Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05384 and BPUM_3189
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_05384___flgL.1.24716.seq
# -bsequence dna-align/BPUM_3189___flgL.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05384___flgL-BPUM_3189___flgL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05384___flgL-BPUM_3189___flgL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05384___flgL
# 2: BPUM_3189___flgL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1017
# Identity: 595/1017 (58.5%)
# Similarity: 595/1017 (58.5%)
# Gaps: 225/1017 (22.1%)
# Score: 1476.0
#
#
#=======================================
BSNT_05384___ 1 ATGAGAGTAACACAAGGCATGATACAGCAAAACTCACTGAGATATATCGG 50
|||.||||.||||||||.|||||....|||||||||||..|..||||
BPUM_3189___f 1 ATGCGAGTCACACAAGGTATGATTTCTCAAAACTCACTTCGTAATAT--- 47
BSNT_05384___ 51 TTCGAGCTACTCGAAGCT-GGATAAACT---------------CCAGTCG 84
||.|..|||.| .||.||||| .|||.|.
BPUM_3189___f 48 -------TAGTAAAAGTTATGAAAAACTTTCTAAAATAAATGAGCAGGCA 90
BSNT_05384___ 85 CAGATTTCTTCAGGGAAAAAAATCTCAAAAGCTTCCGACGATCCTGTAGT 134
||.| ||||||.|....||.|||||.|.||.||.||||||||.|.
BPUM_3189___f 91 CAAA------CAGGGAGACGTTTCACAAAAACGTCTGATGATCCTGTTGC 134
BSNT_05384___ 135 AGCAATGAAAAG-CTTAAAGTATAATAC-GCAACTGTCTC-AAGTG---- 177
||||.|.||||| |||.|| ||||.||| ||.| |||.|| ||.||
BPUM_3189___f 135 AGCAGTAAAAAGCCTTCAA-TATAGTACTGCCA-TGTTTCGAAATGAACA 182
BSNT_05384___ 178 -CAGCAGTACAA--------AAGCAATGCCTCTCAAGCCTTTACCTGGCT 218
.|.|||.|.|| ||||| ||| |.||||.|
BPUM_3189___f 183 ATATCAGAATAACTTAAATGAAGCA--------CAA------AACTGGAT 218
BSNT_05384___ 219 CGAAAACA-CAGAAACAAACATTACAGAAGGAATTGACATCTTGTCAAAG 267
.| |.||| |.|||||||...|.||.|||...|||||.||..|||||||.
BPUM_3189___f 219 TG-ATACATCTGAAACAAGTGTCACTGAAATCATTGATATTATGTCAAAT 267
BSNT_05384___ 268 GTCAGAGAATTAGCGGTTGA---AGCTCAAAATGATACAAA-CGGCGAGG 313
||..||||...||.|.|||| |||| ||||.|||||| |.||.||.
BPUM_3189___f 268 GTTCGAGATAAAGTGCTTGATGCAGCT---AATGGTACAAAGCAGCCAGA 314
BSNT_05384___ 314 CG---GAGCGGCAAGCGATTGGCGTAGAA----GTAAAGCAGTTAAAGGA 356
.| .||| |||.||.||.||.||| || |||.|.|||.|
BPUM_3189___f 315 AGATTTAGC----AGCTATCGGAGTGGAAATTGGT----CAGATGAAGAA 356
BSNT_05384___ 357 ACAGCTTTTAAAT-AT---TGCGAATACACAAGTGAAC-GGCAGATAT-- 399
|| |||| || ||||| ||||| ..|||||.|
BPUM_3189___f 357 AC-------AAATCATTGATGCGA---------TGAACACTCAGATGTTA 390
BSNT_05384___ 400 ---------ATCTTTAATGGCACAAATTCAGAT----AAGCCTCCGGTTA 436
.|.||||||||.||||||.||.|| || ||.|||.
