Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04659 and BPUM_2835
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:26
# Commandline: needle
# -asequence dna-align/BSNT_04659___mrpG.1.24716.seq
# -bsequence dna-align/BPUM_2835___mrpG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04659___mrpG-BPUM_2835___mrpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04659___mrpG-BPUM_2835___mrpG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04659___mrpG
# 2: BPUM_2835___mrpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity: 261/390 (66.9%)
# Similarity: 261/390 (66.9%)
# Gaps: 30/390 ( 7.7%)
# Score: 799.0
#
#
#=======================================
BSNT_04659___ 1 ATGATCGAAACCGCTAAAGTCGTTGTGGCTGTATTCATTTTGCTGGGTGC 50
|||||||..|.||||||||...|.||...|.|.||||||.||||.||.||
BPUM_2835___m 1 ATGATCGTCATCGCTAAAGCTATAGTCATTTTCTTCATTCTGCTTGGCGC 50
BSNT_04659___ 51 --TC--TTGTATGCCTCATTGCTTCATTTGGCGTACTTCGCCTTCCCGAT 96
|| |||| ||.|||.||.|..||||.||.||||||||.||.|||
BPUM_2835___m 51 CATCCTTTGT----CTTATTTCTGCCATTGGTGTTCTTCGCCTGCCGGAT 96
BSNT_04659___ 97 GTGTTTACACGCGCT-CATGCTGCTTCTAAAGGCTCAACATTGGGTG--- 142
||.|.|||||| |.| ||||||||.||.||||..||.|||.|.||||
BPUM_2835___m 97 GTTTATACACG-GATGCATGCTGCATCCAAAGCATCGACACTTGGTGTTG 145
BSNT_04659___ 143 ---TCAATATGATTCTGCTTGGTGTCTTCTTCTATTTGTGGTTTGTGACG 189
|| |||| |..||||.||.|||||..|....||||||.|..|.
BPUM_2835___m 146 TCCTC-ATAT-----TAGTTGGGGTGTTCTTTCACGAATGGTTTCTTGCA 189
BSNT_04659___ 190 GGGGAAC----TCTCCGCTAAAATCCTGCTTGGGATTCTCTTTATCTTTA 235
|| | |.||.||.||.||.||.|||||||||.|||||||||||.
BPUM_2835___m 190 GG----CATTATTTCTGCGAAGATTCTACTTGGGATTGTCTTTATCTTTT 235
BSNT_04659___ 236 TTACGTCGCCTATCGGCGGGCACTTGATCTGCCGTGCTGCGTATAACTCC 285
|.||..|.||..||||.|..||.|||||..|..|.||.||.||.||..|.
BPUM_2835___m 236 TAACAGCTCCGGTCGGTGCACATTTGATTGGAAGAGCCGCCTACAATACT 285
BSNT_04659___ 286 GGCGTCAAGCTTGATGAGAGAAGCGTACAGGATGACTATAACGGAATCAG 335
||.||||||.|.||..|..||||.|||||.|||||.|||..|||..|..|
BPUM_2835___m 286 GGAGTCAAGATGGACAAACGAAGTGTACAAGATGATTATGGCGGTTTTCG 335
BSNT_04659___ 336 AAACTTTGTGATTAAACGAAAAGAGGATTCTTATTTATAA 375
.|||||.|||||||||||||||||.||.||.||.||||||
BPUM_2835___m 336 TAACTTCGTGATTAAACGAAAAGAAGACTCGTACTTATAA 375
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