Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04920 and BPUM_2958
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence dna-align/BSNT_04920.1.24716.seq
# -bsequence dna-align/BPUM_2958.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04920-BPUM_2958.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04920-BPUM_2958.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04920
# 2: BPUM_2958
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 128/195 (65.6%)
# Similarity: 128/195 (65.6%)
# Gaps: 36/195 (18.5%)
# Score: 476.0
#
#
#=======================================
BSNT_04920 1 GTGGCACAGGTAAGGCTAGCTGGAAATCAAGAAGAAATTGA--------- 41
.|||||||..|..|..||||.||||...||||.||.|||||
BPUM_2958 1 ATGGCACAAATTCGTTTAGCAGGAACAAAAGAGGAGATTGACCGTATTCT 50
BSNT_04920 42 ACAGCTCATTAGATCATTTGAAAAGCATTATGATGTCTCTTATACATCAA 91
|||| ||.|||||.|||||||||||.||..|.||||||||||
BPUM_2958 51 ACAG---------TCGTTTGACAAGCATTATGAAGTGACATATACATCAA 91
BSNT_04920 92 AGGAGTACGGAAGGACGAATCCAAAATACAAATATTCAAAGGATTCCCGC 141
|.||.|||||||..|||||.|||||||||||||||||.||.|||..||||
BPUM_2958 92 AAGATTACGGAAAAACGAACCCAAAATACAAATATTCGAAAGATGTCCGC 141
BSNT_04920 142 GTATATCTTGAATTAAAATTAAAATCTGCCAAGATCGAAAAATAA 186
||.|||.|||||.|||||||||||| ||
BPUM_2958 142 GTTTATATTGAACTAAAATTAAAAT-----AA------------- 168
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