Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04684 and BPUM_2853

See Amino acid alignment / Visit BSNT_04684 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence dna-align/BSNT_04684___yueE.1.24716.seq
#    -bsequence dna-align/BPUM_2853.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04684___yueE-BPUM_2853.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04684___yueE-BPUM_2853.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04684___yueE
# 2: BPUM_2853
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 553
# Identity:     415/553 (75.0%)
# Similarity:   415/553 (75.0%)
# Gaps:          41/553 ( 7.4%)
# Score: 1590.5
# 
#
#=======================================

BSNT_04684___      1 ATGAGAAAGGTTACATTAATGGATGTTTTCACCCATCCAATTGCACAAAA     50
                     ||||||||||||||||||||||||||||.||||||||||.||||.|||||
BPUM_2853          1 ATGAGAAAGGTTACATTAATGGATGTTTACACCCATCCAGTTGCTCAAAA     50

BSNT_04684___     51 ATATCTTCAGCGTTCCGGCGTGGCACATGCGATTGCCTGCGCTTATCATG    100
                     ||||.|..|.|||||.||....||.|||||||||||.||.|.||||||.|
BPUM_2853         51 ATATTTAAATCGTTCAGGAAAAGCCCATGCGATTGCTTGTGGTTATCACG    100

BSNT_04684___    101 CATACAGGCTGTCTGTGAAGGCTGACATTAATCCTGATTTAGCAGCAAAA    150
                     |||.||.||||.|..|||||||||..|||||.||.|||.|.||.|..|||
BPUM_2853        101 CATTCAAGCTGGCGATGAAGGCTGGAATTAACCCAGATCTGGCTGTGAAA    150

BSNT_04684___    151 GCGGCACTGCTTCATGACATTGGCCATTATGAATGGTATACA---GACGG    197
                     ||.||.||.||.||||||||||||||||||||||||||||||   |.|||
BPUM_2853        151 GCAGCGCTCCTACATGACATTGGCCATTATGAATGGTATACAGCCGGCGG    200

BSNT_04684___    198 AAAGTGGGATTATGAGAAATACAAAAGAAATGACATTCATGCCATTAAAG    247
                     |.|.||||||||.||||.|||.|.|.|||||||.||||||||||||||||
BPUM_2853        201 AGAATGGGATTACGAGACATATAGACGAAATGATATTCATGCCATTAAAG    250

BSNT_04684___    248 GGGCGGAACGGGCGCATAAACTTCTGATTCGGCTTGGCGAGGAACCGAAA    297
                     |.||.||.|||||.||||||||.||.||.|||||.|||||||||||.|||
BPUM_2853        251 GTGCAGAGCGGGCACATAAACTACTCATACGGCTCGGCGAGGAACCAAAA    300

BSNT_04684___    298 GCAGCAAAAGAGATTGCACTAGCCATTTTGCTTCATACAGATTCCTATTT    347
                     |||||.||.||.|||||.||.||||||.|||||||||||||.||.|||||
BPUM_2853        301 GCAGCCAAGGATATTGCTCTTGCCATTCTGCTTCATACAGACTCATATTT    350

BSNT_04684___    348 GCCTGAAGGCGAATTAGATAAAAACACACTGCAGCAGATTGTCAAAAAAG    397
                     |||.||.||.||..|..||||..|||||||.||.||.|||||.||.||||
BPUM_2853        351 GCCAGAGGGTGACCTTCATAAGGACACACTCCAACAAATTGTGAAGAAAG    400

BSNT_04684___    398 CGGACGAACTGGATGAAGAGCCGGGCGGCCACCATCATTACCGCCAAATT    447
                     |.||.|||.|||||||||||||.|||||.||.|||||||||.|.|||||.
BPUM_2853        401 CAGATGAAATGGATGAAGAGCCAGGCGGGCATCATCATTACAGACAAATA    450

BSNT_04684___    448 GATCCTTCAACCGCACGAAAAAAAAT--------------AGAAA----A    479
                     |||...|||..||||...||||||||              |||||    |
BPUM_2853        451 GATGAATCACTCGCAATGAAAAAAATTGCCGATTTGGATCAGAAAGTGCA    500

BSNT_04684___    480 GCTGGACCAATTAATCGACCAAGCCCAGGCATCCGTGATAAAGC-CTGTA    528
                     ||.||  ||.||        .||||||        ||| ||.|| ||||.
BPUM_2853        501 GCAGG--CACTT--------CAGCCCA--------TGA-AACGCTCTGTT    531

BSNT_04684___    529 TAA    531
                     |||
BPUM_2853        532 TAA    534


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