Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04841 and BPUM_2923
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_04841___yurU.1.24716.seq
# -bsequence dna-align/BPUM_2923___sufB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04841___yurU-BPUM_2923___sufB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04841___yurU-BPUM_2923___sufB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04841___yurU
# 2: BPUM_2923___sufB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1400
# Identity: 1211/1400 (86.5%)
# Similarity: 1211/1400 (86.5%)
# Gaps: 4/1400 ( 0.3%)
# Score: 5275.0
#
#
#=======================================
BSNT_04841___ 1 ATGGCTAAAAAAATGCCTGATATTGGTGAATACAAGTATGG-TTTTCACG 49
|||||||||||||||||.|||.||||||||||.||.||.|| ||||| .|
BPUM_2923___s 1 ATGGCTAAAAAAATGCCAGATGTTGGTGAATATAAATACGGCTTTTC-TG 49
BSNT_04841___ 50 ACAAGGACGTTTCCATTTTCCGTTCAGAGCGCGGATTGACAAAAGAAATC 99
|.||.||||||||||||||||||||||||||||||.|.||||||||.|||
BPUM_2923___s 50 ATAAAGACGTTTCCATTTTCCGTTCAGAGCGCGGACTAACAAAAGAGATC 99
BSNT_04841___ 100 GTAGAAGAAATTTCTCGCATGAAAGAAGAGCCTCAATGGATGCTTGACTT 149
||.||||||||||||||.|||||||||||||||||.||||||||.|||||
BPUM_2923___s 100 GTTGAAGAAATTTCTCGTATGAAAGAAGAGCCTCAGTGGATGCTCGACTT 149
BSNT_04841___ 150 CCGCTTGAAATCACTTGAGCATTTCTACAATATGCCGATGCCTCAATGGG 199
|||.||||||||.||||||||.||.|||||.|||||||||||.|||||||
BPUM_2923___s 150 CCGTTTGAAATCTCTTGAGCACTTTTACAACATGCCGATGCCACAATGGG 199
BSNT_04841___ 200 GCGGAGATTTAAACTCACTGAACTTTGACGAAATTACGTACTACGTAAAA 249
|||||||||||||..||.|.||||||||.||||||||||||||||||||.
BPUM_2923___s 200 GCGGAGATTTAAATGCATTAAACTTTGATGAAATTACGTACTACGTAAAG 249
BSNT_04841___ 250 CCGTCTGAGCGTTCAGAGCGTTCTTGGGATGAAGTTCCTGAAGAAATTAA 299
||.||.||||||||.||||||||||||||||||||.||.||||||||.||
BPUM_2923___s 250 CCATCAGAGCGTTCTGAGCGTTCTTGGGATGAAGTACCAGAAGAAATCAA 299
BSNT_04841___ 300 GCAAACATTCGACAAGCTCGGTATTCCTGAAGCTGAACAAAAATACCTTG 349
.|||||.||.||.|||||.||.||.||.|||||.||.|||||.|||.|.|
BPUM_2923___s 300 ACAAACCTTTGATAAGCTTGGGATCCCAGAAGCAGAGCAAAAGTACTTAG 349
BSNT_04841___ 350 CGGGTGTTTCTGCTCAGTACGAATCTGAGGTTGTATACCACAACATGAAA 399
|.|||||.|||||||||||.||||||||.|||||.||.||.||||||||.
BPUM_2923___s 350 CAGGTGTATCTGCTCAGTATGAATCTGAAGTTGTGTATCATAACATGAAG 399
BSNT_04841___ 400 GAAGATCTTGAAGCGCAAGGCATCGTCTTTAAAGACACTGACAGCGCGCT 449
.||||.|||||||..|.||||||.||.||||||||.||.||||||||..|
BPUM_2923___s 400 CAAGACCTTGAAGATCTAGGCATTGTGTTTAAAGATACAGACAGCGCATT 449
BSNT_04841___ 450 GAAAGAGAATGAAGATATTTTCCGTGAGCACTGGGCAAAAGTAATCCCGC 499
.|||||.||.|||||.||.|||||||||||||||||||||||.||.||.|
BPUM_2923___s 450 AAAAGAAAACGAAGACATCTTCCGTGAGCACTGGGCAAAAGTCATTCCTC 499
BSNT_04841___ 500 CGACTGATAACAAGTTTGCGGCGCTTAACTCAGCTGTTTGGTCCGGCGGA 549
|||||||.|||||.|||||.|||||||||||.|||||.|||||.||.||.
BPUM_2923___s 500 CGACTGACAACAAATTTGCTGCGCTTAACTCGGCTGTATGGTCTGGTGGT 549
BSNT_04841___ 550 TCTTTCATCTACGTGCCTAAAGGCGTGAAGGTTGAAACACCGCTTCAAGC 599
||.||.||||||||.||.|||||.||.||.||.||.||.||.||||||||
BPUM_2923___s 550 TCATTTATCTACGTACCAAAAGGGGTAAAAGTAGATACTCCACTTCAAGC 599
BSNT_04841___ 600 TTACTTCCGTATCAACTCTGAGAACATGGGTCAGTTCGAACGTACACTGA 649
.||||||||||||||||||||||||||||||||||||||.||||||||||
BPUM_2923___s 600 ATACTTCCGTATCAACTCTGAGAACATGGGTCAGTTCGAGCGTACACTGA 649
BSNT_04841___ 650 TCATTGTTGACGAAGAAGCAAGCGTTCATTATGTTGAAGGCTGTACTGCG 699
||||||||||.||||..|||...||.|||||.||.|||||||||||.||.
