Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04782 and BPUM_2895

See Amino acid alignment / Visit BSNT_04782 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence dna-align/BSNT_04782___yutC.1.24716.seq
#    -bsequence dna-align/BPUM_2895.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04782___yutC-BPUM_2895.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04782___yutC-BPUM_2895.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04782___yutC
# 2: BPUM_2895
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 717
# Identity:     403/717 (56.2%)
# Similarity:   403/717 (56.2%)
# Gaps:         165/717 (23.0%)
# Score: 957.0
# 
#
#=======================================

BSNT_04782___      1 ATGAAACG-AACCGCTGTCAGCCTCTGC----CTGCTAACCGGACTATTA     45
                     |||||  | |||..|||.|||||   ||    ||.||.|.|...||.|||
BPUM_2895          1 ATGAA--GAAACAACTGACAGCC---GCAATTCTCCTCAGCATGCTTTTA     45

BSNT_04782___     46 TCCGGGTGCGGAGGCGCAGGATTGGATAATGCACAAAATGTCCGG-AATC     94
                     ..||||||||        |..||..||.|.|.|..||    |||| ||..
BPUM_2895         46 GGCGGGTGCG--------GCTTTCAATCAGGTATGAA----CCGGCAAGT     83

BSNT_04782___     95 AGACGCAGAATC--AAACCAAACCCATTCATGTGTCGGACCGCAACGAGG    142
                     .||.|.|||.||  .||..|||.||||.|...|||||||.||..|.||.|
BPUM_2895         84 GGATGAAGATTCTTCAAGTAAAACCATCCGACTGTCGGATCGTCATGAAG    133

BSNT_04782___    143 ------CTTTTAACA-GGCATAATGAGA-ACGAACA-ATTTGGCTATGTC    183
                           .||..|||| |.||.||..||| ||.|||| |...||.|||||.
BPUM_2895        134 GAAATAATTCCAACATGCCAGAAGCAGACACAAACAGAGCAGGGTATGTT    183

BSNT_04782___    184 CGCTATCAAAGAGAACAATTTGACGGAGACCAGCAGAAAACGCCGGTGAT    233
                     ||.|||||..|..|.||| .|.||||     |.||||||           
BPUM_2895        184 CGTTATCAGCGCCAGCAA-GTAACGG-----ATCAGAAA-----------    216

BSNT_04782___    234 GAACCGGGAAGAA-ACC-GCT-------------------CACATG--AT    260
                           |.||||| ||| |||                   |.||||  ||
BPUM_2895        217 ------GAAAGAACACCTGCTTTAAATCGCGAGCATCTTGCCCATGTCAT    260

BSNT_04782___    261 ATCAAGTTTAACGGTTCAGCTCCCCCATATTCAAGATGCTGCGACATTGG    310
                     ..||||||||||.||.||.||.||..|.||..|||||||.||.|||.|.|
BPUM_2895        261 TACAAGTTTAACTGTGCAACTGCCAAACATCAAAGATGCAGCCACACTTG    310

BSNT_04782___    311 TGACTGACCGA-GAAGC---GCTTGTCGTAT---ACA--AAACCGATTCT    351
                     ||||.|| .|| ||.||   |.|||| ||||   |||  ||||       
BPUM_2895        311 TGACAGA-TGAGGATGCACTGATTGT-GTATCGAACAGGAAAC-------    351

BSNT_04782___    352 AAAAACCGGGAGCTGA--CCGCCGATCAGGTGAAAAAAACAGCGGCTTCC    399
                     |||||||||||  |||  |.||||||||.||.||.|||||..|||.|||.
BPUM_2895        352 AAAAACCGGGA--TGAATCTGCCGATCAAGTAAAGAAAACGACGGTTTCT    399

BSNT_04782___    400 GTGATACCGCGATACTATCACGTGTATA--TTTCCGATAATCCAAACCAT    447
                     ||..|.||.||.||.|||||  ||||||  |.||.|||||||||.|.||.
BPUM_2895        400 GTTCTCCCTCGTTATTATCA--TGTATACGTCTCTGATAATCCAGAGCAC    447

BSNT_04782___    448 ATGCAGTCCGTCGAAAATT------------ACAGCAATCTCGGCTCTGG    485
                     .|.||.|||.|.|..||||            |.|.|||            
BPUM_2895        448 TTTCAATCCATTGCCAATTTTTCACGTCTTCAAACCAA------------    485

BSNT_04782___    486 TTCAAGGGAT----ATCAGAGAGATCATGTCGGGGACGATTCAAGAAATG    531
                     ||||.|.|||    |||    |.|||.|..||...||.||||||.|||||
BPUM_2895        486 TTCACGTGATTTTGATC----AAATCTTAACGAAAACCATTCAACAAATG    531

BSNT_04782___    532 AAAACCTCCCCGCAAGGAAGCCCTGTCTCAGAGAATGAAAATGCCAATGG    581
                     |||...|||||.|||||..|...|.|.||...|||.|||.||||      
BPUM_2895        532 AAATATTCCCCTCAAGGTGGAGATATTTCTACGAAAGAAGATGC------    575

BSNT_04782___    582 AGAAACGCGTCAGGACATGAAAATCGATAGGA--ATGACAA-AAACGCC-    627
                       |||||.|  |.|||  |||...|||..|.|  ||||.|| ||||||| 
BPUM_2895        576 --AAACGGG--ATGAC--GAATTCCGACCGTACCATGAGAAGAAACGCCC    619

BSNT_04782___    628 ----------AGATGA-    633
                               |.||.| 
BPUM_2895        620 CTTACGGCCAAAATTAA    636


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