Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05129 and BPUM_3053
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence dna-align/BSNT_05129___eno.1.24716.seq
# -bsequence dna-align/BPUM_3053___eno.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05129___eno-BPUM_3053___eno.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05129___eno-BPUM_3053___eno.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05129___eno
# 2: BPUM_3053___eno
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1295
# Identity: 1138/1295 (87.9%)
# Similarity: 1138/1295 (87.9%)
# Gaps: 4/1295 ( 0.3%)
# Score: 5038.0
#
#
#=======================================
BSNT_05129___ 1 ATGCCATACATTGTTGATGTTTATGCACGCGAAGTATTAGACTCCCGCGG 50
|||||||||||||||||.||.|||||||||||||||||||||||.|||||
BPUM_3053___e 1 ATGCCATACATTGTTGACGTATATGCACGCGAAGTATTAGACTCTCGCGG 50
BSNT_05129___ 51 CAACCCAACAGTTGAAGTTGAAGTATATACAGAAACAGG-AGCTTTCGGC 99
.|||||||||||||||||.|||||.||.||||||.|.|| .||||| |||
BPUM_3053___e 51 TAACCCAACAGTTGAAGTAGAAGTTTACACAGAATCTGGCGGCTTT-GGC 99
BSNT_05129___ 100 CGCGCATTAGTGCCAAGCGGAGCTTCTACAGGTGAATACGAAGCGGTTGA 149
||.|||.||||.|||||.||.|||||||||||||||||.|||||.||.||
BPUM_3053___e 100 CGTGCACTAGTACCAAGTGGTGCTTCTACAGGTGAATATGAAGCAGTAGA 149
BSNT_05129___ 150 GCTTCGTGACGGCGACAAAGACCGTTACCTTGGAAAAGGCGTGTTAACAG 199
.||.||||||||.|||||||||||||||||.||||||||.||..|.||||
BPUM_3053___e 150 ACTACGTGACGGAGACAAAGACCGTTACCTAGGAAAAGGTGTTCTGACAG 199
BSNT_05129___ 200 CTGTTAACAACGTAAACGAAATCATTGCTCCAGAGCTTCTTGGCTTTGAT 249
||||.|||||||||||||||||||||||.|||||||||.|.|||||||||
BPUM_3053___e 200 CTGTAAACAACGTAAACGAAATCATTGCACCAGAGCTTTTAGGCTTTGAT 249
BSNT_05129___ 250 GTAACTGAACAAAACGCAATCGATCAGCTTTTAATCGAGCTTGACGGTAC 299
||.|||||||||...|||||.||..|..|.||||||||.|||||.||.||
BPUM_3053___e 250 GTCACTGAACAAGTAGCAATTGACAAAATGTTAATCGAACTTGATGGAAC 299
BSNT_05129___ 300 TGAAAACAAAGGTAAACTTGGTGCGAACGCAATCCTTGGCGTATCTATGG 349
.|||||.|||||.|||.|.||.||.|||||||||||||||||||||||.|
BPUM_3053___e 300 AGAAAATAAAGGGAAATTAGGCGCAAACGCAATCCTTGGCGTATCTATCG 349
BSNT_05129___ 350 CTTGT-GCGCGTGCTGCTGCTGATTTCTTACAGATTCCTCTTTACCAATA 398
| ||| ||.|||||.|||||||||||||||||.|||||.|||||||||||
BPUM_3053___e 350 C-TGTAGCACGTGCGGCTGCTGATTTCTTACAAATTCCACTTTACCAATA 398
BSNT_05129___ 399 CCTTGGAGGATTCAACTCAAAAACGCTTCCTGTACCGATGATGAACATCG 448
||||||.|||||||||||.|||||||||||.|||||.|||||||||||||
BPUM_3053___e 399 CCTTGGTGGATTCAACTCCAAAACGCTTCCAGTACCAATGATGAACATCG 448
BSNT_05129___ 449 TAAACGGCGGAGAGCATGCTGATAACAACGTGGATATTCAAGAATTCATG 498
|.||.||||||||||||||.|||||||||||.||.|||||||||||||||
BPUM_3053___e 449 TCAATGGCGGAGAGCATGCGGATAACAACGTAGACATTCAAGAATTCATG 498
BSNT_05129___ 499 ATCATGCCTGTAGGTGCTCCTAACTTCCGTGAAGCACTTCGCATGGGCGC 548
||.||||||||||||||.||.|||||||||||||||||||||||||||||
BPUM_3053___e 499 ATTATGCCTGTAGGTGCACCGAACTTCCGTGAAGCACTTCGCATGGGCGC 548
BSNT_05129___ 549 TCAAATCTTCCACAGCCTGAAATCAGTATTAAGCGCAAAAGGCTTAAACA 598
