Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05369 and BPUM_3177
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_05369.1.24716.seq
# -bsequence dna-align/BPUM_3177___prfB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05369-BPUM_3177___prfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05369-BPUM_3177___prfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05369
# 2: BPUM_3177___prfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 989
# Identity: 771/989 (78.0%)
# Similarity: 771/989 (78.0%)
# Gaps: 10/989 ( 1.0%)
# Score: 2980.0
#
#
#=======================================
BSNT_05369 1 ATGGCTGATCCGGAATTCTGGAATGATCAGCAAAAAGCTCAAACGGTTAT 50
|||.|.||..|.||.||.|||||||||||||||||.||.|||...||.||
BPUM_3177___p 1 ATGTCAGAGGCTGATTTTTGGAATGATCAGCAAAAGGCACAAGGCGTCAT 50
BSNT_05369 51 AAATGAAGCAAACGGTTTAAAGGATTATGTCAATTCGTATAAAAAATTGA 100
.||||||||.||.|...||||||||.||||.|||.|.||..|..|..|.|
BPUM_3177___p 51 CAATGAAGCCAATGCGCTAAAGGATAATGTGAATGCATACCATGAGCTCA 100
BSNT_05369 101 ATGAATCCCACGAAGAATTACAAATGACTCATGATCTTTTGAAAGAAGA- 149
.||||||.||.|||||..|.||||||||.|||||.||.||.||.|||||
BPUM_3177___p 101 GTGAATCTCATGAAGAGCTGCAAATGACACATGACCTATTAAAGGAAGAT 150
BSNT_05369 150 ---GCCGGACACTGATCTCCAGCTTGAGCTTGAAAAAGAACT-AAAATCA 195
|.||.| ||.||.||..|.||||||||.|||||.|| ||.|.|
BPUM_3177___p 151 TATGACGAA----GAGCTTCATGTAGAGCTTGAGAAAGAGCTGAAGAAC- 195
BSNT_05369 196 TTAACAAAAGACTTCAATGAGTTTGAGCTTCAGCTTCTTCTCAGCGAGCC 245
|||||.||..|.||.||.|||||||||.|.||||||||..|.||.||.||
BPUM_3177___p 196 TTAACCAAGCAATTTAACGAGTTTGAGTTGCAGCTTCTCTTAAGTGAACC 245
BSNT_05369 246 GTATGATAAAAATAACGCGATTTTAGAACTGCACCCTGGTGCTGGCGGTA 295
.|||||||||||.||.||.||..|.||.||.|||||.|||||.|||||||
BPUM_3177___p 246 ATATGATAAAAACAATGCCATCCTCGAGCTTCACCCAGGTGCAGGCGGTA 295
BSNT_05369 296 CAGAGTCACAGGACTGGGGCTCTATGCTTCTTAGAATGTATACAAGATGG 345
|.||.||||||||||||||.|||||||||.|.|||||||||||..|.|||
BPUM_3177___p 296 CTGAATCACAGGACTGGGGTTCTATGCTTTTGAGAATGTATACTCGCTGG 345
BSNT_05369 346 GGAGAGCGCCGCGGCTTTAAAGTAGAAACACTCGATTACCTTCCAGGTGA 395
|.|||||||.|.||||||||.||.|||||.||.|||||.|||||.|||||
BPUM_3177___p 346 GCAGAGCGCAGGGGCTTTAAGGTTGAAACGCTTGATTATCTTCCTGGTGA 395
BSNT_05369 396 CGAGGCTGGAATCAAGTCAGTGACATTGCTCATCAAAGGACATAACGCTT 445
.||.||.|||||.|||||.||.|||||||||||||||||.||||||||.|
BPUM_3177___p 396 TGAAGCAGGAATTAAGTCTGTCACATTGCTCATCAAAGGGCATAACGCAT 445
BSNT_05369 446 ACGGGTATCTCAAAGCAGAAAAAGGTGTCCATCGTCTTGTGCGGATCTCA 495
||||.||..|.||||||||||||||.|||||||||||.||.||.||.||.
