|.||.||.|||.|....|
BPUM_3230___t 297 AGGTAAATTCGATTTCTTGAAAGAGCATTGCGAAGTCGTGTACTTGAAAA 346
BSNT_05453___ 344 GAACCGAAGGAATTTCCACGACAAAGATCAAAGAGGAAATCGC--GAACC 391
||||.|||||.||.||.||.|||.|.||.||.||.|||||.|| || |
BPUM_3230___t 347 GAACAGAAGGTATCTCGACAACACAAATTAAGGAAGAAATTGCAGGA--C 394
BSNT_05453___ 392 TTTAA 396
|||||
BPUM_3230___t 395 TTTAA 399
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