Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04845 and BPUM_2927
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_04845___yurY.1.24716.seq
# -bsequence dna-align/BPUM_2927___sufC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04845___yurY-BPUM_2927___sufC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04845___yurY-BPUM_2927___sufC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04845___yurY
# 2: BPUM_2927___sufC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 788
# Identity: 682/788 (86.5%)
# Similarity: 682/788 (86.5%)
# Gaps: 4/788 ( 0.5%)
# Score: 2962.0
#
#
#=======================================
BSNT_04845___ 1 ATGGCTGCTTCAACATTAACGATCAAAGATCTT-CACGTTGAAATCGAAG 49
|||.|||||||.||||||||.||.||.|| ||| ||||||||.||.||||
BPUM_2927___s 1 ATGACTGCTTCGACATTAACAATTAAGGA-CTTGCACGTTGAGATTGAAG 49
BSNT_04845___ 50 GGAAAGAGATCTTAAAGGGTGTAAACCTTGAAATAAAAGGTGGAGAATTC 99
|||||||.||||||||||||||||||||.||.||||||||||||||||||
BPUM_2927___s 50 GGAAAGAAATCTTAAAGGGTGTAAACCTCGAGATAAAAGGTGGAGAATTC 99
BSNT_04845___ 100 CACGCAGTAATGGGCCCGAACGGAACTGGTAAATCCACTTTATCAGCTGC 149
||||||||||||||.||.|||||.||.||||||||.||||||||.|||||
BPUM_2927___s 100 CACGCAGTAATGGGACCAAACGGTACAGGTAAATCAACTTTATCTGCTGC 149
BSNT_04845___ 150 TATTATGGGGCATCCTAAATATGAAGTAACAAAAGGCAGCATCACGCTTG 199
.||||||||.||.|||||||||||||||||||||||||||||...|||||
BPUM_2927___s 150 CATTATGGGTCACCCTAAATATGAAGTAACAAAAGGCAGCATTTTGCTTG 199
BSNT_04845___ 200 ACGGCAAAGATGTACTGGAGATGGAAGTGGACGAGCGTGCGCAGGCAGG- 248
|.|||.||||||||||.||.||||||||.||.|||||.||.||.|||||
BPUM_2927___s 200 ATGGCGAAGATGTACTTGAAATGGAAGTAGATGAGCGCGCTCAAGCAGGT 249
BSNT_04845___ 249 CTTATTCCTTGCGATGCAGTACCCAAGTGAAATCAGCGGTGTGACAAATG 298
||| ||||||||.|||||.||||||..||||||.||.|||||||||||||
BPUM_2927___s 250 CTT-TTCCTTGCAATGCAATACCCATCTGAAATTAGTGGTGTGACAAATG 298
BSNT_04845___ 299 CCGACTTCCTTCGCTCAGCAATCAATGCGCGCAGAGAAGAAGGCGATGAA 348
|.|||||||||||.||.||.||.||.||.|||||||||||||||||||||
BPUM_2927___s 299 CGGACTTCCTTCGTTCTGCTATTAACGCTCGCAGAGAAGAAGGCGATGAA 348
BSNT_04845___ 349 ATTTCTCTTATGAAATTCATCCGCAAAATGGACGAAAACATGGAGTTCCT 398
||||||||.|||||||||||.|||||||||||||||||||||||||||||
BPUM_2927___s 349 ATTTCTCTCATGAAATTCATTCGCAAAATGGACGAAAACATGGAGTTCCT 398
BSNT_04845___ 399 TGAAATGGACCCTGAAATGGCTCAGCGCTACCTTAACGAAGGATTCTCAG 448
||||||||||||.||.|||||.||.||||||||.||||||||.|||||||
BPUM_2927___s 399 TGAAATGGACCCAGACATGGCGCAACGCTACCTAAACGAAGGTTTCTCAG 448
BSNT_04845___ 449 GCGGGGAGAAAAAACGCAACGAAATCCTTCAATTAATGATGATTGAACCG 498
|||||||||||||||||||.|||||.|||||||||||||||||||||||.
BPUM_2927___s 449 GCGGGGAGAAAAAACGCAATGAAATTCTTCAATTAATGATGATTGAACCA 498
BSNT_04845___ 499 AAAATCGCCATCCTCGATGAAATCGACTCAGGTCTTGATATTGACGCTTT 548
|||||.||.|||||.||.||||||||.||.|||||||||||.||.||.||
BPUM_2927___s 499 AAAATTGCGATCCTTGACGAAATCGATTCTGGTCTTGATATCGATGCGTT 548
BSNT_04845___ 549 GAAAGTTGTATCAAAAGGGATCAACAAAATGCGCAGCGAAAACTTCGGCT 598
||||||.||.||.|||||.||.||||.|||||||.||||||.||||||||
BPUM_2927___s 549 GAAAGTGGTTTCTAAAGGAATTAACAGAATGCGCGGCGAAAGCTTCGGCT 598
BSNT_04845___ 599 GCCTGATGATCACTCACTATCAGCGCCTGTTAAACTACATCACTCCGGAT 648
||.|.||||||||||||||||||||.||.||.|||||||||||.||.|||
BPUM_2927___s 599 GCTTAATGATCACTCACTATCAGCGTCTATTGAACTACATCACACCAGAT 648
BSNT_04845___ 649 GTTGTTCACGTTATGATGCAAGGCCGCGTTGTAAAATCCGGCGGTGCAGA 698
..||||||.||.|||||||||||.||..|.||.|||||.|||||..||||
BPUM_2927___s 649 CATGTTCATGTCATGATGCAAGGACGTATCGTGAAATCTGGCGGACCAGA 698
BSNT_04845___ 699 GCTTGCACAGCGTCTTGAAGCAGAAGGTTATGACTGGATCAAACAAGAAC 748
|||||||||.|||||.|||||||||||.|||||.|||||.|||.||||..
BPUM_2927___s 699 GCTTGCACAACGTCTAGAAGCAGAAGGCTATGATTGGATTAAAAAAGAGT 748
BSNT_04845___ 749 TTGGCATTGAAGACGAAACTGTTGGCCAAGAAGCGTAA 786
|.||.||||||||||||||||||||.||||||||||||
BPUM_2927___s 749 TAGGAATTGAAGACGAAACTGTTGGTCAAGAAGCGTAA 786
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