Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05193 and BPUM_3083
See
Amino acid alignment /
Visit
BSNT_05193 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_05193___yveK.1.24716.seq
# -bsequence dna-align/BPUM_3083.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05193___yveK-BPUM_3083.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05193___yveK-BPUM_3083.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05193___yveK
# 2: BPUM_3083
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 823
# Identity: 447/823 (54.3%)
# Similarity: 447/823 (54.3%)
# Gaps: 209/823 (25.4%)
# Score: 1010.0
#
#
#=======================================
BSNT_05193___ 1 ATGAATGAGAATATGAGTTTCAAAGAATTATATGCGATTGTCA-GACACA 49
||||||||||||||..||||.||..|..|.|.|.| ||||| .|.|.|
BPUM_3083 1 ATGAATGAGAATATAGGTTTTAAGCAGCTGTTTTC---TGTCATTAAAGA 47
BSNT_05193___ 50 GA---------TTCGTG---CTGATTCTGCTCATCACAATCGGC--GTCA 85
|| ||| || ||||||.|.||.|||..||..||| .|||
BPUM_3083 48 GAAAATGGCCCTTC-TGATCCTGATTGTCCTGATCGTAACGGGCATTTCA 96
BSNT_05193___ 86 CCCTTATTATGGGTTTTGTGCAATTTAAGGTCATTTCACCGAC------C 129
.|| ||.|||..|||.| ||.|| .|||| .
BPUM_3083 97 GCC-TACTATCAGTTCT---------------ATGTC-TCGACTCCTGTA 129
BSNT_05193___ 130 TACCAGGCGTCGACACAGGTGCTGGTTCAT----GAATCA--GACGGTGA 173
||.|||||..|.||.||..|.||.|||||| |.|.|| ||||...|
BPUM_3083 130 TATCAGGCAACCACTCAAATTCTTGTTCATAAACGCAGCAATGACGCACA 179
BSNT_05193___ 174 AGAAAACTCGAATCTCAGTGACATCCAGCGAAATCTTCAGTATAGCAGCA 223
||.||||| |.|..||.||.|||...||.|||||.|||| ||
BPUM_3083 180 AGCAAACT------TAAACGATATTCAGATGAACCTTCAATATA----CA 219
BSNT_05193___ 224 CGTTCCAATCGA---TTATGAAAAGCACTGC---CTTGATGGAAGAAGTT 267
|||.||..||.| ||||.|||| |.|.| |.|.||.|||.||||.
BPUM_3083 220 CGTACCTTTCAAGTTTTATTAAAA--AGTCCAATCGTCATTGAAAAAGTA 267
BSNT_05193___ 268 AAGGCGGAATTGCACCTATCTGAATCGGCTTCCTCGCTGAAAGG------ 311
||.|....|.|..||||..|.|||||.||| .||||
BPUM_3083 268 AAAGAAACACTCAACCTCACAGAATCAGCT---------GAAGGATTAAA 308
BSNT_05193___ 312 ----AAAAGTGGTTACCAGCAGT---GAAAATGAATCAGAAATCATTAAC 354
|||| ||.|||..||| ||||||||.|||||..|||||||.
BPUM_3083 309 ACACAAAA----TTGCCACAAGTACAGAAAATGAGTCAGAGGTCATTAAT 354
BSNT_05193___ 355 GTTGCCGTCCAGGATCACGATCCGGCGAAAGCGGCTGAGATTGCGAACAC 404
.||.|.||.||.|||.|.||||..||.||.||.|.||..||||||||
BPUM_3083 355 ATTTCTGTACAAGATGAGGATCGCGCAAAGGCAGTTGCCATTGCGAA--- 401
BSNT_05193___ 405 GTTAGTG-AACA-AGTT--TG-AAAAAGAAGTAGATGAAAGA----ATGA 445
||.|| |||| ||.| || ||.||||| ||.|||.| ||||
BPUM_3083 402 --TACTGCAACAGAGGTGCTGCAAGAAGAA----ATCAAAAAAACCATGA 445
BSNT_05193___ 446 ATGTACAAGGCGTACATATATTATCAGAGGCGA-----------AGGCTT 484
||.|..|..||.|..||.|.||.||.||.||.| |.|.||
BPUM_3083 446 ATATGGATCGCATTAATGTTTTGTCTGAAGCCAAACTGTCCAATACGATT 495
BSNT_05193___ 485 CTGAAAGCCCGATGA--TCAAGCCGGCCAGGCTGCGAA---------ATA 523
|| .|||| |||| ||| |||
BPUM_3083 496 CT--------TATGAATTCAA--------------GAAAATTCGTTCATA 523
BSNT_05193___ 524 TGGTCATGGCTTTTGGCGCTGCTGTCATGGGCGGCATTACACTGGCATTT 573
|.||..||||..|.|||||..||.|..|.||.||..|.||||| |||||
BPUM_3083 524 TCGTACTGGCACTAGGCGCCTCTTTATTAGGGGGGGTAACACT--CATTT 571
BSNT_05193___ 574 --TTTCTGCATTTTCTCGATGATACTTGCAAAA-GTGCACGGCAGCTCAG 620
||..||.|.||.||||||||||| ||.|||| |..|||..||..|.||
BPUM_3083 572 TCTTAATGAACTTACTCGATGATAC-TGTAAAACGAACACATCAAATAAG 620
BSNT_05193___ 621 CGAGAGA-ACCGGATTGCCAT-GCTTAGGCTCCGTTCCT----GATGTCC 664
.|| ||| |.|||||||||.| || |.|||..||| || ||||
BPUM_3083 621 AGA-AGAGATCGGATTGCCGTCGC-TCGGCAGCGT--CTATCAGATG--- 663
BSNT_05193___ 665 ACAAAGGGCGGAATCGCGGGATAAAA--------CATTTCG-------GG 699
|| |||.||...|.|||..|||| ||.|.|| ||
BPUM_3083 664 -CA---GGCAGACAGGAGGGCAAAAAAAGACAAGCAGTCCGTCATAACGG 709
BSNT_05193___ 700 GAG----------TGA------- 705
||| |||
BPUM_3083 710 GAGGACAGAACATTGATCTTTAA 732
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.