Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05172 and BPUM_3064

See Amino acid alignment / Visit BSNT_05172 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:50
# Commandline: needle
#    -asequence dna-align/BSNT_05172___yvfG.1.24716.seq
#    -bsequence dna-align/BPUM_3064.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05172___yvfG-BPUM_3064.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05172___yvfG-BPUM_3064.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05172___yvfG
# 2: BPUM_3064
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity:     164/229 (71.6%)
# Similarity:   164/229 (71.6%)
# Gaps:          23/229 (10.0%)
# Score: 597.5
# 
#
#=======================================

BSNT_05172___      1 ATGTCTGAACTTTTTTCCGTCCCTTATTTTATTGAGAATTTAAAACAGCA     50
                     ||||||||||||||||||||.||.||.|||.||||.||.||.||||||||
BPUM_3064          1 ATGTCTGAACTTTTTTCCGTTCCATACTTTGTTGACAACTTGAAACAGCA     50

BSNT_05172___     51 TATTGAAATGAATCAGTCTGAGGATAAAATCCACGCGATGAACAGC-TAC     99
                     .||.|..||||||||...|||.||.|||||.||.|||||||| .|| ||.
BPUM_3064         51 CATCGCCATGAATCAAAATGAAGACAAAATTCATGCGATGAA-TGCTTAT     99

BSNT_05172___    100 TACCGTTCCGTTGTCTCAACACTCGTGCAGGACCAGCTGACGAAAAACGC    149
                     |||||.||.||.||.||||||||.||.||.||.||||||||.||||||||
BPUM_3064        100 TACCGCTCAGTGGTGTCAACACTTGTACAAGATCAGCTGACCAAAAACGC    149

BSNT_05172___    150 AGTTGTCCTGAAACGGATTCAGCATTTAGATGAAGCATACAACAAAGTCA    199
                     .||.||..||||.||.|||||||||.|.|||||.||.||        |||
BPUM_3064        150 TGTGGTTTTGAAGCGTATTCAGCATCTTGATGAGGCGTA--------TCA    191

BSNT_05172___    200 AACGTGGAGAATCAAAATAA---------    219
                     ||  .||.|||  ||||.||         
BPUM_3064        192 AA--AGGTGAA--AAAAGAAAGTGAATGA    216


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