.|||||||||||.|||||.|||||.||||||||.||||||||||||||||
BPUM_3053___e 549 ACAAATCTTCCATAGCCTAAAATCTGTATTAAGTGCAAAAGGCTTAAACA 598
BSNT_05129___ 599 CTGCTGTAGGTGACGAAGGCGGATTCGCTCCAAACCTTGGTTCTAACGAA 648
|.|||||||||||||||||.||||||||||||||||||||||||||||||
BPUM_3053___e 599 CAGCTGTAGGTGACGAAGGTGGATTCGCTCCAAACCTTGGTTCTAACGAA 648
BSNT_05129___ 649 GAAGCGCTTCAAACAATCGTTGAAGCAATCGAAAAAGCCGGCTTCAAACC 698
|||||.||||||||||||||.|||||.||.||||||||.||.||||||||
BPUM_3053___e 649 GAAGCACTTCAAACAATCGTAGAAGCGATTGAAAAAGCTGGTTTCAAACC 698
BSNT_05129___ 699 TGGCGAAGAAGTTAAACTTGCTATGGATGCTGCATCTTCTGAGTTCTACA 748
.||.||||||||.||||||||.||||||||||||||||||||||||||||
BPUM_3053___e 699 AGGTGAAGAAGTGAAACTTGCAATGGATGCTGCATCTTCTGAGTTCTACA 748
BSNT_05129___ 749 ACAAAGAAGACGGCAAATACCATCTGTCTGGCGAAGGCGTTGTGAAAACA 798
|||||||||||||.|||||.|||.|.||.||||||||.||||||||||||
BPUM_3053___e 749 ACAAAGAAGACGGTAAATATCATTTATCAGGCGAAGGTGTTGTGAAAACA 798
BSNT_05129___ 799 TCTGCTGAAATGGTTGACTGGTATGAAGAGCTTGTTTCTAAATACCCAAT 848
|||||||||||||||||||||||||||||..|.||.||.|||||||||||
BPUM_3053___e 799 TCTGCTGAAATGGTTGACTGGTATGAAGATATGGTATCGAAATACCCAAT 848
BSNT_05129___ 849 CATCTCGATCGAAGACGGACTTGACGAAAACGACTGGGAAGGCCACAAGC 898
||||||.|||||||||||.|||||.|||||||||||||||||.|||||.|
BPUM_3053___e 849 CATCTCAATCGAAGACGGCCTTGATGAAAACGACTGGGAAGGTCACAAAC 898
BSNT_05129___ 899 TTCTTACTGAGCGTCTTGGCAAAAAAGTTCAGCTTGTTGGTGACGACCTC 948
|..|.||||||||.|||||.|..||.||||||||.||.||.||.|||.|.
BPUM_3053___e 899 TATTAACTGAGCGCCTTGGTAGCAAGGTTCAGCTAGTAGGAGATGACTTG 948
BSNT_05129___ 949 TTCGTTACAAACACGAAAAAACTTTCTGAAGGTATTAAAAACGGCGTAGG 998
|||||.|||||||||||.||.|||||||||||.||.|||||||||||.||
BPUM_3053___e 949 TTCGTGACAAACACGAAGAAGCTTTCTGAAGGAATCAAAAACGGCGTTGG 998
BSNT_05129___ 999 CAACTCTATCCTGATCAAAGTAAACCAAATCGGTACATTGACTGAAACAT 1048
.|||||.|||||.||||||||||||||||||||||||||.||||||||||
BPUM_3053___e 999 TAACTCAATCCTAATCAAAGTAAACCAAATCGGTACATTAACTGAAACAT 1048
BSNT_05129___ 1049 TCGATGCGATCGAAATGGCGAAACGCGCAGGCTACACAGCTGTTATCTCT 1098
|.|||||.|||||||||||.|||||.|||||.||||||||||||||||||
BPUM_3053___e 1049 TTGATGCAATCGAAATGGCAAAACGTGCAGGATACACAGCTGTTATCTCT 1098
BSNT_05129___ 1099 CACCGTTCTGGTGAAACTGAAGACAGCACAATCGCTGACATCGCTGTGGC 1148
|||||.|||||||||||.|||||.||||||||.||.||.||||||||.||
BPUM_3053___e 1099 CACCGCTCTGGTGAAACAGAAGATAGCACAATTGCAGATATCGCTGTTGC 1148
BSNT_05129___ 1149 AACAAACGCAGGACAAATCAAAACAGGTGCTCCGTCTCGTACGGACCGTG 1198
|||||||||.||||||||||||||||||||||||||||||||||||||||
BPUM_3053___e 1149 AACAAACGCTGGACAAATCAAAACAGGTGCTCCGTCTCGTACGGACCGTG 1198
BSNT_05129___ 1199 TTGCGAAATACAACCAGCTTCTTCGCATCGAAGATCAGTTGGCTGAAACT 1248
|.||||||||||||||..|.|||||||||||||||||.|||||||||||.
BPUM_3053___e 1199 TGGCGAAATACAACCAATTACTTCGCATCGAAGATCAATTGGCTGAAACA 1248
BSNT_05129___ 1249 GCTCAATACCACGGTATCAACTCTTTCTACAACTTAAACAAGTAA 1293
||||||||||||||.||..|..|.|||||.|||||.||.||.|||
BPUM_3053___e 1249 GCTCAATACCACGGCATTGAAACATTCTATAACTTGAATAAATAA 1293
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