Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04714 and BPUM_2863

See Amino acid alignment / Visit BSNT_04714 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence dna-align/BSNT_04714___yuiG.1.24716.seq
#    -bsequence dna-align/BPUM_2863___bioY.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04714___yuiG-BPUM_2863___bioY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04714___yuiG-BPUM_2863___bioY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04714___yuiG
# 2: BPUM_2863___bioY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 652
# Identity:     420/652 (64.4%)
# Similarity:   420/652 (64.4%)
# Gaps:         104/652 (16.0%)
# Score: 1156.0
# 
#
#=======================================

BSNT_04714___      1 ATGAAACAACGTAAACTTCGTGCGGGAGATATGGCGCTGATT--------     42
                     |||.||||  |.||||         .|||   ..||||||||        
BPUM_2863___b      1 ATGCAACA--GAAAAC---------AAGA---ACCGCTGATTTTGTATTA     36

BSNT_04714___     43 ---GGCATGTTCGCCGCACTTATGGCTGTCGGGGCCAACATTACATCAGT     89
                        ||.|||||.||.|||||.|||||..|.||.||.||.||.|||||..|
BPUM_2863___b     37 GTCGGAATGTTTGCTGCACTCATGGCGATTGGAGCGAATATCACATCCAT     86

BSNT_04714___     90 AGCACCCTTTTTACAAGTAGCCGGCATTCCGCTTTCGATGCAGCCGTTTT    139
                     .|.|||.||||||||.||.|.|||.|||||.|||.||||||||||.||||
BPUM_2863___b     87 TGTACCGTTTTTACAGGTCGGCGGAATTCCACTTACGATGCAGCCTTTTT    136

BSNT_04714___    140 TCTGTCT-CTTGGCTG--CTTTGCTTCTTGGCAGCAAACGAGC--AGCG-    183
                     |.||..| ||| ||||  ||||  |.||||||||   ||| ||  .||| 
BPUM_2863___b    137 TTTGCGTACTT-GCTGGTCTTT--TGCTTGGCAG---ACG-GCTTGGCGC    179

BSNT_04714___    184 ATT-GCCATGATTGTATATGCACTTG--TGGGATTGGCCGGAGCGCCTGT    230
                     ||| ||.||||||||.||||| ||||  |||.||| ||.||.||.|||||
BPUM_2863___b    180 ATTAGCGATGATTGTGTATGC-CTTGGTTGGAATT-GCTGGCGCTCCTGT    227

BSNT_04714___    231 GTTTGCTCAATTTTCAGCAGGCTTCGCACCGTTTGCAGGGAAAAGCGGCG    280
                     .||.||.||.||.|||||||||||.|....|.||..|||.||||||||.|
BPUM_2863___b    228 ATTCGCACAGTTCTCAGCAGGCTTTGGGGTGATTTTAGGCAAAAGCGGTG    277

BSNT_04714___    281 GGTTTATTATCTCATACATTCCGGCAGCATTTGC-AGCGGGATGGTTTTT    329
                     |.|||.|..|.||.||.|||||.||.|| .|.|| |||.||||...|.||
BPUM_2863___b    278 GTTTTGTCTTATCGTATATTCCTGCTGC-CTGGCTAGCTGGATTCATCTT    326

BSNT_04714___    330 AGAACGAAACATTCAGCCAAGTAAAAT--TCGATTT-----CTCATTGCT    372
                     ||||  |||     ||  |||  ||||  |.|.|||     ||..||.||
BPUM_2863___b    327 AGAA--AAA-----AG--AAG--AAATCCTGGCTTTGCCCGCTTTTTACT    365

BSNT_04714___    373 T-CACTTAT---CGGAACGGCGATCATGTATCTCATCGGCACTACCTATA    418
                     | ||..|||   .||.|||.|..||||||||||.|||||.||.||.||||
BPUM_2863___b    366 TGCAGCTATTGCTGGTACGACCGTCATGTATCTGATCGGAACGACTTATA    415

BSNT_04714___    419 TGTATCTT-GCACTGAAGCTGTGGATTCATACGCCAGTGAGCT-------    460
                     .||| ||| |||.|.||..|||||.|..||.|.||   ||..|       
BPUM_2863___b    416 CGTA-CTTCGCATTAAATGTGTGGCTGAATGCTCC---GATTTCTTATCA    461

BSNT_04714___    461 -ACGGCACGGCTTGGGGCTTTATGATTTGGTTTATGGTAAAAGA-TACAG    508
                      ||  ||||   |||..|||||||||.|||||||||||.||||| ||| |
BPUM_2863___b    462 AAC--CACG---TGGTTCTTTATGATCTGGTTTATGGTGAAAGATTAC-G    505

BSNT_04714___    509 CGCTGGCTGTGATACTGTCGTTTATCGCACCAGCAATCTACCGCTCT-AT    557
                     |..||.|..|..||||..||.|..|.|||||...|||.||.|||||| .|
BPUM_2863___b    506 CATTGACGATATTACTTGCGATGCTGGCACCTAAAATTTATCGCTCTGTT    555

BSNT_04714___    558 TCATAAAGCAACCGGCTTTAACAGAAATC-ACA-----TATCATCTACGT    601
                     ||| |||||.||...||||   .||||.| |||     .||||      |
BPUM_2863___b    556 TCA-AAAGCCACGTCCTTT---CGAAAACAACAAGCTGCATCA------T    595

BSNT_04714___    602 AA    603
                     ||
BPUM_2863___b    596 AA    597


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