Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05407 and BPUM_3202

See Amino acid alignment / Visit BSNT_05407 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:02
# Commandline: needle
#    -asequence dna-align/BSNT_05407___tagO.1.24716.seq
#    -bsequence dna-align/BPUM_3202___mraY2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05407___tagO-BPUM_3202___mraY2.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05407___tagO-BPUM_3202___mraY2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05407___tagO
# 2: BPUM_3202___mraY2
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1098
# Identity:     801/1098 (73.0%)
# Similarity:   801/1098 (73.0%)
# Gaps:          51/1098 ( 4.6%)
# Score: 2862.5
# 
#
#=======================================

BSNT_05407___      1 ATGCTTGACGAACGCATGATTCGCATTGTTGTTGCGTTTATTGTCTCGCT     50
                     |||..|.|||||||       |||.||.|  |.||||||.|||||||.||
BPUM_3202___m      1 ATGGATTACGAACG-------CGCCTTAT--TAGCGTTTTTTGTCTCTCT     41

BSNT_05407___     51 -GCTGACAGTTTTAATCATAACCCCAATCGTAAAAAGGATTGCGATTAAA     99
                      ||| |||||||||||..|.||.||||||||.||.|.|.||||.|||||.
BPUM_3202___m     42 GGCT-ACAGTTTTAATTGTGACACCAATCGTCAAGAAGTTTGCAATTAAG     90

BSNT_05407___    100 ATAGGTGCAGTTGACCAGCCCAGCAATCGAAAAGTACATGACAAAATCAT    149
                     ||.||||||||.||||||||.|..||.||||||||.|||||.|||.|.||
BPUM_3202___m     91 ATTGGTGCAGTGGACCAGCCGAATAAACGAAAAGTTCATGATAAAGTAAT    140

BSNT_05407___    150 GCCCCGCATGGGCGGGCTGGCCATATTTATCGGGGTGG------------    187
                     |||.||.|||||.||..||||.||.|||||.||.||.|            
BPUM_3202___m    141 GCCTCGAATGGGTGGTTTGGCAATTTTTATTGGAGTAGCGGCTGGAGCAT    190

BSNT_05407___    188 TTGCAGGCGTGCTTGCATCCGGTATTTACA-CAGAAACAAGGATGACGGC    236
                     |.|||||||.|||        ||.|.|||| .|.|||     ||.||.||
BPUM_3202___m    191 TAGCAGGCGGGCT--------GTTTCTACATAATAAA-----ATTACAGC    227

BSNT_05407___    237 AATTACAGTCGGAGC---ATTCATCATTATTGTGTTAGGTATTCTTGACG    283
                     ||||.||||.||.||   |.|||||.|.|||   ||||||||..||||.|
BPUM_3202___m    228 AATTTCAGTTGGTGCCGTACTCATCGTCATT---TTAGGTATATTTGATG    274

BSNT_05407___    284 ATAAATATCAATTAAGTGCAAAAGTTAAGTTTTTGATTCAATTAGGTGTA    333
                     ||||||||.|.||||||||||.|.||||.|||.|..|.|||.|...|||.
BPUM_3202___m    275 ATAAATATAATTTAAGTGCAAGATTTAAATTTCTCGTACAAGTCCTTGTT    324

BSNT_05407___    334 GCCATTATGGTTGTAAGCACTGGCTTAAAAATGGACTTTTTCTCAGTACC    383
                     ||...|.||.||||.|||||.|||||||||||||||||.|||||.||.||
BPUM_3202___m    325 GCTTGTTTGATTGTGAGCACGGGCTTAAAAATGGACTTCTTCTCTGTTCC    374

BSNT_05407___    384 TTTTTTAACAGAACGATTTGAGTTAGGATGGATGGCTTATCCGCTGACGG    433
                     ||||||||||||.|||.|||||||||||||||||||||||||.||.||.|
BPUM_3202___m    375 TTTTTTAACAGATCGAATTGAGTTAGGATGGATGGCTTATCCCCTCACCG    424

BSNT_05407___    434 TATTATGGATTGTCGGCATCACGAACGCAATTAACCTGATTGATGGATTG    483
                     |..|||||||||||||.||.||.||.||.||.||..|.|||||.||..|.
BPUM_3202___m    425 TGCTATGGATTGTCGGTATTACAAATGCCATCAATTTAATTGACGGCCTT    474

