Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05327 and BPUM_3137
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence dna-align/BSNT_05327___hprK.1.24716.seq
# -bsequence dna-align/BPUM_3137___hprK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05327___hprK-BPUM_3137___hprK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05327___hprK-BPUM_3137___hprK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05327___hprK
# 2: BPUM_3137___hprK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 943
# Identity: 715/943 (75.8%)
# Similarity: 715/943 (75.8%)
# Gaps: 20/943 ( 2.1%)
# Score: 2638.0
#
#
#=======================================
BSNT_05327___ 1 GTGGCAAAGGTTCGCACAAAAGACGTAATGGAACAGTTCAATTTGGAATT 50
|||.|.||.|||||.||.||.|||.||||||||||.||..||.|.|||.|
BPUM_3137___h 1 GTGCCGAAAGTTCGTACGAAGGACATAATGGAACAATTTCATCTTGAACT 50
BSNT_05327___ 51 AATCAGCGGAGAAGAAGGAATTAACCGCCCGATTACAATGAGTGACCTAT 100
..|.||.||.||||||||.|||||.||.||.||||||||.|||||.||.|
BPUM_3137___h 51 GGTAAGTGGGGAAGAAGGGATTAATCGTCCCATTACAATCAGTGATCTTT 100
BSNT_05327___ 101 CAAGACCAGGCATTGAAATTGCCGGATATTTTACATATTACCCGAGAGAG 150
|.||||||||.||||||||.||.||.|||||||||||||||||.|.|||.
BPUM_3137___h 101 CCAGACCAGGTATTGAAATGGCTGGTTATTTTACATATTACCCAAAAGAA 150
BSNT_05327___ 151 CGCGTGCAGCTTCTCGGAAAAACAGAGCTTTCTTTCTTTGAACAGCTTCC 200
.|.||.||.|||.|.||.|||||||||||||||||.|||||||||||.||
BPUM_3137___h 151 AGAGTTCAACTTTTAGGGAAAACAGAGCTTTCTTTTTTTGAACAGCTCCC 200
BSNT_05327___ 201 TGAAGAGGAGAA--AAAACAGCGAATGGAT-TCTCTGTGCACTGATGTAA 247
.|| |.|.||| |||.|||.|||| ||| |||||.||.||||||.|.|
BPUM_3137___h 201 AGA--ACGCGAACGAAAGCAGAGAAT-GATGTCTCTTTGTACTGATATTA 247
BSNT_05327___ 248 CACCAGCTATTATTCTTTCTAGAGAT----ATGCCCATCCCGCAGGAGCT 293
|.||.||.||||||.|.||..||||| |.| |.|||.|||||.|
BPUM_3137___h 248 CTCCTGCAATTATTTTGTCACGAGATCGTGAAG----TGCCGAAGGAGTT 293
BSNT_05327___ 294 GATTGACGCATCCGAGAAAAATGGGGTGCCTGTCCTCAGATC--GCCGCT 341
.|||||.||.||..|..|||||||.||.|||||..|..|.|| || ||
BPUM_3137___h 294 AATTGAAGCTTCAAATGAAAATGGCGTACCTGTGTTACGTTCAAGC--CT 341
BSNT_05327___ 342 GAAAACGACAAGACTGTCAAGCCGTTTAACCAACTTCCTTGAGAGCAGGC 391
.|||||||||||||||||.||.|||||.||||||||..|.||.||||.||
BPUM_3137___h 342 AAAAACGACAAGACTGTCGAGTCGTTTGACCAACTTTTTAGAAAGCAAGC 391
BSNT_05327___ 392 TGGCGCCTACCACGGCGATTCATGGCGTTCTTGTCGATATATATGGTGTC 441
|.||.||.||.||.||.||||||||.||.||.||.|||.||||||||||.
BPUM_3137___h 392 TTGCACCAACGACTGCTATTCATGGTGTGCTCGTAGATGTATATGGTGTA 441
BSNT_05327___ 442 GGCGTGCTGATCACAGGAAAAAGCGGCGTCGGGAAAAGTGAAACAGCGCT 491
||.||..||.|.|..|||||||||||.||.||.||||||||||||||..|
BPUM_3137___h 442 GGTGTATTGTTAATTGGAAAAAGCGGAGTAGGAAAAAGTGAAACAGCCTT 491
BSNT_05327___ 492 GGAGCTTGTGAAAAGAGGGCATCGCCTTGTTGCCGATGATTGCGTTGAAA 541
.||..|.|||||.|||||.||..|.||.||.||.|||||||||||.||||
BPUM_3137___h 492 AGAATTAGTGAAGAGAGGACACAGGCTGGTCGCAGATGATTGCGTAGAAA 541
BSNT_05327___ 542 TACGGCAGGAGGATCAGGATACTCTTGTGGGAAACGCTCCGGAATTAATT 591
|.||.||.||||||||||||||..|.||.||||.|||.||.||..|.|||
BPUM_3137___h 542 TCCGTCAAGAGGATCAGGATACGTTAGTCGGAAGCGCACCTGAGCTGATT 591
BSNT_05327___ 592 GAGCACCTTCTTGAGATCAGGGGCCTTGGCATTATCAATGTGATGACGCT 641
||.||.|||.|.||.|||.|.||..|.||||||||.|||||||||||..|
BPUM_3137___h 592 GAACATCTTTTAGAAATCCGTGGATTAGGCATTATTAATGTGATGACCTT 641
BSNT_05327___ 642 ATTTGGCGCTGGCGCGGTCAGAAGCAATAAACGAATCACGATTGTCATGA 691
||||||.|||||.||.|||||||||.||||..||||.||||||||.||||
BPUM_3137___h 642 ATTTGGAGCTGGGGCTGTCAGAAGCTATAAGAGAATTACGATTGTGATGA 691
BSNT_05327___ 692 ATCTTGAACTCTGGGAGCAGGGCAAGCAATACGACCGGCTCGGACTTGAG 741
||||||||||.|||||.||.|||||.||.|||||.||..|.||||||||.
BPUM_3137___h 692 ATCTTGAACTTTGGGAACAAGGCAAACAGTACGATCGTTTAGGACTTGAA 741
BSNT_05327___ 742 GAAGAGACCATGAAAATCATTGATACAGAAATTACAAAACTGACGATTCC 791
|||||||..|||..||||||.||||||||..|..|.||.|||||.|||||
BPUM_3137___h 742 GAAGAGAAGATGCGAATCATCGATACAGATGTACCGAAGCTGACCATTCC 791
BSNT_05327___ 792 CGTCCGCCCAGGCCGAAATCTT-GCAGTCATCATTGAAGTGGCAGCAATG 840
.|||||.||.||.||||| ||| ||.||.||.|||||||||||.||.|||
BPUM_3137___h 792 TGTCCGGCCTGGACGAAA-CTTAGCGGTTATTATTGAAGTGGCTGCGATG 840
BSNT_05327___ 841 AACTTCAGATTGAAGCGGATGGGGCTGAATGCCGCTGAACAATTTACCAA 890
||||||||.||.||.||.|||||.|..|||||.||.|||||||||||.|.
BPUM_3137___h 841 AACTTCAGGTTAAAACGCATGGGACATAATGCGGCGGAACAATTTACAAG 890
BSNT_05327___ 891 CAAGCTGGCGGACGTCATTGAAGACGGTGAACAAGAAGAATAG 933
.||.||.||.||.||||||||||||..||..|||||.||||||
BPUM_3137___h 891 TAAACTAGCCGATGTCATTGAAGACAATGGCCAAGATGAATAG 933
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