Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04697 and BPUM_2862
See
Amino acid alignment /
Visit
BSNT_04697 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_04697___ald.1.24716.seq
# -bsequence dna-align/BPUM_2862___ald.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04697___ald-BPUM_2862___ald.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04697___ald-BPUM_2862___ald.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04697___ald
# 2: BPUM_2862___ald
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1162
# Identity: 849/1162 (73.1%)
# Similarity: 849/1162 (73.1%)
# Gaps: 50/1162 ( 4.3%)
# Score: 2997.0
#
#
#=======================================
BSNT_04697___ 1 ATGATCATAGGGGTTCCTAAAGAGATAAAAAACAATGAAAACCGTGTCGC 50
||||||||.||..||||.||||||||.||.||||||||||||||.||.||
BPUM_2862___a 1 ATGATCATCGGCATTCCGAAAGAGATTAAGAACAATGAAAACCGAGTGGC 50
BSNT_04697___ 51 ATTAACACCCGGGGGCGTTTCTCAGCTCATTTCAAACGGCCACCGGGTGC 100
|||||||||.||.|..|.||||||..|..|||||...||.||.|.|.|..
BPUM_2862___a 51 ATTAACACCAGGAGCAGCTTCTCAATTACTTTCAGCTGGACATCAGATTT 100
BSNT_04697___ 101 TGGTTGAAACAGGCGCGGGCCTTGGAAGCGGATT---TGAAAATGAAGCC 147
||.||||||||..|||.||..||||||||||||| || ||||.|..
BPUM_2862___a 101 TGATTGAAACAAACGCTGGTTTTGGAAGCGGATTCACTG---ATGACGAT 147
BSNT_04697___ 148 TATGAGTCAGCAGGAGCGGAAATCATTGCTGATCCGAAACAGGTCTGGGA 197
||||..||.|..||.||.|||||..|||.|.|..|||||.|.||.||||
BPUM_2862___a 148 TATGTATCTGTTGGTGCAGAAATTCTTGATCAAGCGAAAGATGTTTGGG- 196
BSNT_04697___ 198 CG----CCGAAATGGTCATGAAGGTAAAAGAACCGCTGCCGGAAGAATAT 243
|| |.||.|||.|||||||||||||||||||..|.||.||.||||||
BPUM_2862___a 197 CGTCTTCTGATATGATCATGAAGGTAAAAGAACCATTACCTGAGGAATAT 246
BSNT_04697___ 244 GTTTATTTCCGCAAAGGACTTGTGCTGTTTACGTACCTTCATTTAGCAGC 293
...||||||.|..|||||||..|..|.|||||||||||.|||.|.||.||
BPUM_2862___a 247 TCATATTTCAGAGAAGGACTCATCTTATTTACGTACCTGCATCTTGCGGC 296
BSNT_04697___ 294 TGAGCC-----TGAGCTTGCACAGGCCTTGAAGGATAAAGGAGTAACTGC 338
.||||| || ||..|.||.||.||..|.|||||.||.||.||
BPUM_2862___a 297 AGAGCCCTCCTTG-----GCTGAAGCTTTAAAACAAAAAGGCGTCACAGC 341
BSNT_04697___ 339 TATCGCATATGAAACGGTCAGTGAAGGCCGGA----CATTGCCTCTTCTG 384
|||.||.||||||| ||||.|.||.|||| ||.|.|||||..|.
BPUM_2862___a 342 TATTGCTTATGAAA----CAGTAACGGACGGAAAATCACTCCCTCTCTTA 387
BSNT_04697___ 385 ACGCCAATGTCAGAGGTTGCGGGCAGAATGGCGGCGCAAATCGGCGCTCA 434
||.||.|||||.|||||.||.||.||||||||.||.||||||||.||.||
BPUM_2862___a 388 ACACCTATGTCTGAGGTGGCAGGTAGAATGGCCGCTCAAATCGGTGCACA 437
BSNT_04697___ 435 ATTCTTAGAAAAGCCTAAAGGCGGAAAAGGCATTCTGCTTGCCGGGGTGC 484
|||.|||||||||||.||||||||.||||||||..||||.||.||.||.|
BPUM_2862___a 438 ATTTTTAGAAAAGCCAAAAGGCGGTAAAGGCATCTTGCTCGCAGGCGTAC 487
BSNT_04697___ 485 CGGGCGTTTCTCGCGGAAAAGTAACGATTATCGGAGGAGGCGTTGTCGGG 534
|.||.||.||..|.|||||.||.||||||||.||.||.||.|||||.||.