BSNT_05407___    484 GATGGCCTTGCTGCCGGTCTTTCTGTTATCGGCCTGTCAACGATCGCTGT    533
                     |||||.||.|||||||||.|.|||||.|||||..|.|||||.||.||.||
BPUM_3202___m    475 GATGGACTAGCTGCCGGTATATCTGTCATCGGTTTATCAACAATTGCAGT    524

BSNT_05407___    534 CATGGCGCTATCCGGCGGAAAAG-TGCTCATTCTGTCACTCTCATTAGTC    582
                     .||||| .|.|.|.||.||.||| |.||.|||||.||..|.||..|.|||
BPUM_3202___m    525 GATGGC-ATTTTCTGCTGACAAGATTCTGATTCTTTCTTTATCTCTTGTC    573

BSNT_05407___    583 GTTATTGCCAGCACGCTGGGGTTTTTGTTTTACAACTTCCACCCGGCAAA    632
                     ||.||||.|||.|||.|.||.|||.|.|||||||||||.||.|||||.||
BPUM_3202___m    574 GTCATTGGCAGTACGATCGGCTTTCTCTTTTACAACTTTCATCCGGCGAA    623

BSNT_05407___    633 AATCTTTATGGGAGATACGGGATCACTTTTTTTAGGGTATAGTATTTCGA    682
                     .||.||||||||||||||.||.||.||.||||||||.||||..||.|||.
BPUM_3202___m    624 GATTTTTATGGGAGATACCGGTTCGCTATTTTTAGGCTATATGATCTCGG    673

BSNT_05407___    683 TTCTTTCATTATTAGGCCTGTATAAAAGTGTCACATTGTTCAGTATCGTT    732
                     |.||.|||.|.||||||.|.||.|||||||||||.|||||.|||.|.|||
BPUM_3202___m    674 TGCTGTCACTTTTAGGCTTATACAAAAGTGTCACTTTGTTTAGTGTTGTT    723

BSNT_05407___    733 ATCCCGATTATTATATTAGGCGTACCGATTTTTGATACAACATTTGCTAT    782
                     .|.||..|.||.||..||||.||.||.||.||||||||.||.|||||.||
BPUM_3202___m    724 GTTCCTGTGATCATTCTAGGTGTTCCTATATTTGATACGACCTTTGCGAT    773

BSNT_05407___    783 CATCAGGAGAATATTAAACAAACAGCCGATTTCAGCGCCTGATAAGTCGC    832
                     |||.|||.|.||||||||||||||||||||||||.|.||.||.||.||.|
BPUM_3202___m    774 CATTAGGCGTATATTAAACAAACAGCCGATTTCATCACCGGACAAATCTC    823

BSNT_05407___    833 ATATTCACCATAGACTGATGGCCTTTGGCCTTTCACATCGGATGTCAGTC    882
                     |||||||.||||||||.||||||||.|||.|.||.|||||.|||.|.|||
BPUM_3202___m    824 ATATTCATCATAGACTAATGGCCTTCGGCTTGTCCCATCGCATGGCTGTC    873

BSNT_05407___    883 TTAGTTATTTATTTGATTGGATTTATTTTCAGTATCAGTGCGATTGTGCT    932
                     .|.||.|||||..|||||||.||..|.||.||..|.|||||||||.||||
BPUM_3202___m    874 ATCGTGATTTACATGATTGGGTTAGTCTTTAGCTTAAGTGCGATTTTGCT    923

BSNT_05407___    933 TAAAAGTGCCACAATTTGGCTTTCTTTGTTTATTATCTTCATTTTA---A    979
                     .|.|||.||.||.||||||.|.||..|..|.|||||.|   |||||   .
BPUM_3202___m    924 GACAAGCGCGACCATTTGGTTATCGCTCATCATTATTT---TTTTACTGG    970

BSNT_05407___    980 TCATTTTTATGCAGATCATAGCAGAAGTGACAGGACTCGTAAATGAAAAA   1029
                     |.||.||||||||..|.||.||.|||||.||.||..|.||.||.|||.|.
BPUM_3202___m    971 TGATGTTTATGCAAGTGATTGCGGAAGTTACGGGTTTGGTCAACGAAGAG   1020

BSNT_05407___   1030 TTTAAGCCGTTTACGAAGTTTTATAAACGTCTGGTGAAAAGGAATTAA   1077
                     ||.||.||.||||||||.|||||||||||..||||.|||||..|.|||
BPUM_3202___m   1021 TTCAAACCATTTACGAAATTTTATAAACGAATGGTCAAAAGACAATAA   1068


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