Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05120 and BPUM_3045
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence dna-align/BSNT_05120___yvbG.1.24716.seq
# -bsequence dna-align/BPUM_3045.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05120___yvbG-BPUM_3045.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05120___yvbG-BPUM_3045.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05120___yvbG
# 2: BPUM_3045
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 685
# Identity: 440/685 (64.2%)
# Similarity: 440/685 (64.2%)
# Gaps: 104/685 (15.2%)
# Score: 1327.5
#
#
#=======================================
BSNT_05120___ 1 ATGTTCTCATTCATCGTTCACGTTCTCATTTCTTTATTCGCAGTATCGAA 50
.||.|.||.||.||..||||.|||.||.|.||.|||||.||.|||||.||
BPUM_3045 1 TTGATTTCCTTTATGATTCATGTTGTCGTCTCATTATTTGCTGTATCAAA 50
BSNT_05120___ 51 TCCGATCGGAAACGTACCGATATTTC-TGACGCTGACAGAAGGCTATACT 99
|||.||.||||||||||||.| |||| |.||..|.|||||.||.|||||
BPUM_3045 51 TCCCATTGGAAACGTACCGCT-TTTCATTACCTTAACAGAGGGTTATAC- 98
BSNT_05120___ 100 GCAGCGGAAAGAAA-AGCGATTGCCCGGAAGGCAGCTA------------ 136
|.||||| ||||.| ||| ||.||||||
BPUM_3045 99 -------AGAGAAAGAGCGCT--CCC---AGACAGCTAAAAAAGCCATCG 136
BSNT_05120___ 137 -------TTTTATCCT-TTTTTATTCTCGCAGCTTTTTTGTTTTTCGGTC 178
|||||| | ||||.||| ||.|||||.|| |.|
BPUM_3045 137 TGGTCTCTTTTAT--TATTTTGATT------GCCTTTTTATT-----GGC 173
BSNT_05120___ 179 A-----TCTTATCTTTAAACTGTTTGATATCAACATTCACGCGCTACGAG 223
| .||.||.||.|||.||||||..|||.|.|||||.||.||.||..
BPUM_3045 174 AGGCAGGCTCATTTTCAAATTGTTTGGGATCGATATTCATGCACTCCGCA 223
BSNT_05120___ 224 TGGCGGGCGGCATATTCATTTTCGGCATTGCCTATAATCTATTGAATGCG 273
|.||.|||||.||.||.|||||.||.||.||.||.|||.|..|||||||.
BPUM_3045 224 TCGCTGGCGGTATTTTTATTTTTGGTATCGCTTACAATTTGCTGAATGCA 273
BSNT_05120___ 274 AAAGAATCCCATGTGCAATCTCTTCA-CCATGATGAACATAAG---GAAA 319
||||||||.||.||.|||..||.||| .|| ||..|.||| ||||
BPUM_3045 274 AAAGAATCACACGTCCAAAATCCTCATTCA----GAGGAGAAGGCAGAAA 319
BSNT_05120___ 320 GCAAGGAAAAAGCGGATATATCAGTCACACCTTTATCCATTCCGATCATT 369
||||.||.||.||.|||||.||.||.||.||..|..|||||||||||||.
BPUM_3045 320 GCAAAGAGAAGGCAGATATCTCCGTTACGCCGCTCGCCATTCCGATCATC 369
BSNT_05120___ 370 GCTGGGCCCGGAACGATTGCAACAGTGATGAGCCTTT--CCGCCGGA--- 414
|||||.|||||.||.||.||.|||||.||||| ||| ||.|.|||
BPUM_3045 370 GCTGGTCCCGGGACAATCGCTACAGTCATGAG--TTTAACCCCTGGAAGT 417
BSNT_05120___ 415 CATAGCGGCATTGGTCATTATGCGGCTGTCATG------------ATCGG 452
|| ||.| ||||..| .|||| |||||
BPUM_3045 418 CA-AGAG------------ATGCTCC--ACATGTTTTCGATTCTAATCGG 452
BSNT_05120___ 453 CATAGCCGCCGTTATTGCCCTGACCT-TTCT--CTTTTTCCACTATTCTG 499
|||.|.|...|||.|||||.||||.| ||.| |||| ||.|||||..
BPUM_3045 453 CATTGTCATTGTTCTTGCCATGACGTATTATGCCTTT---CATTATTCAA 499
BSNT_05120___ 500 CTTTTATCA-GCAGCAAACTCGGAAAAACTGAGATGAATGTGATTACCAG 548
.||||||.| || |.|||.|.||.|||||.|||||||||||..|.||..|
BPUM_3045 500 GTTTTATTATGC-GAAAAATGGGGAAAACAGAGATGAATGTCGTGACGCG 548
BSNT_05120___ 549 ACTGATGGGATTAATCTTAGCCGTGGTTGCGGTCGGGATGATTGGTGCGG 598
|.|||||||||||||..|.||.||.||.||.||.|..|||||.||.||.|
BPUM_3045 549 ATTGATGGGATTAATTCTGGCTGTAGTGGCAGTTGAAATGATCGGCGCAG 598
BSNT_05120___ 599 GGCTGAAAGGCATGTTTCCGATCTTAACCTCATGA 633
|..|.|||||.|||||||||||.||.|..||||.|
BPUM_3045 599 GCTTAAAAGGGATGTTTCCGATGTTTATGTCATAA 633
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