BPUM_3189___f 391 GGTAAGTTCGTATTTAATGGAACAAATACAAATGTTAAA----CCAGTTG 436
BSNT_05384___ 437 CAGATAACGGAGACGGAACTTATAC----AATTTCTG------ATACAGC 476
..||.||||.|||.||.||.|.||| ||.|| || ||||||.
BPUM_3189___f 437 TCGAAAACGCAGATGGTACGTTTACGTTTAACTT-TGAAAACTATACAGA 485
BSNT_05384___ 477 TG---ATGTCGT--AGTC-AATATATCAAATAATATGTCATTGAAAGTGA 520
|| ||..||| |||| ||.||.|||.||..|||..|.||.||.||||
BPUM_3189___f 486 TGCAAATTCCGTTAAGTCGAACATTTCAGATGGTATCACTTTAAATGTGA 535
BSNT_05384___ 521 ATTCAGATCCAAAGTCAGCTTTTGGAGGCAC-TTCTGAAAGCGGGCAAAA 569
|.|||.||||||..|||||.|||||.|| || .||||..|||||.|||||
BPUM_3189___f 536 ACTCAAATCCAATTTCAGCGTTTGGTGG-ACAGTCTGCCAGCGGCCAAAA 584
BSNT_05384___ 570 TGTATTTGAAATGCT---TGATTCTTTTGAGAAAGCACT-------AAAT 609
|||..|||||||||| .|| ||.||||| ||| |||
BPUM_3189___f 585 TGTCATTGAAATGCTGACGGA-----TTTAGAAA--ACTCATTGAAAAA- 626
BSNT_05384___ 610 TCTG----GTTCGCTA-----GATGGCATGGACAATGTTTTAGATGA--T 648
|| ||||||.| |||| |||..|||| || .
BPUM_3189___f 627 --TGGAACGTTCGCAAATTCTGATG---------ATGCGTTAG--GAAGC 663
BSNT_05384___ 649 ATTGATCATTTTTCTGACGGCATGAGTGCTGAACGATCTGATCTT-GGAG 697
||.|||||.|||...||.|..|||||||||||.||.||.|| ||| ||||
BPUM_3189___f 664 ATCGATCAGTTTAAAGAAGTGATGAGTGCTGAGCGCTCGGA-CTTAGGAG 712
BSNT_05384___ 698 CGAGATATAATCGTCTTGAACTGGTTAATACG--------AGACTGTCAG 739
||.|.|..||||||.|||| .|||.||.| .|||| |||
BPUM_3189___f 713 CGCGTTCAAATCGTGTTGA----CTTAGTAGGCAGCCGTTTGACT-TCA- 756
BSNT_05384___ 740 CGCAA---GAAGAAACAGCTACCAAAG-TGTTA--TCAGACAATGAAGAT 783
||| .||| .||| ||||| ||.|| ||..|.|||||||||
BPUM_3189___f 757 --CAATTCCAAG----TGCT--CAAAGATGCTAAGTCTAATAATGAAGAT 798
BSNT_05384___ 784 GTAGAACTGGAAGAGGTAATAACTGAATTTATTGCGCAGCAAAGTGTGCA 833
||.|||...|||.|.|.|||...|||..||.||...||..|||.||||.|
BPUM_3189___f 799 GTTGAAAGTGAAAAAGCAATTCTTGATCTTCTTCAACAAGAAACTGTGAA 848
BSNT_05384___ 834 CAGGGCTACTCTGGC--CGTTAATGCGCAAATTGTTCAGCC-TACATTGA 880
.||.||..||.|.|| || |..||..||.|..||||||| |.|.|||
BPUM_3189___f 849 TAGAGCAGCTTTAGCAACG--ACGGCTAAAGTCATTCAGCCATCCCTTG- 895
BSNT_05384___ 881 TTGACTTTTTAAAGTAA 897
|.||.||.||||..|||
BPUM_3189___f 896 TCGATTTCTTAAGATAA 912
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