Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05351 and BPUM_3150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence dna-align/BSNT_05351___csbA.1.24716.seq
# -bsequence dna-align/BPUM_3150.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05351___csbA-BPUM_3150.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05351___csbA-BPUM_3150.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05351___csbA
# 2: BPUM_3150
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity: 179/247 (72.5%)
# Similarity: 179/247 (72.5%)
# Gaps: 17/247 ( 6.9%)
# Score: 649.0
#
#
#=======================================
BSNT_05351___ 1 TTGATTACAAAAGCCGTTTTTGCA-TTGTTTTTCCCTTTTATGCTTGTTG 49
.||||||||||||||.|.|||||| |||||||| |||||..||||||||.
BPUM_3150 1 GTGATTACAAAAGCCATATTTGCACTTGTTTTT-CCTTTCCTGCTTGTTA 49
BSNT_05351___ 50 TTCTATTTACTAGAGTCACCTTTAATCATTATGTGGCGATCGCTTTAACA 99
||.|||||.|.|..||.||.|.||||||||||||||..||.||.||||||
BPUM_3150 50 TTTTATTTTCAAAGGTGACTTATAATCATTATGTGGGCATTGCATTAACA 99
BSNT_05351___ 100 GCTGCATTGCTGTTTGCCTCTTATTTAAAAGGCTATACAGAAACGTATTT 149
||.||..|..|.||||||||.|||.|.||.||||||||||||||.||.||
BPUM_3150 100 GCAGCGCTTTTATTTGCCTCGTATATGAAGGGCTATACAGAAACCTACTT 149
BSNT_05351___ 150 TATTGTAGGATTGGATGTTGTGTCTCTTGTGGCTGGCGGACTGTACATGG 199
||||||||||||.|||.|..|.|||.|.||.|||||.|.|.|.||.||||
BPUM_3150 150 TATTGTAGGATTAGATATCATTTCTTTAGTAGCTGGTGCATTATATATGG 199
BSNT_05351___ 200 CCAAAAAAG---CTGCAGAGA---AAAAAGAAGAATAA--------- 231
|.||||||| .||.|.||| ||||.|..|||.||
BPUM_3150 200 CTAAAAAAGAAATTGAAAAGAGAGAAAAGGCTGAAAAACATCATTGA 246
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