Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04862 and BPUM_2938
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_04862___gcvH.1.24716.seq
# -bsequence dna-align/BPUM_2938___gcvH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04862___gcvH-BPUM_2938___gcvH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04862___gcvH-BPUM_2938___gcvH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04862___gcvH
# 2: BPUM_2938___gcvH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 319/384 (83.1%)
# Similarity: 319/384 (83.1%)
# Gaps: 0/384 ( 0.0%)
# Score: 1335.0
#
#
#=======================================
BSNT_04862___ 1 TTGAGCATACCAAAAGATTTGCGTTACTCAGGAGAACACGAGTGGGTAAA 50
.||||||.||||||||||||.|||||.||||.||||||.||.|||||.||
BPUM_2938___g 1 ATGAGCACACCAAAAGATTTACGTTATTCAGAAGAACATGAATGGGTCAA 50
BSNT_04862___ 51 AGTTGAAGGAGAAAAAGCCAGAATCGGAATTACGCATTTTGCCCAGTCCG 100
|||.|||||||||||.|...|.|||||.||||||||||||||.||.||.|
BPUM_2938___g 51 AGTAGAAGGAGAAAAGGTGCGTATCGGTATTACGCATTTTGCTCAATCTG 100
BSNT_04862___ 101 AACTAGGCGACATCGTGTTTGTCGAACTTCCTGAAGTGGGCGCTGAAATC 150
|.||||||||.||||||||.||.||.|||||||||||.||.|...||||.
BPUM_2938___g 101 AGCTAGGCGATATCGTGTTCGTTGAGCTTCCTGAAGTAGGAGACAAAATT 150
BSNT_04862___ 151 AAAGCGGACGAGCCATTCGGCAGTGTTGAATCCGTTAAAACGGTATCTGA 200
|.||||||||||||.|||||.|||||.|||||.||.|||||.||.|||||
BPUM_2938___g 151 ACAGCGGACGAGCCTTTCGGAAGTGTAGAATCAGTGAAAACAGTTTCTGA 200
BSNT_04862___ 201 GCTTTATGCACCGATTAACGGAACGGTTGTGGAAGTAAACGAAGATCTTG 250
||||||.||||||||.|||||.||..||||.|||||.|||||.||.||.|
BPUM_2938___g 201 GCTTTACGCACCGATCAACGGTACAATTGTTGAAGTGAACGATGAGCTGG 250
BSNT_04862___ 251 ATGACAGTCCGGAATTCGTCAACGAATCTCCGTACGAAAAAGCATGGATG 300
|||||||.||.||||||||||||||.|||||.||||||||||||||||||
BPUM_2938___g 251 ATGACAGCCCTGAATTCGTCAACGACTCTCCATACGAAAAAGCATGGATG 300
BSNT_04862___ 301 ATCGTCGTTGAGCCATCTGACGCTTCTGAAATTGAAAAACTGATGACAGC 350
|||||.||.||||||.||||..|.|||||||||||.||..|||||||.||
BPUM_2938___g 301 ATCGTGGTAGAGCCAGCTGATACATCTGAAATTGAGAACTTGATGACTGC 350
BSNT_04862___ 351 AGAGCAATACGAAGAGATGACACAAGAAGACTAA 384
.||||||||.|||||.||||||.|||||||||||
BPUM_2938___g 351 TGAGCAATATGAAGAAATGACAAAAGAAGACTAA 384
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