Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05381 and BPUM_3186
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_05381___csrA.1.24716.seq
# -bsequence dna-align/BPUM_3186___csrA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05381___csrA-BPUM_3186___csrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05381___csrA-BPUM_3186___csrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05381___csrA
# 2: BPUM_3186___csrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 176/232 (75.9%)
# Similarity: 176/232 (75.9%)
# Gaps: 14/232 ( 6.0%)
# Score: 657.5
#
#
#=======================================
BSNT_05381___ 1 ATGCTAGTTTTATCGCGGAAAATAAACGAAGCGATTCAAATAGGTGCTGA 50
|||.|||||.|.|||||.|||.|||||.|..||||||||||.||.|.|||
BPUM_3186___c 1 ATGTTAGTTCTCTCGCGTAAATTAAACCAGTCGATTCAAATTGGCGATGA 50
BSNT_05381___ 51 TATTGAAGTGAAAGTGATTGCGGTTGAGGGGGATCAAGTGAAGCTTGGAA 100
|||||||||.||..|.|||.|..|.||.||.|||||||||||..|.||.|
BPUM_3186___c 51 TATTGAAGTCAAGATTATTTCAATCGAAGGCGATCAAGTGAAAATAGGGA 100
BSNT_05381___ 101 TTGACGCCCCAAAGCATATTGATATTCATAGGAAAGAAATTTATTTGACC 150
||||.||.||.|||||.|||||||||||.|||||||||.|.||..||.|.
BPUM_3186___c 101 TTGAAGCTCCTAAGCACATTGATATTCACAGGAAAGAAGTGTACCTGTCT 150
BSNT_05381___ 151 ATTCAGGAAGAAAATAACCGTGCGGC-AGCGTTATCCAGCGATGT-GATC 198
|||||.||||||||.||.|||||.|| || .|||||| || ||||
BPUM_3186___c 151 ATTCAAGAAGAAAACAATCGTGCTGCGAG-TTTATCC------GTAGATC 193
BSNT_05381___ 199 TCCAC-----ATTATCCTCACAAAAAAAGTGA 225
|||.| ||||||||||||||||||||||
BPUM_3186___c 194 TCCTCTCTCAATTATCCTCACAAAAAAAGTGA 225
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