BPUM_2862___a 488 CAGGGGTATCAAGAGGAAAGGTCACGATTATAGGCGGCGGTGTTGTTGGA 537
BSNT_04697___ 535 ACAAACGCGGCGAAAATGGCTGTCGGACTCGGTGCAGATGTGACGATCAT 584
||||||||.||.||||||||..|.|||||.||.||||||||.||..|.||
BPUM_2862___a 538 ACAAACGCAGCAAAAATGGCGATTGGACTTGGCGCAGATGTCACTCTGAT 587
BSNT_04697___ 585 TGACTTAAACGCAGACCGCTTGCGCCAGCTTGATGACATC--TTCGGCCA 632
||||.||||||||||.|||||.||.|||||.||.| ||| ||.||.||
BPUM_2862___a 588 TGACGTAAACGCAGAACGCTTACGTCAGCTGGACG--ATCAATTTGGTCA 635
BSNT_04697___ 633 TCAGATTAAAACGTTAATTTCTAATCCGGTCAATATTGCTGATGCTGT-A 681
|||.||.|||||||||||.|||||.||.|||||.||.||.|||.|.|| |
BPUM_2862___a 636 TCAAATGAAAACGTTAATGTCTAACCCTGTCAACATCGCCGATTCAGTCA 685
BSNT_04697___ 682 GCGGAAGCGGATCTCCTCATTTGCGCGGTATTAATTCCGGGTGCTAAAGC 731
|| ||.||.||.||.||||||||.||.|||||.||.||.|||||.|||||
BPUM_2862___a 686 GC-GAGGCAGACCTTCTCATTTGTGCTGTATTGATCCCAGGTGCCAAAGC 734
BSNT_04697___ 732 TCCGACTCTTGTCACTGAGGAAATGGTAAAACAAATGAAACCTGGTTCAG 781
.||.||.|||||.||.||.||||||||.|||||||||||.||||||||.|
BPUM_2862___a 735 ACCAACGCTTGTGACGGAAGAAATGGTCAAACAAATGAAGCCTGGTTCCG 784
BSNT_04697___ 782 TCATTGTTGATGTAGCGATCGACCAAGGCGGCATCGTCGAAACTGTCGAC 831
||||.||.||.|||||.||.||||||||||||||.||||||||..||||.
BPUM_2862___a 785 TCATCGTAGACGTAGCCATTGACCAAGGCGGCATTGTCGAAACAATCGAT 834
BSNT_04697___ 832 CATATCACAACACATGATCAGCCAACATATGAAAAACACGGGGTTGTGCA 881
|||||||||||||||||||||||.||.||||||||||||||..||.|.||
BPUM_2862___a 835 CATATCACAACACATGATCAGCCTACTTATGAAAAACACGGTATTTTACA 884
BSNT_04697___ 882 TTATGCTGTAGCGAACATGCCGGGCGCAGTCCCTCGTACGTCAACAATCG 931
|||||||||.||.||.|||||.||.||.||.||.||.||.||.||..|.|
BPUM_2862___a 885 TTATGCTGTCGCCAATATGCCTGGAGCCGTTCCACGGACATCGACTGTTG 934
BSNT_04697___ 932 CCCTGACTAACGTTACTGTTCCATACGCGCTGCAAATCGCGAACAAAGGG 981
|..|.||.||.||.||.||||||||.|||||||||||.||..|.|||||.
BPUM_2862___a 935 CTTTAACAAATGTCACCGTTCCATATGCGCTGCAAATTGCTCATAAAGGC 984
BSNT_04697___ 982 GCAGTAAAAGC---GCTCGCAGACAATGCGGCACTG-AGAGCGGGTTTAA 1027
||...|||||| .|..|.|.||||.|| ||.|| ||| .|||.|.|
BPUM_2862___a 985 GCTTCAAAAGCTATTCAAGAAAACAAAGC--CATTGCAGA--AGGTGTGA 1030
BSNT_04697___ 1028 ACACCGCAAACGGACACGTGACCTATGAAGCTGTAGCAAGAGATCTAGGC 1077
|...|...||||||||..|.||.||||||||.||.|||.|.|||||.|||
BPUM_2862___a 1031 ATGTCATGAACGGACATATCACATATGAAGCAGTCGCACGTGATCTTGGC 1080
BSNT_04697___ 1078 TATGAGTATGTTCCTGCCGAGAAAGC--TTTACAGGATGAATCATCTGTA 1125
|||||.|||||.||||...|..|||| || ||||..||.|||.|.
BPUM_2862___a 1081 TATGATTATGTGCCTGTTCATCAAGCGATT-----GATGCGTCTTCTATG 1125
BSNT_04697___ 1126 GCGGGTGCTTAA 1137
.|.|..||||||
BPUM_2862___a 1126 ACAGAAGCTTAA 1137
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.