Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04715 and BPUM_2865
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_04715___yuiF.1.24716.seq
# -bsequence dna-align/BPUM_2865.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04715___yuiF-BPUM_2865.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04715___yuiF-BPUM_2865.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04715___yuiF
# 2: BPUM_2865
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1347
# Identity: 973/1347 (72.2%)
# Similarity: 973/1347 (72.2%)
# Gaps: 36/1347 ( 2.7%)
# Score: 3333.5
#
#
#=======================================
BSNT_04715___ 1 ATGAATGCAGTCGTCATCGCAGTCCTGCTTATGCTTG-TATTAAGCCTGC 49
|||||||||||.||.||.||.||.||..|.||| ||| ||||||||.|||
BPUM_2865 1 ATGAATGCAGTTGTGATAGCGGTTCTTTTAATG-TTGATATTAAGCTTGC 49
BSNT_04715___ 50 TGCGTGTCAATATTGTTATCGCATTAATTATAGGCGCCTTGGCCGGCGGG 99
||||.||||||.|.|||||.||..||....|.||.||.||.||.|||||.
BPUM_2865 50 TGCGGGTCAATGTGGTTATTGCCCTAGCACTTGGTGCTTTAGCTGGCGGA 99
BSNT_04715___ 100 TTAACAGGCGGGCTCGGTCTTGGCGAAACGGTTAAAGCTTTCACAGACGG 149
.|..||||.||..|.||.|||||.|.|||.|||.||||.||.||.||.||
BPUM_2865 100 CTTGCAGGTGGATTAGGCCTTGGAGGAACAGTTGAAGCCTTTACGGATGG 149
BSNT_04715___ 150 TCTCGGCGGAAATGCCACCGTTGCAGTTAGCTATGCCATGCTTGGCGCGT 199
||||||.||||||||.||.||.||..||||.|||||..|..|.||.||.|
BPUM_2865 150 TCTCGGAGGAAATGCGACAGTGGCGATTAGTTATGCGCTATTAGGGGCAT 199
BSNT_04715___ 200 TTGCCGCCGCTTTGACGAAAACGGGTCTTCCGGACGCAATGGTGGAAGCC 249
||||.||.||..||||||||||.||||||||.|||||.|||||.||||..
BPUM_2865 200 TTGCTGCGGCGCTGACGAAAACAGGTCTTCCAGACGCCATGGTTGAAGGG 249
BSNT_04715___ 250 TCCGTTAAATTAATCGGAAATAAAGAAGATTCTCGAAAAAAAGCACTGTC 299
.|.||.||..|..|.|||||..|||..||.||..|||.||||.||.|.||
BPUM_2865 250 GCAGTGAAGCTTCTAGGAAAAGAAGGCGACTCAAGAAGAAAAACATTATC 299
BSNT_04715___ 300 TAAGGTGCTGATTGTGCTGATTATTTTAATTGTATCTTGTTTTTCGCAAA 349
.||.||.|||||..|.||..|.|||||.||.||||||||||||||.||||
BPUM_2865 300 AAAAGTACTGATCATTCTTGTGATTTTGATCGTATCTTGTTTTTCACAAA 349
BSNT_04715___ 350 ACGTCGTTCCGGTTCACATCGCGTTTATCCCGGTGCTGATTCCGCCGCTT 399
||||||||||.||||||||.||.|||||.||.||..|.||||||||..|.
BPUM_2865 350 ACGTCGTTCCAGTTCACATTGCCTTTATTCCAGTCTTAATTCCGCCATTA 399
BSNT_04715___ 400 TTGAAAATCTTTAATGAACTTGAAATGGACCGCCGTCTGATCGCGTGTGT 449
||.|||.|.|||||.||.|||.||||.||||||.|.|||.|.||||||||
BPUM_2865 400 TTAAAAGTGTTTAACGAGCTTCAAATTGACCGCAGACTGCTAGCGTGTGT 449
BSNT_04715___ 450 AATTACATTTGGCTTAACGGCTCCTTATATTTTGCTTCCGGTCGGTTTCG 499
.||.||.||.||..|.||.||.||.||||||||.|||||.||||||||.|
BPUM_2865 450 CATGACCTTCGGACTCACTGCACCATATATTTTACTTCCAGTCGGTTTTG 499
BSNT_04715___ 500 GCCAAATCTTCCAAGGCATGCTGAAGGACAATATGGCGGATGCCGGGTTA 549
|.||.||.|||||.||.|||||....||.||.|||...||.||.||.|||
BPUM_2865 500 GACAGATTTTCCACGGAATGCTTCGTGATAACATGAAAGAGGCAGGATTA 549
BSNT_04715___ 550 AACGTTCCGCTTGCTGATATTCCGTAC--GCACTGATTATTCCAGTTGCA 597
|..||.|...|..|.|||.|||| || ||..||.|||||||.||.|..
BPUM_2865 550 ACTGTACAATTATCAGATGTTCC--ACTAGCCATGCTTATTCCTGTAGGG 597
BSNT_04715___ 598 GGTATGGTTGTCGGCCTTATTTTATCAGTGATCGTATACCGTAAACCGAA 647
||.|||.|..||||.|||.||.|.|||.|..||||.||.||.|||||.|.
