Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04788 and BPUM_2900

See Amino acid alignment / Visit BSNT_04788 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence dna-align/BSNT_04788___yunC.1.24716.seq
#    -bsequence dna-align/BPUM_2900.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04788___yunC-BPUM_2900.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04788___yunC-BPUM_2900.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04788___yunC
# 2: BPUM_2900
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     224/309 (72.5%)
# Similarity:   224/309 (72.5%)
# Gaps:           6/309 ( 1.9%)
# Score: 744.0
# 
#
#=======================================

BSNT_04788___      1 GTGGTAAACCTGACACCGATCATGATAGAAGGACAGCCTTTTACAGCTGT     50
                     .||||.||..|.|||||.||.|.|||.||.|||||..|.||||||||.||
BPUM_2900          1 TTGGTGAATTTAACACCTATTACGATTGATGGACATTCCTTTACAGCCGT     50

BSNT_04788___     51 GACAGTGAAACTTCCCAAAACGAATTTTATGGCCGTCGCCAATGATCACG    100
                     .||.||.|||||.||.||.||||||||||||||.||..|.|||||.||.|
BPUM_2900         51 CACCGTCAAACTGCCGAAGACGAATTTTATGGCAGTGACAAATGAACATG    100

BSNT_04788___    101 GATACATTATGTGCGGCGCGCTTGATGTGGCGCTGCTGAATGA-AAAATT    149
                     |.||.|||||||||||.||.||.|||||.|.|||..|.||||| ||..||
BPUM_2900        101 GGTATATTATGTGCGGTGCACTGGATGTCGGGCTCTTAAATGAGAAGCTT    150

BSNT_04788___    150 AAAGGAGCGCGGCATTGTTGCTGGTCGCGCAGTTGGTGTCCGCACCATTG    199
                     ..| ||..|.||||||.|.||.||..|.|||||||||||..|.||.||.|
BPUM_2900        151 GCA-GATAGAGGCATTATCGCAGGGAGAGCAGTTGGTGTGAGAACGATAG    199

BSNT_04788___    200 ACCAGCTGTTAGACGCACCTTTAGAATCCGTCACGTACGCCGC-GAAAGA    248
                     |.||..||.|.||.||.|||||||||||.||.||.|||||.|| |||..|
BPUM_2900        200 AGCAATTGCTTGATGCCCCTTTAGAATCTGTGACATACGCTGCAGAAGCA    249

BSNT_04788___    249 TCTTGGCATCAAAGTCGGTATGAGCGGCAGAGAAGCGCTT-TTAAAAATG    297
                     | |.|||||.|.||..||.|..|..||.|||||.|| ||| |||||||||
BPUM_2900        250 T-TAGGCATTACAGCTGGAACCATTGGAAGAGACGC-CTTGTTAAAAATG    297

BSNT_04788___    298 GTGAAATAA    306
                     |||||||||
BPUM_2900        298 GTGAAATAA    306


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