BPUM_3177___p 446 ACGGCTACTTAAAAGCAGAAAAAGGCGTCCATCGTCTGGTTCGTATTTCT 495
BSNT_05369 496 CCATTTGATTCATCAGGCCGCCGCCACACATCTTTCGTTTCATGTGAAGT 545
||.|||||||||||.||.||..|.||.||.|||||||||||.|||||.||
BPUM_3177___p 496 CCTTTTGATTCATCTGGTCGTAGACATACTTCTTTCGTTTCCTGTGATGT 545
BSNT_05369 546 CATGCCTGAATTTAACGATGAAATTGATATTGATATTCGTGCGGAGGATA 595
|||||||||.||.||.||.|||||.||||||||||||||..|.||.||||
BPUM_3177___p 546 CATGCCTGAGTTCAATGAAGAAATCGATATTGATATTCGAACAGAAGATA 595
BSNT_05369 596 TTAAAGTTGACACGTACCGTGCAAGCGGCGCGGGCGGACAGCACGTCAAT 645
|.|||||.||.|||||.||||||||||||||.||.|||||||||||||||
BPUM_3177___p 596 TCAAAGTAGATACGTATCGTGCAAGCGGCGCTGGTGGACAGCACGTCAAT 645
BSNT_05369 646 ACGACGGATTCAGCCGTTCGGATTACTCACTTGCCGACGAACGTAGTTGT 695
||||||||.||.||||||||.||.||.||..|.||.||.||.||.||.||
BPUM_3177___p 646 ACGACGGACTCTGCCGTTCGTATCACACATATTCCAACCAATGTCGTGGT 695
BSNT_05369 696 GACATGCCAAACGGAGCGCTCACAAATTAAAAACCGTGAAAGAGCCATGA 745
|||||||||||||||..|.||||||||.||||||.|.|||.|.||.||||
BPUM_3177___p 696 GACATGCCAAACGGAAAGATCACAAATCAAAAACAGAGAACGTGCGATGA 745
BSNT_05369 746 AAATGCTGAAGGCCAAGCTGTATCAGCGCAGAATTGAAGAGCAGCAGGCT 795
|||||||.||..|.||.||.|||||..|..|.||.|||||.|||||||||
BPUM_3177___p 746 AAATGCTAAAATCGAAACTTTATCAAAGACGGATCGAAGAACAGCAGGCT 795
BSNT_05369 796 GAACTGGATGAAATTCGTGGTGAACAAAAAGAAATCGGCTGGGGCAGCCA 845
||..|||||||||||.|.||.||.||.||||||||.||||||||.|||||
BPUM_3177___p 796 GAGTTGGATGAAATTAGAGGAGAGCAGAAAGAAATTGGCTGGGGAAGCCA 845
BSNT_05369 846 AATCCGTTCTTATGTATTCCATCCGTATTCCATGGTAAAAGACCATCGGA 895
|||.||.|||||||||||||||||||||||..|.||||||||||||||.|
BPUM_3177___p 846 AATTCGCTCTTATGTATTCCATCCGTATTCTCTTGTAAAAGACCATCGTA 895
BSNT_05369 896 CCAATACAGAAATGGGGAACGTTCAAGCTGTAATGGATGGTGACATTGAT 945
|||||||.||.|||||.||.||||||||.||.||||||||.||..|.|||
BPUM_3177___p 896 CCAATACGGAGATGGGAAATGTTCAAGCAGTCATGGATGGAGATTTAGAT 945
BSNT_05369 946 ACGTTTATTGATGCCTACCTGCGTTCTAAGCTTTCATAA 984
.|.|||||.||.||.||..|.|||||.||..|.||||||
BPUM_3177___p 946 TCATTTATCGACGCATATTTACGTTCGAAATTATCATAA 984
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