Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04918 and BPUM_2957
See
Amino acid alignment /
Visit
BSNT_04918 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_04918___fumC.1.24716.seq
# -bsequence dna-align/BPUM_2957___fumC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04918___fumC-BPUM_2957___fumC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04918___fumC-BPUM_2957___fumC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04918___fumC
# 2: BPUM_2957___fumC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1415
# Identity: 1079/1415 (76.3%)
# Similarity: 1079/1415 (76.3%)
# Gaps: 46/1415 ( 3.3%)
# Score: 4071.0
#
#
#=======================================
BSNT_04918___ 1 ATG---GAATACAGAATTGAACGAGACACCATGGGAGAAGTAAAAGTTCC 47
||| ||||..|||||.|||..|||.||.|||||.|||.|.||.||.||
BPUM_2957___f 1 ATGACAGAATTTAGAATCGAAAAAGATACAATGGGCGAAATCAAGGTGCC 50
BSNT_04918___ 48 TGCTGATAAATTTTGGGGCGCCCAAACACAGCGAAGCAAGGAGAACTTTA 97
....||.||.||.|||||.||.||||||||.||||||||.||.||.||.|
BPUM_2957___f 51 AAAGGACAAGTTCTGGGGTGCACAAACACAACGAAGCAAAGAAAATTTCA 100
BSNT_04918___ 98 AGATCGGTTCTGAAAAAATGCCGATGCGTGTTGTGAAGGCGTTTGCAATC 147
|.|||||||||||.||||||||.|.|...||||||||.|||||||||||.
BPUM_2957___f 101 AAATCGGTTCTGAGAAAATGCCAAAGGAAGTTGTGAATGCGTTTGCAATT 150
BSNT_04918___ 148 TTAAAACGAAGCACTGCTCTAGCTAATAAACGCCTCGGCAATCTGGA-TG 196
||.|||||.|||||.||..|.||.||..||||.||.|||||.||.|| .|
BPUM_2957___f 151 TTGAAACGTAGCACAGCGATTGCCAACGAACGTCTTGGCAACCTTGAGAG 200
BSNT_04918___ 197 CTGAAAAAGCAGAAGCGATTGCAGCGGTTTGTGATGATGTGCTCAAAGGC 246
| ||||||||||||||.|||||..|.||.|||||.||..|..|||..||.
BPUM_2957___f 201 C-GAAAAAGCAGAAGCAATTGCTACTGTATGTGACGACATCATCAGCGGA 249
BSNT_04918___ 247 AAGTACGATGACAACTTCCCGCTTGTCGTATGGCAGACCGGAAGCGGCAC 296
|||||.||.||..|.|||||||||||.|||||||||||.||.||.||.||
BPUM_2957___f 250 AAGTATGACGAGCATTTCCCGCTTGTTGTATGGCAGACAGGTAGTGGAAC 299
BSNT_04918___ 297 ACAAAGCAATATGAACATGAACGAAGTGGTAGCCAACCGTGCGACTGCTT 346
||||||.||.|||||||||||||||||.||.||.||..|.||.|||||||
BPUM_2957___f 300 ACAAAGTAACATGAACATGAACGAAGTCGTTGCAAATAGAGCAACTGCTT 349
BSNT_04918___ 347 TATTAAAAGAGAAGAACTCTGA--TCAAACG-ATTCATCCAAATGATGAC 393
..||.|||||.||.||...||| ||| | |||||.||.|||||||||
BPUM_2957___f 350 ACTTGAAAGATAAAAATAGTGAGTTCA---GTATTCACCCGAATGATGAC 396
BSNT_04918___ 394 GTGAACCGAAGCCAAAGCTCAAACGACACATTCCCGACTGCGATGCATGT 443
||.|||||.||||||||||||||||||||||||||.|||||.|||||.||
BPUM_2957___f 397 GTCAACCGCAGCCAAAGCTCAAACGACACATTCCCAACTGCTATGCACGT 446
BSNT_04918___ 444 TGCCGCTGTTTTGGCTGTTTACGAGCAGCTTGTGCCAGCGCTTGATCAGC 493
.||.||||||||.|||||.|||.|..||.|..|.||.||..|||||
BPUM_2957___f 447 GGCAGCTGTTTTAGCTGTGTACAAAAAGTTATTACCTGCAATTGAT---- 492
BSNT_04918___ 494 TTCGCAAT--------ACACTGGATGAAAAAGCAAAAGCATA-CAATGAT 534
|||| ||.||.|||||.|||||||||||.|| ||| ||.
BPUM_2957___f 493 ----CAATTAAGAGCCACTCTTGATGAGAAAGCAAAAGCCTATCAA-GAG 537
BSNT_04918___ 535 ATTGTCAAAATCGGACGCACACATCTTCAGGATGCTACGCCACTGACCCT 584
|||||.||||||||.||.||.|||.|.||.|||||.||.||||||||..|
BPUM_2957___f 538 ATTGTGAAAATCGGTCGTACGCATTTGCAAGATGCAACACCACTGACAGT 587
BSNT_04918___ 585 CGGACAGGAAATCAGCGGATGGGTTCACATGCTGGACCGTTCGAAGGAAA 634
.|||||.|||||.|||||.|||||..||||||||||||||||.||.||||
BPUM_2957___f 588 AGGACAAGAAATTAGCGGCTGGGTGTACATGCTGGACCGTTCAAAAGAAA 637
BSNT_04918___ 635 TGATTTTGGAAGCGACAGATAAAATGCGTGCGCTTGCAATTGGTGGAACG 684
|||||.|.|||.|.||.||.||||||.|.|.||||||.|||||.|||||.
