Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05395 and BPUM_3199
See
Amino acid alignment /
Visit
BSNT_05395 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:01
# Commandline: needle
# -asequence dna-align/BSNT_05395___degS.1.24716.seq
# -bsequence dna-align/BPUM_3199___degS.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05395___degS-BPUM_3199___degS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05395___degS-BPUM_3199___degS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05395___degS
# 2: BPUM_3199___degS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1181
# Identity: 858/1181 (72.7%)
# Similarity: 858/1181 (72.7%)
# Gaps: 28/1181 ( 2.4%)
# Score: 3039.5
#
#
#=======================================
BSNT_05395___ 1 ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAA 50
||||..|.|.|.||.||||||.|.|||.|..|||||||.||..|.|||||
BPUM_3199___d 1 ATGACAACACCTAAAATGGATCCGAAATTATTGGATTCAATCATCATGAA 50
BSNT_05395___ 51 GATGCTGAAAACCGTTGACGGGAGCAAGGACGAAGTTTTTCAAATCGGGG 100
.|||||.|..||.|||||.||.||||||||||||||.|||...||.||.|
BPUM_3199___d 51 AATGCTAAGTACAGTTGATGGCAGCAAGGACGAAGTATTTAGGATAGGCG 100
BSNT_05395___ 101 AGCAGTCACGCCAGCAGTATGAACAG-CTGGTCGAAGAACTGAAACAAAT 149
|.|||||.||.||.||.|||||| || ||.||.|||||.|||||.|||||
BPUM_3199___d 101 AACAGTCCCGTCAACAATATGAA-AGCCTTGTAGAAGAGCTGAAGCAAAT 149
BSNT_05395___ 150 TAAACAGCAGGTGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGC 199
.||.|||||.||..|.|||||.||.||..||||.||||||||.|||||.|
BPUM_3199___d 150 CAAGCAGCAAGTAAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTCC 199
BSNT_05395___ 200 AAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGTAATTTTCAT 249
|.||..|.|||||.|||||.||.|||||.|||||||||.|.||.||..|.
BPUM_3199___d 200 ATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGAAACTTCAAC 249
BSNT_05395___ 250 AGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCT 299
|.|||.||.|||||.|||||.|||.|.||.||.||||||||.|||||.||
BPUM_3199___d 250 AAATTTAGCGAAGAAGAAATACGCGAGGCCTACGAAAAAGCACATAATCT 299
BSNT_05395___ 300 GCAGGTAGAATTGACGATGATCCAGCAGCGTGAGAAGCAATTGCGCGAAC 349
|||.||.|||.|.||.||||||||||||||.||.|||||..||.|.|||.
BPUM_3199___d 300 GCAAGTGGAACTCACCATGATCCAGCAGCGCGAAAAGCAGCTGAGAGAAA 349
BSNT_05395___ 350 GGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAG 399
|..|.||.|||.|.||..|..|||||.||.|.||.||.||..|||||||.
BPUM_3199___d 350 GAAGAGATGATCTAGAAAGACGATTGTTAAGCCTACAAGACGTCATTGAA 399
BSNT_05395___ 400 CGGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAA 449
||.||.|||.|..|.||.|||||.||.||||||||.||.|||||..|.||
BPUM_3199___d 400 CGCTCTGAAACGCTTGTGAGCCAGATCACAGTTGTTCTTAACTATCTCAA 449
BSNT_05395___ 450 TCAGGATTTGCGCGAAGTTGGACTGCTTCTTGCTGATGCTCAGGCAAAAC 499
||||||.||.|||.|||||||..||.|.||||..||||||||.|||||||
BPUM_3199___d 450 TCAGGACTTACGCCAAGTTGGCGTGTTACTTGAAGATGCTCAAGCAAAAC 499
BSNT_05395___ 500 AGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGA 549
|.|||||.||..|.||.||||||||.||.||.||||||||.||.|||||.