BPUM_2923___s 650 TCATTGTTGATGAAGGCGCACATGTGCATTACGTAGAAGGCTGTACAGCA 699
BSNT_04841___ 700 CCTGTTTACACAACAAACTCACTTCACAGTGCGGTCGTTGAGATCATCGT 749
||.||||||||||||||||||||||||||||||||.|||||.||||||||
BPUM_2923___s 700 CCAGTTTACACAACAAACTCACTTCACAGTGCGGTTGTTGAAATCATCGT 749
BSNT_04841___ 750 GAAAAAAGGCGGCTACTGCCGTTATACAACGATCCAAAACTGGGCGAACA 799
|||||||||||||||||||||||||||||||||.|||||||||||.||||
BPUM_2923___s 750 GAAAAAAGGCGGCTACTGCCGTTATACAACGATTCAAAACTGGGCAAACA 799
BSNT_04841___ 800 ACGTTTACAACCTTGTAACAAAGCGTACAGTCTGTGAAGAAAACGCAACA 849
||||.|.|||||||||.||.||.||||||||.|||||||||||.|||||.
BPUM_2923___s 800 ACGTCTTCAACCTTGTGACGAAACGTACAGTATGTGAAGAAAATGCAACG 849
BSNT_04841___ 850 ATGGAATGGATCGACGGCAACATCGGTTCTAAGCTGACAATGAAATATCC 899
|||||||||||.||.||.||||||||||||||.||||||||||||||.||
BPUM_2923___s 850 ATGGAATGGATTGATGGAAACATCGGTTCTAAACTGACAATGAAATACCC 899
BSNT_04841___ 900 GGCTTGT-ATCCTAAAAGGCGAAGGCGCGCGCGGTATGACGCTTTCTATC 948
.|| .|| |||||||||||.||||||||.||.||||||||..|...|||.
BPUM_2923___s 900 AGC-GGTCATCCTAAAAGGTGAAGGCGCACGTGGTATGACATTAAGTATT 948
BSNT_04841___ 949 GCTCTTGCGGGTAAAGGCCAGCATCAGGATGCAGGTGCGAAAATGATTCA 998
||.||.||.||||||||.|||||.||.|||||||||||.|||||||||||
BPUM_2923___s 949 GCCCTAGCAGGTAAAGGTCAGCACCAAGATGCAGGTGCAAAAATGATTCA 998
BSNT_04841___ 999 CCTTGCACCAAACACATCATCTACAATCGTATCAAAATCGATTTCAAAAC 1048
||||||||||||||||||.||.||.||||||||.|||||||||||.||||
BPUM_2923___s 999 CCTTGCACCAAACACATCTTCAACGATCGTATCGAAATCGATTTCCAAAC 1048
BSNT_04841___ 1049 AGGGCGGAAAAGTAACGTACCGCGGAATCGTCCACTTCGGACGCAAAGCG 1098
|.||.||.|||||.||.||||||||||||||.|||||||||||.|||||.
BPUM_2923___s 1049 AAGGTGGTAAAGTCACATACCGCGGAATCGTTCACTTCGGACGTAAAGCA 1098
BSNT_04841___ 1099 GAAGGCGCCCGCTCTAACATCGAGTGCGATACGCTCATTATGGATAACAA 1148
||.||.||.|||||.|||||||||||.||.||.|||||.|||||||||||
BPUM_2923___s 1099 GAGGGTGCACGCTCAAACATCGAGTGTGACACACTCATCATGGATAACAA 1148
BSNT_04841___ 1149 ATCAACTTCAGACACAATTCCTTACAATGAAATCTTAAATGATAACATTT 1198
||||||.||.||.||.||.||||||||||||||||||||.||.|||||||
BPUM_2923___s 1149 ATCAACATCTGATACGATCCCTTACAATGAAATCTTAAACGACAACATTT 1198
BSNT_04841___ 1199 CATTGGAGCACGAAGCGAAAGTGTCTAAAGTATCTGAAGAGCAGCTCTTC 1248
||||.||||||||||||||.||.||.||||||||.|||||||||||.|||
BPUM_2923___s 1199 CATTAGAGCACGAAGCGAAGGTATCAAAAGTATCAGAAGAGCAGCTATTC 1248
BSNT_04841___ 1249 TACTTGATGAGCCGCGGTATTTCTGAAGAAGAAGCAACTGAAATGATCGT 1298
|||||||||||||||||.||||||||||||||||||||.|||||||||||
BPUM_2923___s 1249 TACTTGATGAGCCGCGGAATTTCTGAAGAAGAAGCAACAGAAATGATCGT 1298
BSNT_04841___ 1299 AATGGGCTTCATCGAGCCATTCACAAAAGAGCTTCCAATGGAATACGCAG 1348
.|||||||||||||||||||||||||||||.||.||||||||||||||.|
BPUM_2923___s 1299 CATGGGCTTCATCGAGCCATTCACAAAAGAACTGCCAATGGAATACGCCG 1348
BSNT_04841___ 1349 TTGAAATGAACCGTTTGATTAAGTTCGAAATGGAAGGTTCTATAGGTTAA 1398
||||||||||||||||||||||||||||.|||||||||||.||.||.|||
BPUM_2923___s 1349 TTGAAATGAACCGTTTGATTAAGTTCGAGATGGAAGGTTCAATCGGCTAA 1398
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