Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04758 and BPUM_2876

See Amino acid alignment / Visit BSNT_04758 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:31
# Commandline: needle
#    -asequence dna-align/BSNT_04758___yutM.1.24716.seq
#    -bsequence dna-align/BPUM_2876.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04758___yutM-BPUM_2876.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04758___yutM-BPUM_2876.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04758___yutM
# 2: BPUM_2876
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity:     296/371 (79.8%)
# Similarity:   296/371 (79.8%)
# Gaps:          13/371 ( 3.5%)
# Score: 1179.5
# 
#
#=======================================

BSNT_04758___      1 ATGATGAGCAACCCGGTAACAATTACAGAAGCAGCAGCTTTGCATATAAA     50
                        |||||.|..||.|||||.|||||||||||.||.||..||||.||.||
BPUM_2876          1 ---ATGAGTACACCAGTAACCATTACAGAAGCTGCTGCACTGCAGATTAA     47

BSNT_04758___     51 AGATATGATGAAAGAGCATGAAGAAGAAAACGCGTTTCTGCGTGTAGGCG    100
                     |||||||||||||||.||||||||||||||.||||||||.||.||.||||
BPUM_2876         48 AGATATGATGAAAGAACATGAAGAAGAAAATGCGTTTCTACGAGTGGGCG     97

BSNT_04758___    101 TCAAAGGCGGCGGCTGCAGCGGACTTTCTTACGGCATGGGCTTTGAGCAT    150
                     |.|||||||||||.||||||||.|||||.|||||||||||||||||.|||
BPUM_2876         98 TAAAAGGCGGCGGATGCAGCGGTCTTTCATACGGCATGGGCTTTGACCAT    147

BSNT_04758___    151 GAAAAG----AGTGAATCAGACAGTGTGTTTGATCAGCACGGCA-TCACT    195
                     |  |||    ||.|||  |||||....|||.||.|||||.|||| ||| .
BPUM_2876        148 G--AAGTTTCAGAGAA--AGACACGCAGTTCGAACAGCAAGGCATTCA-G    192

BSNT_04758___    196 GTTCTAGTTGACAAAGAAAGCCTTGACATCATGAACGGCACCGTGATTGA    245
                     ||.||.||.|||...|||||||||||.|||||||||||||||.|.|||||
BPUM_2876        193 GTCCTTGTCGACTCCGAAAGCCTTGATATCATGAACGGCACCATCATTGA    242

BSNT_04758___    246 TTATAAACAATCCATGCTCGGCGGCGGCTTCACCATCGACAATCCAAACG    295
                     .|..||||||||..|..|.||||||||.|||||||||||||||||.||||
BPUM_2876        243 CTTCAAACAATCACTAATGGGCGGCGGTTTCACCATCGACAATCCGAACG    292

BSNT_04758___    296 CCATCGCTTCATGCGGCTGCGGTTCTTCGTTCAGGACAGCAACGAATGCA    345
                     |.||.||||||||.||.||.||||||||.|||||.||||||||||||.|.
BPUM_2876        293 CAATTGCTTCATGTGGATGTGGTTCTTCTTTCAGAACAGCAACGAATACC    342

BSNT_04758___    346 GGCAAGCCTGAAGAGTGCTAA    366
                     ||.|.|||.||||||||.|||
BPUM_2876        343 GGTACGCCGGAAGAGTGTTAA    363


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