Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05382 and BPUM_3187
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_05382___fliW.1.24716.seq
# -bsequence dna-align/BPUM_3187.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05382___fliW-BPUM_3187.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05382___fliW-BPUM_3187.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05382___fliW
# 2: BPUM_3187
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 297/460 (64.6%)
# Similarity: 297/460 (64.6%)
# Gaps: 53/460 (11.5%)
# Score: 866.5
#
#
#=======================================
BSNT_05382___ 1 ATGATCATTCATACGAAGTACCATGGCCAAATGAACATAAAAGAAGAACA 50
|||||||||||.||.||.||||||||..||.||||.||.|||||.||.||
BPUM_3187 1 ATGATCATTCAAACAAAATACCATGGTGAAGTGAAAATCAAAGAGGAGCA 50
BSNT_05382___ 51 AATCA-----TTCTTTTTGAAAGCGGGATTCCAGGCTTTTTAGAAGAAAA 95
|||.| ||||.| |..||.||.|||||.|||.|.||..||||
BPUM_3187 51 AATGATCAACTTCTCT-----AATGGAATACCAGGATTTCTGGATCAAAA 95
BSNT_05382___ 96 ACAGTTCGTCATACTTCCGCTTTCAGAAGACTCTCCATTCGTGGCACTGC 145
||||||.|||||..|.||..|.||||||||.||.||||| |..
BPUM_3187 96 ACAGTTTGTCATTTTACCTTTATCAGAAGAGTCACCATT--------TTT 137
BSNT_05382___ 146 AGTCCGTCACTTCA--GAAAATC------TT--GCGTTTATCGTCGTAAG 185
|||.|.||| .||| |||||.| || || |||||.|||...||
BPUM_3187 138 AGTTCTTCA-ATCATTGAAAAACGCAGAGTTAGGC-TTTATTGTCAGCAG 185
BSNT_05382___ 186 TCCGTTTATCTTTTTTAAGAATTATGAATTTGATCTTGATGA----ATCA 231
||||||..|.||.||.||..|.||||||||.|||||.||.|| .||
BPUM_3187 186 TCCGTTCTTATTCTTCAACCAATATGAATTCGATCTAGACGAGACGGTC- 234
BSNT_05382___ 232 ACTGCTGAACTTTTGGATATCGATAATATTC--AAGACGTAGAAGTCATG 279
|..||..|||||||..| |.||.||.| |.||.||.|||||||||
BPUM_3187 235 ---GTAGAGATTTTGGAAGT--AGAAGATGCGAATGATGTGGAAGTCATG 279
BSNT_05382___ 280 ACAATATTGACTATGGCAGAGCCAT---TTGAAAAGTCTACTGCGAATTT 326
...||.||.||.||| ||..||| |||||||..|.||.||.|||||
BPUM_3187 280 GTGATCTTAACAATG---GAATCATCTATTGAAAAAACGACAGCCAATTT 326
BSNT_05382___ 327 ATTGGCTCCCATTATTGTGAATCGCAAGAACATGATGGCTAAGCAAGTCG 376
|...||.||.|||||.|||||.||.||.|||||||..||.||.||.||..
BPUM_3187 327 AAGAGCGCCTATTATCGTGAACCGGAAAAACATGAAAGCCAAACAGGTGA 376
BSNT_05382___ 377 TTTTACACGACTCCTCATATACGACAAAGCATCCGATTGGAGG----AGA 422
||||.||.||.||..|.|||...|||||.|||..| ||.|||| |..
BPUM_3187 377 TTTTGCATGATTCAGCTTATCATACAAAACATTTG-TTAGAGGTGGCATC 425
BSNT_05382___ 423 ATCATGCTAG 432
.|||||.|||
BPUM_3187 426 CTCATGTTAG 435
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