BPUM_2865 598 GGCATGATGCTCGGACTTCTTATTTCACTTTTCGTGTATCGGAAACCAAG 647
BSNT_04715___ 648 ACAATATGA--AACAAAAGACATTTCA--GGTGCAGAAGCATCGCCATAT 693
...|||||| |.| ||.||.||| |..|.||||..|||..|.|||
BPUM_2865 648 GGTATATGAGGATC----GAGATATCACGGACGTAGAAAAATCAGCTTAT 693
BSNT_04715___ 694 ACGAGAAAAAG--TATTGGTATCGCGGTTCTAGCCATTGTTGTGTCACTC 741
||||.|||.|| ||||| .|.||.||.||.||.||..||||.|||||.
BPUM_2865 694 ACGAAAAAGAGTTTATTG--CTTGCAGTGCTGGCTATCCTTGTTTCACTT 741
BSNT_04715___ 742 GGCGTCCAGCTTTACTTATCTC--AGACTTTGGGAGTAGAAGGAATGATT 789
...|||||||||||.||||||| ||.||| ||.||.|||||.|||||.
BPUM_2865 742 ATTGTCCAGCTTTATTTATCTCAAAGCCTT--GGTGTGGAAGGTATGATC 789
BSNT_04715___ 790 ATGGGGGCGCTCGCTGGTCTGATTGTTCTGTTTGTCAGCGGTGTGATGAA 839
.|.||.||.||.||.||.||..||||||||||||.||..||..|||||||
BPUM_2865 790 TTCGGTGCACTGGCAGGCCTTCTTGTTCTGTTTGCCACAGGCATGATGAA 839
BSNT_04715___ 840 GCGTGATGAAGCGGACTCACTGATTACTGATGGAATGGTTTTAATGGCCT 889
.||.|||||||||||..|.||.||||||...||.|||..|.|.|||||.|
BPUM_2865 840 ACGAGATGAAGCGGATGCGCTAATTACTTCCGGTATGAATATGATGGCAT 889
BSNT_04715___ 890 TTATCGGCTTTGTCATGCTTGTTGCAGCCGGGTTTTCAAACGTATTGACG 939
||||||||||||||||||||||.||.||.||||||.|.||||||||.|||
BPUM_2865 890 TTATCGGCTTTGTCATGCTTGTAGCGGCTGGGTTTGCCAACGTATTAACG 939
BSNT_04715___ 940 AAAACCGGAGATGTCGAGTCACTGGTCAAAACGTCAGCTGGTTTTATCGG 989
|||||.||||||.|.||...|||.||.|||.|.||..||...||.||.||
BPUM_2865 940 AAAACAGGAGATATTGAACAACTAGTGAAAGCATCTTCTCAGTTCATTGG 989
BSNT_04715___ 990 ACACAGTCA----GTCCTTGGGCG--CATTGCTGATGCTCATT-GTCGGC 1032
|.|||.||| || .||| |||| .|.||||| ||| ||.||.
BPUM_2865 990 AAACAATCAAAGCGT-----AGCGGCCATT-TTAATGCT-ATTAGTTGGT 1032
BSNT_04715___ 1033 TTATTAATTACAATGGGGATCGGATCTTCTTTTGCGACCATTCCTGTTAT 1082
|||.|..|.||||||||||||||.||.||.||||||||.|||||..|.||
BPUM_2865 1033 TTACTTGTGACAATGGGGATCGGTTCATCCTTTGCGACGATTCCAATCAT 1082
BSNT_04715___ 1083 CACAACCATTTTCGTGCCTCTATGCATGCAGCTTGGATTCAGCCCGATGG 1132
.|||||||||||.||.||..||||.|||||.||.|||||.|||||..|.|
BPUM_2865 1083 TACAACCATTTTTGTTCCGTTATGTATGCACCTAGGATTTAGCCCACTAG 1132
BSNT_04715___ 1133 CAACGATTGCGATTATCGGGGCTGCTGCTGCGCTTGGCGATGCCGGTTCA 1182
|.||.|||||.|||||.||..|.|||||.||..||||.|||||.||||||
BPUM_2865 1133 CTACCATTGCTATTATTGGTTCAGCTGCGGCTGTTGGGGATGCAGGTTCA 1182
BSNT_04715___ 1183 CCTGCCAGTGACAGTACGCTTGGGCCGACTTCAGGTTTGAGTGCGGACGG 1232
|||||.|||||||||||||||||.|||||.||.||.||||.|..|||.||
BPUM_2865 1183 CCTGCAAGTGACAGTACGCTTGGACCGACATCTGGATTGAATATGGATGG 1232
BSNT_04715___ 1233 CCAGCATCACCACATTTGGGATACTTGTGTGCCGACATTTATATTTTATA 1282
.|||||||||||||||||||.|||||||||.||.||.||..|||||||||
BPUM_2865 1233 ACAGCATCACCACATTTGGGGTACTTGTGTTCCAACCTTCGTATTTTATA 1282
BSNT_04715___ 1283 ATATTCCGCTTGTCATCTTTGGCTGGATTGCAGCGCTTGTTTTATAG 1329
||.|||||||||||.|.||.||||||.||||.||..||.||.|.||.
BPUM_2865 1283 ATGTTCCGCTTGTCCTATTCGGCTGGCTTGCGGCAATTATTCTTTAA 1329
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