Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05172 and BPUM_3064
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence dna-align/BSNT_05172___yvfG.1.24716.seq
# -bsequence dna-align/BPUM_3064.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05172___yvfG-BPUM_3064.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05172___yvfG-BPUM_3064.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05172___yvfG
# 2: BPUM_3064
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 164/229 (71.6%)
# Similarity: 164/229 (71.6%)
# Gaps: 23/229 (10.0%)
# Score: 597.5
#
#
#=======================================
BSNT_05172___ 1 ATGTCTGAACTTTTTTCCGTCCCTTATTTTATTGAGAATTTAAAACAGCA 50
||||||||||||||||||||.||.||.|||.||||.||.||.||||||||
BPUM_3064 1 ATGTCTGAACTTTTTTCCGTTCCATACTTTGTTGACAACTTGAAACAGCA 50
BSNT_05172___ 51 TATTGAAATGAATCAGTCTGAGGATAAAATCCACGCGATGAACAGC-TAC 99
.||.|..||||||||...|||.||.|||||.||.|||||||| .|| ||.
BPUM_3064 51 CATCGCCATGAATCAAAATGAAGACAAAATTCATGCGATGAA-TGCTTAT 99
BSNT_05172___ 100 TACCGTTCCGTTGTCTCAACACTCGTGCAGGACCAGCTGACGAAAAACGC 149
|||||.||.||.||.||||||||.||.||.||.||||||||.||||||||
BPUM_3064 100 TACCGCTCAGTGGTGTCAACACTTGTACAAGATCAGCTGACCAAAAACGC 149
BSNT_05172___ 150 AGTTGTCCTGAAACGGATTCAGCATTTAGATGAAGCATACAACAAAGTCA 199
.||.||..||||.||.|||||||||.|.|||||.||.|| |||
BPUM_3064 150 TGTGGTTTTGAAGCGTATTCAGCATCTTGATGAGGCGTA--------TCA 191
BSNT_05172___ 200 AACGTGGAGAATCAAAATAA--------- 219
|| .||.||| ||||.||
BPUM_3064 192 AA--AGGTGAA--AAAAGAAAGTGAATGA 216
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