BPUM_2957___f 638 TGATTCTAGAATCAACTGAAAAAATGAGAGAGCTTGCGATTGGCGGAACA 687
BSNT_04918___ 685 GCTGTCGGAACAGGTATCAACGCCCACCCAGAGTTTGGAGAGCTTGTCTC 734
|||||.||.|||||.||.||||||||.||.||||||||..|...|||..|
BPUM_2957___f 688 GCTGTTGGTACAGGAATTAACGCCCATCCTGAGTTTGGTCAATATGTTGC 737
BSNT_04918___ 735 AGAAGAGATCACTAAGCTGACCGGCCAAACGTTCAGCAGCTCCCCGAATA 784
.||.||.||||..||||||||.||.||||..||||.....||.||.||.|
BPUM_2957___f 738 TGAGGAAATCAGCAAGCTGACAGGTCAAAATTTCAATTCTTCACCAAACA 787
BSNT_04918___ 785 AATTCCACGCGCTGACAAGCCATGACGAAATCACTTATGTGCATGGCGCA 834
|||||||.|||||.|||||||||||.|||||.||.||||..||.||.||.
BPUM_2957___f 788 AATTCCATGCGCTAACAAGCCATGATGAAATTACGTATGCACACGGTGCC 837
BSNT_04918___ 835 TTAAAAGCGCTTGCGGCTGACTTAATGAAAATCGCGAACGATGTCAGATG 884
.|||||||.|||||.|||||.|||||||||||.||.||||||||.|||||
BPUM_2957___f 838 CTAAAAGCACTTGCAGCTGATTTAATGAAAATTGCCAACGATGTGAGATG 887
BSNT_04918___ 885 GCTCGCAAGCGGACCTCGCTGCGGCATCGGGGAGATCG-TCATTCCTGAA 933
|||.|||||.||.|||||||||||.||.||.|| ||.| |||||||||||
BPUM_2957___f 888 GCTAGCAAGTGGTCCTCGCTGCGGTATTGGCGA-ATTGATCATTCCTGAA 936
BSNT_04918___ 934 AATGAGCCGGGAAGCTCTATTATGCCTGGTAAAGTCAACCCGACACAAAG 983
||||||||.|||||||||||||||||.||||||||||||||.||.|||||
BPUM_2957___f 937 AATGAGCCAGGAAGCTCTATTATGCCGGGTAAAGTCAACCCAACTCAAAG 986
BSNT_04918___ 984 CGAAGCGTTAACAATGATCGCAGCGCAAATCATGGGGAACGATGCTACAA 1033
.|||||.|||||||||||.|||||.|||||.||||||||.|||||.||.|
BPUM_2957___f 987 TGAAGCTTTAACAATGATTGCAGCACAAATTATGGGGAATGATGCAACGA 1036
BSNT_04918___ 1034 TCGGCTTTGCTGCGAGTCAGGGAAACTTTGAACTGAACGTGTTTAAGCCT 1083
||||.||||||||.||.||.|||||||||||.||||||||.||||||||.
BPUM_2957___f 1037 TCGGTTTTGCTGCCAGCCAAGGAAACTTTGAGCTGAACGTATTTAAGCCG 1086
BSNT_04918___ 1084 GTTATCATTTACAACTTCCTGCAATCTGTGCAGCTGCTCAGTGACGGCAT 1133
||.|||||.||.||||||.|.|||||.||..|..|.||...||||||.||
BPUM_2957___f 1087 GTCATCATCTATAACTTCTTACAATCAGTTGAATTACTTGCTGACGGTAT 1136
BSNT_04918___ 1134 GAATTCATTCCATGATAAATGTGCTGTCGGTATTGAGCCTAATAAAGAAA 1183
|||.|||||||||||.||.|||||.||.||.||.||.||.||...|||||
BPUM_2957___f 1137 GAACTCATTCCATGACAAGTGTGCAGTTGGAATCGAACCAAACCTAGAAA 1186
BSNT_04918___ 1184 CCATTCAGGAAAACCTGTCAAATTCATTAATGCTTGTTACGGCGCTGAAC 1233
|.|||.||.|||||.||...||||||||.||||||||.|||||.||.|||
BPUM_2957___f 1187 CAATTGAGAAAAACTTGAACAATTCATTGATGCTTGTGACGGCACTTAAC 1236
BSNT_04918___ 1234 CCGCATATCGGTTATGAAAACGCGGCGAAAATCGCCAAGCTTGCCCATAA 1283
|||||.|||||.||||||||.||.||||||||.||.||||||||.||.||
BPUM_2957___f 1237 CCGCACATCGGATATGAAAATGCAGCGAAAATTGCAAAGCTTGCTCACAA 1286
BSNT_04918___ 1284 AGAGGGATTGACGCTCAAAGAAGCAGCTTTGAAGCTTGAATT---GCTG- 1329
|||.||.||.||..|.||||||||||| .|||.|||| ||||
BPUM_2957___f 1287 AGAAGGTTTAACATTAAAAGAAGCAGC------ACTTCAATTAGAGCTGT 1330
BSNT_04918___ 1330 --ACAGAGGAGCAATTTAACGAAATGGTTAAGCCGGAAGACATGGTAAAA 1377
|||||.|||||.|||.|.||..|.||.||.||.|||||.|||||.|.|
BPUM_2957___f 1331 TAACAGAAGAGCAGTTTGAAGAGTTTGTGAAACCAGAAGAAATGGTGACA 1380
BSNT_04918___ 1378 CCAAAGGCGTAA--- 1389
||.||.||..||
BPUM_2957___f 1381 CCGAAAGCAAAATAA 1395
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.