BPUM_3199___d 500 AAGATTTTGGACTGAGAATTATTGAAGCCCAAGAAGAAGAACGTAAAAGG 549
BSNT_05395___ 550 GTCTCAAGAGAAATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTAT 599
||.||..|.|||||.|||||.||.||.||.|||||||||||.||.||.||
BPUM_3199___d 550 GTATCCCGTGAAATTCATGATGGTCCGGCCCAAATGCTGGCAAACGTGAT 599
BSNT_05395___ 600 GATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGGGCGCAGAGG 649
||||.|.||.||||||||.||.||||||||..|.|||||.||..||||.|
BPUM_3199___d 600 GATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGTGGAACAGAAG 649
BSNT_05395___ 650 ACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTT 699
|.||.||..|||||||||.||.|||..|.||.|||||.||.|||||.||.
BPUM_3199___d 650 AAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTG 699
BSNT_05395___ 700 TACGAAGTGAGAAGGATTATATATGATTTAAGACCGATGGCCCTTGATGA 749
||||||||||||||.||.||.||||||||||||||.|||||..|.|||||
BPUM_3199___d 700 TACGAAGTGAGAAGAATCATTTATGATTTAAGACCAATGGCTTTAGATGA 749
BSNT_05395___ 750 CCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAAT 799
..|.||.||.|||||.||..|||||||||||.||.|.||||.|||.||.|
BPUM_3199___d 750 TTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAGT 799
BSNT_05395___ 800 ATAACGGGAAGGTCAA-AATACATTTTCAGTGCATTGGAGAAACAGAGGA 848
||.|.||.||...||| |.||| .||.||.|||.|.|||||.||||| .|
BPUM_3199___d 800 ATGATGGAAAAACCAAGATTAC-GTTCCAATGCCTAGGAGATACAGA-AA 847
BSNT_05395___ 849 TC-AGAGGCTAGCGCCTCAGTTTGAGGTTGCGCTCTTCAGGCTCGCACAG 897
.| |.||..|.||..||||.|||||.||.||.||.||.||.||.||.||.
BPUM_3199___d 848 GCGAAAGAATTGCTTCTCAATTTGAAGTGGCACTGTTTAGACTAGCCCAA 897
BSNT_05395___ 898 GAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGT 947
||||||||..|.|||.|.|||||||||||.|||.||||||||||..|.||
BPUM_3199___d 898 GAAGCTGTCACAAATTCACTAAAGCATTCCGAAGCTGAAGAAATCTCTGT 947
BSNT_05395___ 948 CAAAGTTGAGATCACAAAGGATTTTGTGATTTTAATGATAAAAGATAACG 997
.|||||.||..|.||.||.||.|||||.|..|||||.||.||||||.|.|
BPUM_3199___d 948 GAAAGTAGAAGTGACGAAAGACTTTGTCACGTTAATTATCAAAGATGATG 997
BSNT_05395___ 998 GTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAAATCATTC 1047
|.|||||.||.||..||||.||.|.||||...||.|||||.|||||.|||
BPUM_3199___d 998 GAAAAGGTTTTGATATGAAAGATGTGAAAACAAATAAAAATAAATCCTTC 1047
BSNT_05395___ 1048 GGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGAC 1097
||.||.||.||||||||||||.|.|||||.|||.|||||||.|..|||||
BPUM_3199___d 1048 GGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGAC 1097
BSNT_05395___ 1098 AATAGATTCGAAAATAGGTCTTGGGACATTTATTATGATTAAGGTTCCGT 1147
.||.||.||.|||||||||||.||||||||.||.||||||...||.||.|
BPUM_3199___d 1098 CATTGACTCAAAAATAGGTCTAGGGACATTCATCATGATTCGCGTGCCAT 1147
BSNT_05395___ 1148 TATCTCTTTGA-------------------- 1158
|| .|.|||.
BPUM_3199___d 1148 TA--ACATTGCAAAATAAAATTGTAAAATAG 1176
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.