Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05192 and BPUM_3082
See
Amino acid alignment /
Visit
BSNT_05192 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence dna-align/BSNT_05192___yveL.1.24716.seq
# -bsequence dna-align/BPUM_3082.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05192___yveL-BPUM_3082.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05192___yveL-BPUM_3082.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05192___yveL
# 2: BPUM_3082
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 751
# Identity: 448/751 (59.7%)
# Similarity: 448/751 (59.7%)
# Gaps: 134/751 (17.8%)
# Score: 1193.0
#
#
#=======================================
BSNT_05192___ 1 GTGATCTTT---GGAAAAAAGAAAGCAAGGCGAGGTTTGGCTCAAATAT- 46
.|||||||| .||||.||.|.||.||.|.|||.|| |||
BPUM_3082 1 TTGATCTTTAAGAGAAAGAAAAGAGAAAAGAGAGATT---------TATC 41
BSNT_05192___ 47 CTGTTTTACACAATAAA--------TCAGTTGTTGCGGAACAATATCGCA 88
||||.||.||..||.|| ||.||..|.||.|||||||..||.|
BPUM_3082 42 CTGTATTTCAGTATTAAATCCTCACTCTGTCATAGCAGAACAATTCCGTA 91
BSNT_05192___ 89 CCATTCGGACAAACATTGAGTTCTCATCTGTCCAGACCAACTTGCGATCT 138
|.||.||.||.||||||||.|||.||||..||||.||.|..|||..||||
BPUM_3082 92 CGATCCGAACGAACATTGAATTCACATCCATCCAAACAAGGTTGAAATCT 141
BSNT_05192___ 139 ATCCTCGTCACCTCCTCTGTGCCTGGTGAAGGTAAATCGTTCAGTGCAGC 188
||..|.||.||.|||||..||||....|||||.|||||.||.|..||.||
BPUM_3082 142 ATATTGGTGACATCCTCCTTGCCGAAGGAAGGGAAATCATTTACGGCTGC 191
BSNT_05192___ 189 GAATCTTGCGGCTGTCTTTGCGCAGCAGCAGGAAAAGAAAGTACTGCTGG 238
.||.||.||.|||||.||||| .||||||.|||||...||.||||||.
BPUM_3082 192 AAACCTAGCAGCTGTTTTTGC---ACAGCAGAAAAAGCGGGTGCTGCTGA 238
BSNT_05192___ 239 TGGATGCCGATTTAAGAAAGCCGAC----CATCAATCA----GAC--GTT 278
|||||||.|||||..||||||||.| |||.||| | ||| |..
BPUM_3082 239 TGGATGCTGATTTGCGAAAGCCGGCTGTTCATGAAT-ATTTTGACCTGAG 287
BSNT_05192___ 279 TCAGGTTGATAATGTAACCGGGC-TGACAAATGTGCTGGTCGGCAATGCT 327
||| |.||| ||||| ||||.||||||||..| .|||..|
BPUM_3082 288 TCA---TCATA-------CGGGCTTGACCAATGTGCTATT---AAATAAT 324
BSNT_05192___ 328 TCACTCAG--TGAGACGGTGCAAAAG-----------ACGCCGATTGATA 364
| .||| || ||.| ||| ||.||.|||||..
BPUM_3082 325 T---GCAGCTTG-GAGG------AAGCCATTTTACCCACACCCATTGAGC 364
BSNT_05192___ 365 ACTTATATGTACTGACAAGCGGGCCGACCCCGCCAAACCCGGCAGAACTG 414
|.|||.|..|.||..|.|||||..|.|..|||||.||.||.||.||.|||
BPUM_3082 365 ATTTAGAGCTGCTTCCGAGCGGAACCATTCCGCCGAATCCAGCTGAGCTG 414
BSNT_05192___ 415 CTGTCTTC--------AAAAGCAATGGGAGACTTAATATCTGAGATC--- 453
||.||.|| ..||||| |..|..||| |||.|||
BPUM_3082 415 CTCTCCTCTTCTGTCATGAAGCA---GCTGTTTTA-----TGAAATCGAA 456
BSNT_05192___ 454 ------TATGAACAATTCAGCCTCGTCATCTTTGATTCCCCTCCGCTTTT 497
|||||| .|.||.||..|.|||||..|.||||||.|
BPUM_3082 457 CAGCAATATGAA---------ATGGTGATTGTGGATTCTGCGCCGCTTCT 497
BSNT_05192___ 498 GGCTGTTGCAGATGCTCAGATTCTAGCAAATCAAACAGACGGCAGCGTGC 547
|.|.||.||.|||||..||||.||.||.||.|..|||||.||.|||.|.|
BPUM_3082 498 GCCAGTGGCCGATGCAAAGATCCTGGCGAACCGGACAGATGGAAGCATTC 547
BSNT_05192___ 548 TCGTCGTTTTAAGCGGAAAAACAAAAACCGATA----CCGTTCTGAAAGC 593
||||.||.||||||||.|||||||| |||| |.||...||||.|
BPUM_3082 548 TCGTTGTCTTAAGCGGCAAAACAAA----GATAGCTGCAGTGAAGAAATC 593
BSNT_05192___ 594 AAAAGATGCACT----GGAACAATCCAATGCGAAGCTGTTAGGCGCTCTT 639
||||||.|.|.| ||.|||| || |..||.||..|.||.|||.|.
BPUM_3082 594 AAAAGAAGTATTAGACGGGACAA--CA--GGTAAACTACTTGGAGCTATG 639
BSNT_05192___ 640 TTAA----ACAAAAAGAAAATGAAAAAATCGGAA--CACTATTCCTACTA 683
.||| |.||||||| |||||| .|||| |..|||...||.||
BPUM_3082 640 CTAAATGGAAAAAAAGA----GAAAAA--GGGAAGGCTGTATATGTATTA 683
BSNT_05192___ 684 G 684
.
BPUM_3082 684 A 684
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.