Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05134 and BPUM_3057
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence dna-align/BSNT_05134___gapA.1.24716.seq
# -bsequence dna-align/BPUM_3057___gapA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05134___gapA-BPUM_3057___gapA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05134___gapA-BPUM_3057___gapA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05134___gapA
# 2: BPUM_3057___gapA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1008
# Identity: 889/1008 (88.2%)
# Similarity: 889/1008 (88.2%)
# Gaps: 0/1008 ( 0.0%)
# Score: 3969.0
#
#
#=======================================
BSNT_05134___ 1 ATGGCAGTAAAAGTCGGTATTAACGGTTTTGGTCGTATTGGACGTAACGT 50
||||||||||||||||||||||||||.|||||.|||||||||||||||||
BPUM_3057___g 1 ATGGCAGTAAAAGTCGGTATTAACGGATTTGGACGTATTGGACGTAACGT 50
BSNT_05134___ 51 ATTCCGCGCAGCATTAAACAATCCTGAAGTTGAGGTAGTAGCGGTTAACG 100
|||.||.|||||||||||||||||||||||||||||||||||||||||||
BPUM_3057___g 51 ATTTCGTGCAGCATTAAACAATCCTGAAGTTGAGGTAGTAGCGGTTAACG 100
BSNT_05134___ 101 ATTTAACAGATGCTAACATGCTGGCTCACCTTTTACAATATGATTCTGTA 150
||.|||||||.|||||||||||.||.|||||||||||||||||.|||||.
BPUM_3057___g 101 ATCTAACAGACGCTAACATGCTTGCACACCTTTTACAATATGACTCTGTT 150
BSNT_05134___ 151 CACGGAAAATTAGACGCTGAAGTTTCAGTTGACGGTAACAACCTTGTTGT 200
|||||||||.||||.||.||.|||||.||.||.||||..|||.|.||.||
BPUM_3057___g 151 CACGGAAAACTAGATGCAGAGGTTTCTGTAGATGGTACGAACTTAGTAGT 200
BSNT_05134___ 201 TAACGGCAAAACAATTGAAGTTTCTGCAGAACGCGATCCTGCTAAACTTA 250
.|||||.||||||||.|||||.||.||.||.||.||.|||||.|||.|.|
BPUM_3057___g 201 GAACGGTAAAACAATCGAAGTATCAGCTGAGCGTGACCCTGCGAAATTAA 250
BSNT_05134___ 251 GCTGGGGCAAACAAGGCGTTGAAATCGTAGTTGAATCTACTGGTTTCTTC 300
|||||||.|||||||||||.||||||||.||||||||||||||.||||||
BPUM_3057___g 251 GCTGGGGTAAACAAGGCGTAGAAATCGTTGTTGAATCTACTGGATTCTTC 300
BSNT_05134___ 301 ACAAAACGCGCAGACGCTGCGAAACACTTAGAAGCTGGCGCGAAAAAAGT 350
||||||||.|||||||||||.||||||||||||||||||||.||||||||
BPUM_3057___g 301 ACAAAACGTGCAGACGCTGCAAAACACTTAGAAGCTGGCGCTAAAAAAGT 350
BSNT_05134___ 351 AATCATCTCTGCTCCTGCTAACGAAGAAGATATCACAATCGTTATGGGTG 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_3057___g 351 CATCATCTCTGCTCCTGCTAACGAAGAAGATATCACAATCGTTATGGGTG 400
BSNT_05134___ 401 TTAACGAAGATAAATACGATGCGGCTAACCACGATGTTATCTCTAACGCA 450
|.||||||||.|||||||||||.||||.|||||||||.||||||||.|||
BPUM_3057___g 401 TAAACGAAGACAAATACGATGCAGCTAGCCACGATGTCATCTCTAATGCA 450
BSNT_05134___ 451 TCTTGCACAACAAACTGCCTTGCGCCGTTTGCAAAAGTACTTAACGATAA 500
|||||.||||||||||||.|.||.||.|||||||||||||||||||||||
BPUM_3057___g 451 TCTTGTACAACAAACTGCTTAGCTCCATTTGCAAAAGTACTTAACGATAA 500
BSNT_05134___ 501 ATTCGGCATCAAACGCGGTATGATGACAACTGTTCACTCTTACACAAACG 550
|||.||.||.||||||||||||||||||||.||||||||.||||||||.|
BPUM_3057___g 501 ATTTGGTATTAAACGCGGTATGATGACAACAGTTCACTCATACACAAATG 550
BSNT_05134___ 551 ATCAGCAAATCCTTGATCTTCCGCACAAAGACTACCGTCGTGCGCGTGCA 600
|.||.|||||.||||||||||||||||||||||||||||||||.||||||
BPUM_3057___g 551 ACCAACAAATTCTTGATCTTCCGCACAAAGACTACCGTCGTGCTCGTGCA 600
BSNT_05134___ 601 GCAGCTGAAAACATCATCCCTACATCAACTGGTGCTGCTAAAGCAGTTTC 650
||.||.||||||||||||||.||.||.||.||||||||.|||||.|||||
BPUM_3057___g 601 GCTGCGGAAAACATCATCCCAACTTCTACAGGTGCTGCGAAAGCTGTTTC 650
BSNT_05134___ 651 TCTAGTTCTTCCTGAACTAAAAGGCAAACTGAACGGTGGAGCAATGCGTG 700
.||.||..|.||||||||.|||||.|||.|.||||||||.||.|||||||
BPUM_3057___g 651 ACTTGTATTGCCTGAACTTAAAGGTAAATTAAACGGTGGCGCTATGCGTG 700
BSNT_05134___ 701 TTCCAACTCCAAACGTTTCTCTAGTTGACTTGGTTGCTGAACTGAACCAA 750
|||||||.||.|||||||||.||||||||.|.||.||||||.|.||||||
BPUM_3057___g 701 TTCCAACACCTAACGTTTCTTTAGTTGACCTTGTAGCTGAATTAAACCAA 750
BSNT_05134___ 751 GAAGTAACAGCTGAAGAAGTAAACGCAGCTCTTAAAGAAGCGGCTGAAGG 800
||.|||||.||||||||.|||||.|||||.|||||||||||.||||||||
BPUM_3057___g 751 GATGTAACGGCTGAAGATGTAAATGCAGCACTTAAAGAAGCAGCTGAAGG 800
BSNT_05134___ 801 CGACCTTAAAGGAATCCTTGGCTACAGCGAAGAGCCATTAGTTTCTGGCG 850
.||.|||||.||||||||||||||||||||||||||||||||.|||||.|
BPUM_3057___g 801 AGAACTTAATGGAATCCTTGGCTACAGCGAAGAGCCATTAGTATCTGGTG 850
BSNT_05134___ 851 ACTACAACGGAAACAAAAACTCTTCTACAATCGATGCTCTTTCTACAATG 900
||||.||.||.||...|||||||||.||||||||||||||||||||||||
BPUM_3057___g 851 ACTATAATGGTAATGCAAACTCTTCAACAATCGATGCTCTTTCTACAATG 900
BSNT_05134___ 901 GTTATGGAAGGCAGCATGGTAAAAGTAATCTCTTGGTACGATAACGAAAG 950
||.|||||||||||||||||.|||||.||.|||||||||||||||||.||
BPUM_3057___g 901 GTAATGGAAGGCAGCATGGTGAAAGTCATTTCTTGGTACGATAACGAGAG 950
BSNT_05134___ 951 CGGCTACTCTAACCGCGTTGTTGACCTTGCAGCTTACATCGCAAAAAAAG 1000
.||.||.|||.||||||||||||||||||||||||||||.||||||.|||
BPUM_3057___g 951 TGGATATTCTCACCGCGTTGTTGACCTTGCAGCTTACATTGCAAAACAAG 1000
BSNT_05134___ 1001 GTCTTTAA 1008
||||||||
BPUM_3057___g 1001 GTCTTTAA 1008
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